Detailed description page of PRRDB2.0

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PRRID_1407 details
Primary information
PRRIDPRRID_1407
Ligand NameLipopolysaccharide (LPS)
SourceGram negative Bacteria (Bacteria)
Sequence of ligandCCCCCCCCCCCCCC(=O)OC(CCCCCCCCCCC)CC(=O)OC1C(C(OC(C1OP(=O)(O)O)CO)OCC2C(C(C(C(O2)OP(=O)(O)O)NC(=O)CC(CCCCCCCCCCC)O)OC(=O)CC(CCCCCCCCCCC)O)O)NC(=O)CC(CCCCCCCCCCC)OC(=O)CCCCCCCCCCC
LengthNA
TypeLipopolysaccharide (LPS)
OccurenceNatural
Role of Ligandinduce inflammation
Name of receptorToll-like receptor 4 (TLR4)
Type of receptorToll-like receptor (TLR)
Source Endotoxemic Mice
LocalizationMacrophages
Domaincell surface
Sequence of ReceptorQ9QUK6.fasta
Swiss prot IDQ9QUK6
Length Of Receptor835
FunctionTLR4 recognizes LPS and causes cell activation, including the production of NO and proinflammatory cytokines such as TNF-α and IL-6
Assay usedqRT-PCR, immunofluorescence assay, western blot
PMID24802390
Year of Publication2014
Pubchem assayPubchem_assay
Primary information
PRRIDPRRID_1407
Ligand NameLipopolysaccharide (LPS)
SourceGram negative Bacteria (Bacteria)
Sequence of ligandCCCCCCCCCCCCCC(=O)OC(CCCCCCCCCCC)CC(=O)OC1C(C(OC(C1OP(=O)(O)O)CO)OCC2C(C(C(C(O2)OP(=O)(O)O)NC(=O)CC(CCCCCCCCCCC)O)OC(=O)CC(CCCCCCCCCCC)O)O)NC(=O)CC(CCCCCCCCCCC)OC(=O)CCCCCCCCCCC
LengthNA
TypeLipopolysaccharide (LPS)
OccurenceNatural
Role of Ligandinduce inflammation
Name of receptorToll-like receptor 4 (TLR4)
Type of receptorToll-like receptor (TLR)
Source Endotoxemic Mice
LocalizationMacrophages
Domaincell surface
Sequence of ReceptorQ9QUK6.fasta
Swiss prot IDQ9QUK6
Length Of Receptor835
FunctionTLR4 recognizes LPS and causes cell activation, including the production of NO and proinflammatory cytokines such as TNF-α and IL-6
Assay usedqRT-PCR, immunofluorescence assay, western blot
PMID24802390
Year of Publication2014
Pubchem assayPubchem_assay