Detailed description page of PRRDB2.0

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PRRID_1837 details
Primary information
PRRIDPRRID_1837
Ligand NamePam3CSk4
SourceBacteria
Sequence of ligandCCCCCCCCCCCCCCCC(=O)NC(CSCC(COC(=O)CCCCCCCCCCCCCCC)OC(=O)CCCCCCCCCCCCCCC)C(=O)NC(CO)C(=O)NC(CCCCN)C(=O)NC(CCCCN)C(=O)NC(CCCCN)C(=O)NC(CCCCN)C(=O)O
LengthNA
TypePattern-associated molecular patterns (PAMPs)
OccurenceNatural
Role of LigandImmunostimulant
Name of receptorToll-like receptor 2 (TLR2)
Type of receptorToll-like receptor (TLR)
Source Zebrafish
LocalizationPlasma membrane
Domainextracellular (or intra- endosomal) ligand-binding domain with a leucine-rich repeat (LRR) motif and a cytoplasmic signaling Toll/Interleukin-1 (IL-1) receptor homology (TIR) domain
Sequence of ReceptorF1QWS9.fasta
Swiss prot IDF1QWS9
Length Of Receptor818
Functioninduce IFN expression
Assay usedNA
PMID27721456
Year of Publication2016
Pubchem assayPubchem_assay
Primary information
PRRIDPRRID_1837
Ligand NamePam3CSk4
SourceBacteria
Sequence of ligandCCCCCCCCCCCCCCCC(=O)NC(CSCC(COC(=O)CCCCCCCCCCCCCCC)OC(=O)CCCCCCCCCCCCCCC)C(=O)NC(CO)C(=O)NC(CCCCN)C(=O)NC(CCCCN)C(=O)NC(CCCCN)C(=O)NC(CCCCN)C(=O)O
LengthNA
TypePattern-associated molecular patterns (PAMPs)
OccurenceNatural
Role of LigandImmunostimulant
Name of receptorToll-like receptor 2 (TLR2)
Type of receptorToll-like receptor (TLR)
Source Zebrafish
LocalizationPlasma membrane
Domainextracellular (or intra- endosomal) ligand-binding domain with a leucine-rich repeat (LRR) motif and a cytoplasmic signaling Toll/Interleukin-1 (IL-1) receptor homology (TIR) domain
Sequence of ReceptorF1QWS9.fasta
Swiss prot IDF1QWS9
Length Of Receptor818
Functioninduce IFN expression
Assay usedNA
PMID27721456
Year of Publication2016
Pubchem assayPubchem_assay