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Details of SAPdb entry with Sequence ffv
Primary information
SAPdb ID 1075,
PMID22159641
Peptide NameD-FFV.
Peptide sequencefFV
N-Terminal ModificationFree
C-Terminal ModificationFree
Non-Terminal ModificationNone
Length3
Peptide/ConjuagatePeptide
Conjugate partnerNone
TechniqueCryo - Transmission Electron Microscopy (TEM), AFM (Atomic Force Microscopy), CD (Circular Dichroism spectroscopy) and FTIR (Fourier Transform Infrared) Spectroscopy (Fourier Transform Infrared) Spectroscopy
Solvent0.1M Phosphate buffer
MethodPeptide wast dissolved in a 0.1 M sodium phosphate solution at pH 12, while subsequent dilution to final physiological pH at 7.4 triigered the formation of hydrogel at room temperature within 24 hours.
Temperature7.4
TemperatureRoom temperature
Incubation Time24 hours
Year2012
Self assemblyYes
Type of Self assemblyThicker filaments and Hydrogel
Tertiary Structure
(Technique)		Not Predicted),
Linear
NA
NA
Hydrogel
NA
None
N[C@H](Cc1ccccc1)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](C(C)C)C=O
Primary information
SAPdb ID 1077,
PMID22159641
Peptide NameFFV
Peptide sequenceFFV
N-Terminal ModificationFree
C-Terminal ModificationFree
Non-Terminal ModificationNone
Length3
Peptide/ConjuagatePeptide
Conjugate partnerNone
TechniqueCryo - Transmission Electron Microscopy (TEM), AFM (Atomic Force Microscopy), CD (Circular Dichroism spectroscopy) and FTIR (Fourier Transform Infrared) Spectroscopy (Fourier Transform Infrared) Spectroscopy
Solvent0.1M Phosphate buffer
MethodPeptide wast dissolved in a 0.1 M sodium phosphate solution at pH 12, while subsequent dilution to final physiological pH at 7.4 triigered the formation of hydrogel at room temperature within 24 hours.
Temperature7.4
Year2012
Self assemblyNo
Type of Self assemblyNo self assembled structure
Tertiary Structure
(Technique)		Not Predicted),
Linear
NA
NA
None
NA
None
N[C@@H](Cc1ccccc1)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](C(C)C)C=O
Primary information
SAPdb ID 1145,
PMID24700146
Peptide NameD-Phe-Phe-Val (II),
Peptide sequencefFV
N-Terminal ModificationFree
C-Terminal ModificationFree
Non-Terminal ModificationNone
Length3
Peptide/ConjuagatePeptide
Conjugate partnerNone
TechniqueAFM (Atomic Force Microscopy), Cryo - Transmission Electron Microscopy (TEM), FTIR (Fourier Transform Infrared), CD (Circular Dichroism spectroscopy)
SolventSodium phosphate buffer
Method4.2 mg of peptide were added to 300 ml of 0.1 M sodium phosphate buffer pH 11.8 and dissolved with the aid of sonication for 5 min in a water bath at room temperature, then diluted 1 : 1 with another 300 ml of 0.1 M sodium phosphate buffer pH 5.6–5.7 to yield final pH of 7.4.
Conc7mg/ml
Temperature7.4
TemperatureRoom temperature
Year2014
Self assemblyYes
Type of Self assemblyTwisted or elongated fibril structure
Tertiary Structure
(Technique)		Not Predicted),
Linear
NA
NA
Nanofiber
NA
None
N[C@H](Cc1ccccc1)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](C(C)C)C=O
Primary information
SAPdb ID 1146,
PMID24700146
Peptide NameD-Phe-Phe-Val (II),
Peptide sequencefFV
N-Terminal ModificationFree
C-Terminal ModificationFree
Non-Terminal ModificationNone
Length3
Peptide/ConjuagatePeptide
Conjugate partnerNone
TechniqueAFM (Atomic Force Microscopy), Cryo - Transmission Electron Microscopy (TEM), FTIR (Fourier Transform Infrared), CD (Circular Dichroism spectroscopy)
SolventSodium phosphate buffer
Method4.2 mg of peptide were added to 300 ml of 0.1 M sodium phosphate buffer pH 11.8 and dissolved with the aid of sonication for 5 min in a water bath at room temperature, then diluted 1 : 1 with another 300 ml of 0.1 M sodium phosphate buffer pH 5.6–5.7 to yield final pH of 7.4.
Conc7mg/ml
Temperature7.4
TemperatureRoom temperature
Incubation Timewithin Few minutes
Year2014
Self assemblyYes
Type of Self assemblyHydrogel
Tertiary Structure
(Technique)		Not Predicted),
Linear
NA
NA
Hydrogel
NA
None
N[C@H](Cc1ccccc1)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](C(C)C)C=O
Primary information
SAPdb ID 1147,
PMID24700146
Peptide NamePhe-D-Phe-Val (III),
Peptide sequenceFfV
N-Terminal ModificationFree
C-Terminal ModificationFree
Non-Terminal ModificationNone
Length3
Peptide/ConjuagatePeptide
Conjugate partnerNone
TechniqueAFM (Atomic Force Microscopy), Cryo - Transmission Electron Microscopy (TEM), FTIR (Fourier Transform Infrared), CD (Circular Dichroism spectroscopy)
SolventSodium phosphate buffer
Method4.2 mg of peptide were added to 300 ml of 0.1 M sodium phosphate buffer pH 11.8 and dissolved with the aid of sonication for 5 min in a water bath at room temperature, then diluted 1 : 1 with another 300 ml of 0.1 M sodium phosphate buffer pH 5.6–5.7 to yield final pH of 7.4.
Conc7mg/ml
Temperature7.4
TemperatureRoom temperature
Year2014
Self assemblyYes
Type of Self assemblyFilaments with globular structure
Tertiary Structure
(Technique)		Not Predicted),
Linear
NA
NA
Other
NA
None
N[C@@H](Cc1ccccc1)C(=O)N[C@H](Cc1ccccc1)C(=O)N[C@@H](C(C)C)C=O
Primary information
SAPdb ID 1148,
PMID24700146
Peptide NamePhe-Phe-D-Val (IV)
Peptide sequenceFFv
N-Terminal ModificationFree
C-Terminal ModificationFree
Non-Terminal ModificationNone
Length3
Peptide/ConjuagatePeptide
Conjugate partnerNone
TechniqueAFM (Atomic Force Microscopy), Cryo - Transmission Electron Microscopy (TEM), FTIR (Fourier Transform Infrared), CD (Circular Dichroism spectroscopy)
SolventSodium phosphate buffer
Method4.2 mg of peptide were added to 300 ml of 0.1 M sodium phosphate buffer pH 11.8 and dissolved with the aid of sonication for 5 min in a water bath at room temperature, then diluted 1 : 1 with another 300 ml of 0.1 M sodium phosphate buffer pH 5.6–5.7 to yield final pH of 7.4.
Conc7mg/ml
Temperature7.4
TemperatureRoom temperature
Year2014
Self assemblyYes
Type of Self assemblyGlobular structure
Tertiary Structure
(Technique)		Not Predicted),
Linear
NA
NA
Other
NA
None
N[C@@H](Cc1ccccc1)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@H](C(C)C)C=O
Primary information
SAPdb ID 1149,
PMID24700146
Peptide NamePhe-D-Phe-D-Val (II)
Peptide sequenceFfv
N-Terminal ModificationFree
C-Terminal ModificationFree
Non-Terminal ModificationNone
Length3
Peptide/ConjuagatePeptide
Conjugate partnerNone
TechniqueAFM (Atomic Force Microscopy), Cryo - Transmission Electron Microscopy (TEM), FTIR (Fourier Transform Infrared), CD (Circular Dichroism spectroscopy)
SolventSodium phosphate buffer
Method4.2 mg of peptide were added to 300 ml of 0.1 M sodium phosphate buffer pH 11.8 and dissolved with the aid of sonication for 5 min in a water bath at room temperature, then diluted 1 : 1 with another 300 ml of 0.1 M sodium phosphate buffer pH 5.6–5.7 to yield final pH of 7.4.
Conc7mg/ml
Temperature7.4
TemperatureRoom temperature
Year2014
Self assemblyYes
Type of Self assemblyElongated fibres
Tertiary Structure
(Technique)		Not Predicted),
Linear
NA
NA
Nanofiber
NA
None
N[C@@H](Cc1ccccc1)C(=O)N[C@H](Cc1ccccc1)C(=O)N[C@H](C(C)C)C=O
Primary information
SAPdb ID 1150,
PMID24700146
Peptide NameD-Phe-Phe-D-Val (III)
Peptide sequencefFv
N-Terminal ModificationFree
C-Terminal ModificationFree
Non-Terminal ModificationNone
Length3
Peptide/ConjuagatePeptide
Conjugate partnerNone
TechniqueAFM (Atomic Force Microscopy), Cryo - Transmission Electron Microscopy (TEM), FTIR (Fourier Transform Infrared), CD (Circular Dichroism spectroscopy)
SolventSodium phosphate buffer
Method4.2 mg of peptide were added to 300 ml of 0.1 M sodium phosphate buffer pH 11.8 and dissolved with the aid of sonication for 5 min in a water bath at room temperature, then diluted 1 : 1 with another 300 ml of 0.1 M sodium phosphate buffer pH 5.6–5.7 to yield final pH of 7.4.
Conc7mg/ml
Temperature7.4
TemperatureRoom temperature
Year2014
Self assemblyYes
Type of Self assemblyTwisted fibril structure
Tertiary Structure
(Technique)		Not Predicted),
Linear
NA
NA
Nanofiber
NA
None
N[C@H](Cc1ccccc1)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@H](C(C)C)C=O
Primary information
SAPdb ID 1151,
PMID24700146
Peptide NameD-Phe-D-Phe-Val (IV)
Peptide sequenceffV
N-Terminal ModificationFree
C-Terminal ModificationFree
Non-Terminal ModificationNone
Length3
Peptide/ConjuagatePeptide
Conjugate partnerNone
TechniqueAFM (Atomic Force Microscopy), Cryo - Transmission Electron Microscopy (TEM), FTIR (Fourier Transform Infrared), CD (Circular Dichroism spectroscopy)
SolventSodium phosphate buffer
Method4.2 mg of peptide were added to 300 ml of 0.1 M sodium phosphate buffer pH 11.8 and dissolved with the aid of sonication for 5 min in a water bath at room temperature, then diluted 1 : 1 with another 300 ml of 0.1 M sodium phosphate buffer pH 5.6–5.7 to yield final pH of 7.4.
Conc7mg/ml
Temperature7.4
TemperatureRoom temperature
Year2014
Self assemblyYes
Type of Self assemblyCrystal needles
Tertiary Structure
(Technique)		Not Predicted),
Linear
NA
NA
Nanorod
NA
None
N[C@H](Cc1ccccc1)C(=O)N[C@H](Cc1ccccc1)C(=O)N[C@@H](C(C)C)C=O
Primary information
SAPdb ID 1152,
PMID24700146
Peptide NamePhe-Phe-Val (I)
Peptide sequenceFFV
N-Terminal ModificationFree
C-Terminal ModificationFree
Non-Terminal ModificationNone
Length3
Peptide/ConjuagatePeptide
Conjugate partnerNone
TechniqueAFM (Atomic Force Microscopy), Cryo - Transmission Electron Microscopy (TEM), FTIR (Fourier Transform Infrared), CD (Circular Dichroism spectroscopy)
SolventSodium phosphate buffer
Method4.2 mg of peptide were added to 300 ml of 0.1 M sodium phosphate buffer pH 11.8 and dissolved with the aid of sonication for 5 min in a water bath at room temperature, then diluted 1 : 1 with another 300 ml of 0.1 M sodium phosphate buffer pH 5.6–5.7 to yield final pH of 7.4.
Conc7mg/ml
Temperature7.4
TemperatureRoom temperature
Year2014
Self assemblyNo
Type of Self assemblyDisordered structure
Tertiary Structure
(Technique)		Not Predicted),
Linear
NA
NA
None
NA
None
N[C@@H](Cc1ccccc1)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](C(C)C)C=O
Primary information
SAPdb ID 1153,
PMID24700146
Peptide NameD-Phe-D-Phe-D-Val (I)
Peptide sequenceffv
N-Terminal ModificationFree
C-Terminal ModificationFree
Non-Terminal ModificationNone
Length3
Peptide/ConjuagatePeptide
Conjugate partnerNone
TechniqueAFM (Atomic Force Microscopy), Cryo - Transmission Electron Microscopy (TEM), FTIR (Fourier Transform Infrared), CD (Circular Dichroism spectroscopy)
SolventSodium phosphate buffer
Method4.2 mg of peptide were added to 300 ml of 0.1 M sodium phosphate buffer pH 11.8 and dissolved with the aid of sonication for 5 min in a water bath at room temperature, then diluted 1 : 1 with another 300 ml of 0.1 M sodium phosphate buffer pH 5.6–5.7 to yield final pH of 7.4.
Conc7mg/ml
Temperature7.4
TemperatureRoom temperature
Year2014
Self assemblyNo
Type of Self assemblyDisordered structure
Tertiary Structure
(Technique)		Not Predicted),
Linear
NA
NA
None
NA
None
N[C@H](Cc1ccccc1)C(=O)N[C@H](Cc1ccccc1)C(=O)N[C@H](C(C)C)C=O