Detailed description page of PRRDB2.0

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PRRID_0309 details
Primary information
PRRIDPRRID_0309
Ligand NameLipopolysaccharide (LPS)
SourceEscherichia coli (055:B5) (Bacteria)
Sequence of ligandCCCCCCCCCCCCCC(=O)OC(CCCCCCCCCCC)CC(=O)OC1C(C(OC(C1OP(=O)(O)O)CO)OCC2C(C(C(C(O2)OP(=O)(O)O)NC(=O)CC(CCCCCCCCCCC)O)OC(=O)CC(CCCCCCCCCCC)O)O)NC(=O)CC(CCCCCCCCCCC)OC(=O)CCCCCCCCCCC
LengthNA
TypeLipopolysaccharide (LPS)
OccurenceNatural
Role of LigandIt leads to the activation of the transcription factor nuclear factor kappa B (NFKB) in caput and cauda epididymides.
Name of receptorToll-like receptor 4 (TLR4)
Type of receptorToll-like receptor (TLR)
Source Rat
LocalizationEpididymis
DomainLRR
Sequence of ReceptorNA
Swiss prot IDNA
Length Of ReceptorNA
FunctionRat epididymis is fully capable of initiating an inflammatory response to lipopolysaccharide (LPS) from Escherichia coli through activation of Tolllike receptor 4.
Assay usedEMSA
PMID18703421
Year of Publication2008
Pubchem assayNA
Primary information
PRRIDPRRID_0309
Ligand NameLipopolysaccharide (LPS)
SourceEscherichia coli (055:B5) (Bacteria)
Sequence of ligandCCCCCCCCCCCCCC(=O)OC(CCCCCCCCCCC)CC(=O)OC1C(C(OC(C1OP(=O)(O)O)CO)OCC2C(C(C(C(O2)OP(=O)(O)O)NC(=O)CC(CCCCCCCCCCC)O)OC(=O)CC(CCCCCCCCCCC)O)O)NC(=O)CC(CCCCCCCCCCC)OC(=O)CCCCCCCCCCC
LengthNA
TypeLipopolysaccharide (LPS)
OccurenceNatural
Role of LigandIt leads to the activation of the transcription factor nuclear factor kappa B (NFKB) in caput and cauda epididymides.
Name of receptorToll-like receptor 4 (TLR4)
Type of receptorToll-like receptor (TLR)
Source Rat
LocalizationEpididymis
DomainLRR
Sequence of ReceptorNA
Swiss prot IDNA
Length Of ReceptorNA
FunctionRat epididymis is fully capable of initiating an inflammatory response to lipopolysaccharide (LPS) from Escherichia coli through activation of Tolllike receptor 4.
Assay usedEMSA
PMID18703421
Year of Publication2008
Pubchem assayNA