Detailed description page of PRRDB2.0
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PRRID_1783 details |
| Primary information | |
|---|---|
| PRRID | PRRID_1783 |
| Ligand Name | Lipopolysaccharide (LPS) |
| Source | Gram-negative bacteria Escherichia coli, Vibrio anguillarum |
| Sequence of ligand | CCCCCCCCCCCCCC(=O)OC(CCCCCCCCCCC)CC(=O)OC1C(C(OC(C1OP(=O)(O)O)CO)OCC2C(C(C(C(O2)OP(=O)(O)O)NC(=O)CC(CCCCCCCCCCC)O)OC(=O)CC(CCCCCCCCCCC)O)O)NC(=O)CC(CCCCCCCCCCC)OC(=O)CCCCCCCCCCC |
| Length | NA |
| Type | Lipopolysaccharide (LPS) |
| Occurence | Natural |
| Role of Ligand | Bacterial infection and immunostimulant |
| Name of receptor | CgPGRPS2 |
| Type of receptor | Peptidoglycan Recognition Receptor (PGRPs) |
| Source | Crassostrea gigas |
| Localization | Cytoplasm |
| Domain | one typical PGRP/amidase domain |
| Sequence of Receptor | NA |
| Swiss prot ID | NA |
| Length Of Receptor | NA |
| Function | Activate NF-kB |
| Assay used | PAMPs binding assay |
| PMID | 28042081 |
| Year of Publication | 2016 |
| Pubchem assay | NA |
| Primary information | |
|---|---|
| PRRID | PRRID_1783 |
| Ligand Name | Lipopolysaccharide (LPS) |
| Source | Gram-negative bacteria Escherichia coli, Vibrio anguillarum |
| Sequence of ligand | CCCCCCCCCCCCCC(=O)OC(CCCCCCCCCCC)CC(=O)OC1C(C(OC(C1OP(=O)(O)O)CO)OCC2C(C(C(C(O2)OP(=O)(O)O)NC(=O)CC(CCCCCCCCCCC)O)OC(=O)CC(CCCCCCCCCCC)O)O)NC(=O)CC(CCCCCCCCCCC)OC(=O)CCCCCCCCCCC |
| Length | NA |
| Type | Lipopolysaccharide (LPS) |
| Occurence | Natural |
| Role of Ligand | Bacterial infection and immunostimulant |
| Name of receptor | CgPGRPS2 |
| Type of receptor | Peptidoglycan Recognition Receptor (PGRPs) |
| Source | Crassostrea gigas |
| Localization | Cytoplasm |
| Domain | one typical PGRP/amidase domain |
| Sequence of Receptor | NA |
| Swiss prot ID | NA |
| Length Of Receptor | NA |
| Function | Activate NF-kB |
| Assay used | PAMPs binding assay |
| PMID | 28042081 |
| Year of Publication | 2016 |
| Pubchem assay | NA |