Detailed description page of PRRDB2.0

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PRRID_1768 details
Primary information
PRRIDPRRID_1768
Ligand NameLipopolysaccharide (LPS)
SourceBacteria
Sequence of ligandCCCCCCCCCCCCCC(=O)OC(CCCCCCCCCCC)CC(=O)OC1C(C(OC(C1OP(=O)(O)O)CO)OCC2C(C(C(C(O2)OP(=O)(O)O)NC(=O)CC(CCCCCCCCCCC)O)OC(=O)CC(CCCCCCCCCCC)O)O)NC(=O)CC(CCCCCCCCCCC)OC(=O)CCCCCCCCCCC
LengthNA
TypeLipopolysaccharide (LPS)
OccurenceNatural
Role of LigandImmunostimulant
Name of receptorCnToll-like receptor 1 (TLR-1)
Type of receptorToll-like receptor (TLR)
Source Chlamys nobilis
Localizationmantle, he- mocytes, gill, kidney, gonad, hepatopancreas
Domainfive leucine-rich repeats (LRR), two LRR-C-terminal (LRRCT) motifs and a LRR-N-terminal (LRRNT) motif in the extracellular domain, a transmembrane domain and a Toll/Interleukin-1 Receptor (TIR) of 138
Sequence of ReceptorNA
Swiss prot IDNA
Length Of ReceptorNA
Functionbinds to microbes and act as PRR.
Assay usedqRT-PCR
PMID27403592
Year of Publication2016
Pubchem assayNA
Primary information
PRRIDPRRID_1768
Ligand NameLipopolysaccharide (LPS)
SourceBacteria
Sequence of ligandCCCCCCCCCCCCCC(=O)OC(CCCCCCCCCCC)CC(=O)OC1C(C(OC(C1OP(=O)(O)O)CO)OCC2C(C(C(C(O2)OP(=O)(O)O)NC(=O)CC(CCCCCCCCCCC)O)OC(=O)CC(CCCCCCCCCCC)O)O)NC(=O)CC(CCCCCCCCCCC)OC(=O)CCCCCCCCCCC
LengthNA
TypeLipopolysaccharide (LPS)
OccurenceNatural
Role of LigandImmunostimulant
Name of receptorCnToll-like receptor 1 (TLR-1)
Type of receptorToll-like receptor (TLR)
Source Chlamys nobilis
Localizationmantle, he- mocytes, gill, kidney, gonad, hepatopancreas
Domainfive leucine-rich repeats (LRR), two LRR-C-terminal (LRRCT) motifs and a LRR-N-terminal (LRRNT) motif in the extracellular domain, a transmembrane domain and a Toll/Interleukin-1 Receptor (TIR) of 138
Sequence of ReceptorNA
Swiss prot IDNA
Length Of ReceptorNA
Functionbinds to microbes and act as PRR.
Assay usedqRT-PCR
PMID27403592
Year of Publication2016
Pubchem assayNA