Resources Related to Peptide Metabolism

The table below lists databases and tools related to metabolism and half-life of peptides
HLPA webserver for predicting half-life of peptides in intestine like environment.
PeptideCutterIt predicts potential cleavage sites cleaved by proteases or chemicals in a given protein sequence.
PROSPERA tool for in silico identification of protease cleavage sites.
ProtParamAn in silico tool which computes estimated half-life.
SitePrediction This tool helps to predict the cleavage site of a protease.
MEROPSIts an information resource for peptidases (also termed proteases, proteinases and proteolytic enzymes) and the proteins that inhibit them.

Other Resources Related to Peptides

The table below lists databases and tools related to bioactive peptides
ToxinPredIn Silico Approach for Predicting Toxicity of Peptides and Proteins.
CellPPDAn in silico method, which is developed to predict and design efficient cell penetrating peptides (CPPs).
TumorHPDA server for the predicting and designing tumor homing peptides.
AntiCPA web based prediction server for Anticancer peptides.
AntiBP2 An improved version of AntiBP.
AVPpred Collection and Prediction of Antiviral Peptides.
PepstrThe Pepstr server predicts the tertiary structure of small peptides with sequence length varying between 7 to 25 residues.
PEP-FOLD ServerPEP-FOLD is a de novo approach aimed at predicting peptide structures from amino acid sequences.
PEP-SiteFinderA service to identify candidate protein-peptide interaction sites.
BAGELPrediction of Bacteriocins in prokaryotes.
APD2The updated antimicrobial peptide database and its application in peptide design.
CybaseThis site is dedicated to the study of a fascinating new class of proteins that possess a cyclic backbone in which the N and C termini have been joined with a conventional amide bond.
Defensins KnowledgebaseThe defensins knowledgebase is a manually curated database and information source devoted to the defensin family of antimicrobial peptides.
CPPsiteCPPsite is a database of experimentally validated Cell Penetrating Peptides (10-30 amino acids).
TumorHopeTumorHoPe is a manually curated comprehensive database containing 744 entries of experimentally characterized tumor homing peptides.
ParaPepIt is a manually curated repository of experimentally validated anti-parasitic peptides and their structures.
HemolytikHemolytik is a manually curated database of experimentally validated Hemolytic and Non-hemolytic peptides.
AVPdbAVPdb is the first comprehensive database of Antiviral Peptides (AVPs) targeting about 60 medically important viruses.
HIPdbHIPdb is a manually curated database of experimentally validated HIV inhibitory peptides targeting various steps or proteins involved in the life cycle of HIV like fusion, integration, reverse transcription etc.
DADPDatabase of Anuran Defense Peptides. It currently contains 2571 entries with a total of 1923 different bioactive sequences, of which 921 peptides have the minimum inhibiting concentration (MIC) against at least one microorganism.
MilkAMPMilkAMP contains valuable information on antimicrobial dairy peptides, including microbiological and physicochemical data.
LAMPLAMP, a database linking AMPs, is an integrated open-access database. It has been created with an objective to provide a useful resource and tools for AMP studies. AMPs in LAMP are short, of less than 100 amino acid residues and include natural, synthetic and predicted AMPs. AMPs in LAMP had been grouped into three catalogs by data source: experimental, predicted, and patent. This manually curated database currently holds 5547 AMP sequences, including 3904 natural and 1643 synthetic AMPs.
QuorumpepsIt is a resource of quorum sensing signalling peptides.