Databases in MAP Format


Bridging the gap between diverse biological databases and the MAP format.


The MAP format is designed to enhance protein data representation by incorporating rich annotations. To facilitate the adoption of MAP and enable its use across various research areas, we are converting data from several important biological databases into the MAP format. This section details the databases we have processed.

Jump to: Existing MAP Comaptible Databases Important Biological Databases in MAP format

Existing MAP Comaptible Databases

We are converting data from the following databases into the MAP format:

Database Description Availability
Hemolytik 2.0 A database of hemolytic peptides. Click Here
TumorHOPE 2.0 A database of tumor homing peptides. Click Here
PepLIFE 2.0 A database of bioactive peptides. Click Here
CancerPPD 2.0 A database of anticancer peptides. Click Here

Important Biological Databases in MAP format

The MAP format enhances the traditional FASTA format by embedding both residue-level and protein-level annotations directly within protein sequences. This allows for the incorporation of vital information such as post-translational modifications, non-natural residues, and mutation data. By representing such complex details within the sequence, MAP format enables more comprehensive and informative biological data storage, retrieval, and analysis while maintaining compatibility with existing FASTA tools. These enriched protein sequences are crucial for a more accurate understanding of protein functions and interactions in various biological contexts.

Database Description Availability
PDB A repository of 3D structural data of large biological molecules such as proteins and nucleic acids. Click Here
SwissPROT A manually curated section of the UniProt Knowledgebase. Click Here
IEDB Hosts experimental data on immune epitopes related to infectious diseases, allergy, autoimmunity, and transplantation. Click Here