Detailed description page of PRRDB2.0

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PRRID_0608 details
Primary information
PRRIDPRRID_0608
Ligand NameLipopolysaccharide (LPS)
SourceBacteria
Sequence of ligandCCCCCCCCCCCCCC(=O)OC(CCCCCCCCCCC)CC(=O)OC1C(C(OC(C1OP(=O)(O)O)CO)OCC2C(C(C(C(O2)OP(=O)(O)O)NC(=O)CC(CCCCCCCCCCC)O)OC(=O)CC(CCCCCCCCCCC)O)O)NC(=O)CC(CCCCCCCCCCC)OC(=O)CCCCCCCCCCC
LengthNA
TypeLipopolysaccharide (LPS)
OccurenceNatural
Role of LigandK63-linked ubiquitination of Beclin1 using TRAF6 and A20 and triggered autophagy
Name of receptorToll-like receptor 4 (TLR4)
Type of receptorToll-like receptor (TLR)
Source Mice (Murine)
LocalizationPlasma Membrane
DomainLeucine-rich Repeat (LRR) Domain
Sequence of ReceptorQ9QUK6.fasta
Swiss prot IDQ9QUK6
Length Of Receptor835
FunctionIt leads to autophagy and hence clearance of the pathogen
Assay usedNA
PMID20798608
Year of Publication2010
Pubchem assayPubchem Assay
Primary information
PRRIDPRRID_0608
Ligand NameLipopolysaccharide (LPS)
SourceBacteria
Sequence of ligandCCCCCCCCCCCCCC(=O)OC(CCCCCCCCCCC)CC(=O)OC1C(C(OC(C1OP(=O)(O)O)CO)OCC2C(C(C(C(O2)OP(=O)(O)O)NC(=O)CC(CCCCCCCCCCC)O)OC(=O)CC(CCCCCCCCCCC)O)O)NC(=O)CC(CCCCCCCCCCC)OC(=O)CCCCCCCCCCC
LengthNA
TypeLipopolysaccharide (LPS)
OccurenceNatural
Role of LigandK63-linked ubiquitination of Beclin1 using TRAF6 and A20 and triggered autophagy
Name of receptorToll-like receptor 4 (TLR4)
Type of receptorToll-like receptor (TLR)
Source Mice (Murine)
LocalizationPlasma Membrane
DomainLeucine-rich Repeat (LRR) Domain
Sequence of ReceptorQ9QUK6.fasta
Swiss prot IDQ9QUK6
Length Of Receptor835
FunctionIt leads to autophagy and hence clearance of the pathogen
Assay usedNA
PMID20798608
Year of Publication2010
Pubchem assayPubchem Assay