PLDbench
Benchmarking of docking software on peptide-ligand complexes
Home
SINGLE
BENCHMARK
COMPARE
Datasets
Help
Team
Contact Us
Welcome to COMPARE Module
Compare two docking poses
We have designed this COMPARE module in order to facilitate the scientific community. This module is independent of our benchmarking study. Unlike, SINGLE and BENCHMARK, here users need to upload original pose as well as the docked pose of a ligand, predicted by any of the docking methods. Users can upload both of the poses in any of three file formats provided in this module. After submitting job, it gives the RMSD value between original and docked pose of a ligand as a result. For more information visit
help page
Upload Original Pose :
(
Example
)
Upload Docked Pose :
(
Example
)
Type of File:
PDB
MOL2
SDF
Type of RMSD:
Standard RMSD
Symmetry-corrected RMSD
Minimum-distance RMSD
OSDDlinux
Raghava's Group
IMTECH
CSIR
CRDD