Voltage gated ion channel prediction server

The aim of VGIchan server is to predict voltage gated ion channels and classify them into sodium, potassium, calcium and chloride ion channels from primary amino acid sequence using SVM method based on composition , PSI-Blast and HMM . Please cite "Saha, S., Zack, J., Singh, B. and Raghava, G. P. S. (2007) VGIchan: Prediction and classification of voltage-gated ion channels. Genomics Proteomics & Bioinformatics (In Press)"

Submission Form Protein sequence Name[optional]
Paste protein sequence in plain or standard format Or Upload Sequence File: Select Sequence Format:
Select Types of Prediction Prediction of ion-channels Classification of ion channels Choose Prediction Approach SVM method based on amino acid Composition SVM method based on dipeptide composition PSI-Blast HMM

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Voltage gated ion channel prediction server

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