The total number entries retrieved from this search are 115

ID	Resource Name	Resource Description	Resource Link	Journal	Class	Source	Year of Publication	PMID	Corresponding Author	Email	Institute	City	State	Functional Status	Funding Agency	Resource category	Other Repository
1003	nifPred	Proteome-Wide Identification and Categorization of Nitrogen-Fixation Proteins of Diaztrophs Based on Composition-Transition-Distribution Features Using Support Vector Machine	http://webapp.cabgrid.res.in/nifPred	Frontiers in Microbiology	Protein Function	Protein	2018	29896173	A R Rao	rao.cshl.work@gmail.com	ICAR - Indian Agricultural Statistics Research Institute (IASRI)	New Delhi	New Delhi	ICAR	Functional	Prediction	NA
1005	DIRProt	A computational approach for discriminating insecticide resistant proteins from non-resistant proteins	http://cabgrid.res.in:8080/dirprot/	BMC Bioinformatics	Protein Function	Protein	2017	28340571	A R Rao	rao.cshl.work@gmail.com	ICAR - Indian Agricultural Statistics Research Institute (IASRI)	New Delhi	New Delhi	ICAR	Functional	Prediction	NA
1014	PPDB	A tool for investigation of plants physiology based on gene ontology	http://www.iitr.ernet.in/ajayshiv/	Interdisciplinary Sciences: Computational Life Sciences	Protein Function	DNA	2015	25183354	Ajay Shiv Sharma	2ajayshiv@gmail.com	Indian Institute of Technology (IIT R)	Roorkee	Uttarakhand	IIT	Functional	Database	NA
1017	Human Protein Reference Database	Database of curated proteomic information pertaining to human proteins	http://www.hprd.org/	Nucleic Acids Research	Protein Function	Protein	2009	18988627	Akhilesh Pandey	pandey@jhmi.edu	Institute of Bioinformatics (IOB)	Bangalore	Karnataka	IOB	Functional	Database	NA
1022	PHYSICO2	An UNIX based standalone procedure for computation of physicochemical, window-dependent and substitution based evolutionary properties of protein sequences along with automated block preparation tool, version 2	http://sourceforge.net/projects/physico2/	Bioinformation	Protein Function	Protein	2015	26339154	Amal Kumar Bandyopadhyay	akbanerjee@biotech.buruniv.ac.in	The University of Burdwan	Burdwan	West Bengal	Other	Functional	Prediction	bio.tools
1032	RiceMetaSys	Provides comprehensive information on salt responsive genes (SRGs) and drought responsive genes (DRGs) across genotypes, crop development stages and tissues, identified from multiple microarray datasets	http://14.139.229.201	BMC Bioinformatics	Genomics Protein Function	DNA	2017	28964253	Amitha Mithra S V	amithamithra.nrcpb@gmail.com	ICAR - National Research Centre on Plant Biotechnology (NRCPB)	New Delhi	New Delhi	ICAR	Functional	Database	NA
1033	SPGDB	Database for strain specific comparative analysis of Streptococcus pneumoniae genes and proteins	http://pranag.physics.iisc.ernet.in/SPGDB/	Genomics	Protein Function	Protein	2014	25269378	Anand Anbarasu	aanand@vit.ac.in	VIT University	Vellore	Tamil Nadu	VIT	Functional	Database	NA
1034	HIGDB	A single point web resource for Haemophilus influenzae	http://bioserver1.physics.iisc.ernet.in/HIGDB/	Computers in biology and medicine	Protein Structure Protein Function	Other	2014	25450223	Anand Anbarasu	aanand@vit.ac.in	VIT University	Vellore	Tamil Nadu	VIT	Functional	Database	bio.tools
1041	Indian wild Rice database	Detailed information on 614 such diverse wild rice accessions collected from different agro-climatic zones of India, including 46 different morphological descriptors,complete passport data and DNA fingerprints.	http://nksingh.nationalprof.in: 8080/iwrdb/index.jsp	Database: The Journal of Biological Databases and Curation	Protein Structure Protein Function	DNA	2018	29982559	Ashutosh Singh	ashutosh.bio@gmail.com	Shiv Nadar University Greater	Noida	Uttar Pradesh	Other	Functional	Database	NA
1042	TM-Aligner	Based on Wu-Manber and dynamic string matching algorithm which has significantly improved its accuracy and speed of multiple sequence alignment	http://lms.snu.edu.in/TM-Aligner/	Scientific Reports	Protein Function	DNA	2017	28970546	Ashutosh Singh	ashutosh.singh@snu.edu.in	Shiv Nadar University Greater	Noida	Uttar Pradesh	Other	Functional	Database	NA
1043	pStab	prediction of stable mutants, unfolding curves, stability maps and protein electrostatic frustration	http://pbl.biotech.iitm.ac.in/pStab	Bioinformatics	Protein Function	Protein	2018	29092002	Athi N Naganathan	athi@iitm.ac.in	Indian Institute of Technology (IIT M)	Chennai	Tamil Nadu	IIT	Functional	Prediction	NA
1044	pPerturb	A method for predicting long distance energy couplings and mutation-induced stability changes in proteins via perturbations	http://pbl.biotech.iitm.ac.in/pPerturb	ACS Omega	Protein Function	Protein	2020	31984271	Athi N Naganathan	athi@iitm.ac.in	Indian Institute of Technology (IIT M)	Chennai	Tamil Nadu	IIT	Functional	Prediction	NA
1046	Intercalate	A DNA intercalation methodology for an efficient prediction of ligand binding pose and energetics	http://www.scfbio-iitd.res.in/intercalate/	Bioinformatics	Protein Function Cheminformatics	DNA	2017	28073762	B Jayaram	bjayaram@chemistry.iitd.ac.in	Indian Institute of Technology (IIT D)	New Delhi	New Delhi	IIT	Functional	Prediction	NA
1050	pcSM	Capturing native/native like structures with a physico-chemical metric (pcSM) in protein folding	http://www.scfbio-iitd.res.in/software/pcsm.jsp	Bioichimica et biophysics acta	Protein Structure Protein Function	Protein	2013	23665455	B Jayaram	bjayaram@chemistry.iitd.ac.in	Indian Institute of Technology (IIT D)	New Delhi	New Delhi	IIT	Functional	Prediction	NA
1054	AADS	An automated active site identification, docking, and scoring protocol for protein targets based on physicochemical descriptors	http://www.scfbio-iitd.res.in/dock/ActiveSite_new.jsp	Journal of chemical information and modeling	Protein Structure Protein Function Cheminformatics	Protein	2011	21877713	B Jayaram	bjayaram@chemistry.iitd.ac.in	Indian Institute of Technology (IIT D)	New Delhi	New Delhi	IIT	Functional	Prediction	NA
1064	TiD	Standalone software for mining putative drug targets from bacterial proteome	http://bmicnip.in/TiD/	Genomics	Protein Structure Protein Function	Protein	2017	27856224	Chandra Shekhar Rai	csrai@ipu.ac.in	Guru Gobind Singh Indraprastha University	New Delhi	New Delhi	Other	Functional	Prediction	NA
1078	APMicroDB	Incorporated the primer information derived from Primer3 software of the 2504 bp flanking region of the identified marker	http://deepaklab.com/aphidmicrodb	Genomics data	Protein Function	Other	2017	28413782	Deepak Singla	deepkumar1983@gmail.com	ICAR - Indian Agricultural Statistics Research Institute (IASRI)	New Delhi	New Delhi	ICAR	Functional	Database	NA
1080	RNABP COGEST	A resource for investigating functional RNAs	http://bioinf.iiit.ac.in/RNABPCOGEST/	Database: The Journal of Biological Databases and Curation	Protein Function	RNA	2015	25776022	Dhananjay Bhattacharyya	dhananjay.bhattacharyya@saha.ac.in	Saha Institute of Nuclear Physics	Kolkata	West Bengal	Other	Functional	Database	NA
1084	PRmePRed	A protein arginine methylation prediction tool	http://bioinfo.icgeb.res.in/PRmePRed/	PLOS One	Protein Function	Protein	2017	28813517	Dinesh Gupta	dinesh@icgeb.res.in	DBT - International Centre for Genetic Engineering and Biotechnology (ICGEB)	New Delhi	New Delhi	DBT	Functional	Prediction	bio.tools
1114	ccPDB 2.0	An updated version of datasets created and compiled from Protein Data Bank	https://webs.iiitd.edu.in/raghava/ccpdb/	Database: The Journal of Biological Databases and Curation	Protein Structure Protein Function	Protein	2019	30689843	Gajendra PS Raghava	raghava@iiitd.ac.in	Indraprastha Institute of Information Technology (IIITD)	New Delhi	New Delhi	IIIT	Functional	Database	bio.tools
1116	PPDBench	Benchmarking of docking software on protein-peptide complexes.	https://webs.iiitd.edu.in/raghava/ppdbench/	BMC Bioinformatics	Protein Function	Protein	2019	30717654	Gajendra PS Raghava	raghava@iiitd.ac.in	Indraprastha Institute of Information Technology (IIITD)	New Delhi	New Delhi	IIIT	Functional	Prediction	NA
1131	SATPdb	Database of structurally annotated therapeutic peptides	http://webs.iiitd.edu.in/raghava/satpdb/	Nucleic Acids Research	Protein Function	Protein	2016	26527728	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Database	BTISNet
1133	STARPDB	BLAST-based structural annotation of protein residues using Protein Data Bank	http://webs.iiitd.edu.in/raghava/starpdb/	Biology Direct	Protein Function	Protein	2016	26810894	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Database	bio.tools
1138	LPIcom	A web server for analysis, comparison and prediction of protein ligand binding sites	http://webs.iiitd.edu.in/raghava/lpicom/	Biology Direct	Protein Function	Protein	2016	27016210	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	NA
1146	HSLpred	Prediction of subcellular localization of human proteins with high accuracy	http://webs.iiitd.edu.in/raghava/hslpred/	The Journal of Biological Chemistry	Protein Function	Protein	2015	15647269	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	bio.tools, BTISNet
1171	HIVcoPred	Hybrid approach for predicting coreceptor used by HIV-1 from its V3 loop amino acid sequence	http://webs.iiitd.edu.in/raghava/hivcopred/	PLOS One	Protein Function Vaccinomics	Protein	2013	23596523	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	BTISNet
1174	ToxinPred	In silico approach for predicting toxicity of peptides and proteins	http://webs.iiitd.edu.in/raghava/toxinpred/	PLOS One	Protein Function Vaccinomics BioDrug	Protein	2013	24058508	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	BTISNet
1181	MARSpred	Predicting sub-cellular localization of tRNA synthetases from their primary structures	http://webs.iiitd.edu.in/raghava/marspred/	Amino acids	Genomics Protein Function	RNA	2012	21400228	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	BTISNet
1184	RNApred	A webserver for the prediction of RNA binding proteins.	http://webs.iiitd.edu.in/raghava/rnapred/	Journal of molecular recognition	Protein Function	Protein	2011	20677174	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	BTISNet
1190	PFMpred	Prediction of mitochondrial proteins of malaria parasite using split amino acid composition and PSSM profile	http://webs.iiitd.edu.in/raghava/pfmpred/	Amino acids	Protein Function	Protein	2010	19908123	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	bio.tools, BTISNet
1199	FADpred	A webserver for the prediction of FAD interacting residues.	https://webs.iiitd.edu.in/raghava/fadpred/	BMC Bioinformatics	Protein Function Interactome	Other	2010	20122222	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	NA
1200	NpPred	Prediction of nuclear proteins using SVM and HMM models	http://webs.iiitd.edu.in/raghava/nppred/	BMC Bioinformatics	Protein Function	Protein	2009	19152693	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	bio.tools
1202	RSLpred	A method for the subcellular localization prediction of rice proteins	http://webs.iiitd.edu.in/raghava/rslpred/	Proteomics	Protein Function	Protein	2009	19402042	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	BTISNet
1203	ChemoPred	A server to predict chemokines and their receptor	http://webs.iiitd.edu.in/raghava/chemopred/	Protein engineering,design and selection	Protein Function	Protein	2009	19491216	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	NA
1209	PSEApred	Prediction of Plasmodium Secretory and Infected Erythrocyte Associated Proteins	http://webs.iiitd.edu.in/raghava/pseapred/	BMC Bioinformatics	Protein Function	Protein	2008	18416838	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	BTISNet
1211	DPROT	Prediction of disordered proteins using evolutionary information	http://webs.iiitd.edu.in/raghava/dprot/	Amino acids	Protein Function	Protein	2008	18425404	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	NA
1212	CyclinPred	CyclinPred is a SVM based prediction method to identify novel cyclins	http://bioinfo.icgeb.res.in/cyclinpred/	PLOS One	Protein Function	Protein	2008	18596929	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	BTISNet
1213	COPid	Composition based protein identification	http://www.imtech.res.in/raghava/copid/	In Silico biology	Protein Function	Protein	2008	18928200	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Database	BTISNet
1214	SRTpred	A machine learning based method for the prediction of secretory proteins using amino acid composition, their order and similarity-search	http://webs.iiitd.edu.in/raghava/srtpred/	In Silico biology	Protein Function	Protein	2008	18928201	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	NA
1215	ESLPred2	Improved method for predicting subcellular localization of eukaryotic proteins	http://webs.iiitd.edu.in/raghava/eslpred/	BMC Bioinformatics	Protein Function	Protein	2008	19038062	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	bio.tools, BTISNet
1217	GSTPred	Support vector machine based prediction of glutathione S-transferase proteins	http://webs.iiitd.edu.in/raghava/gstpred/	Protein and peptide letters	Protein Function	Protein	2007	17627599	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	bio.tools, BTISNet
1219	TBpred	A webserver that predicts four subcellular localization of mycobacterial proteins	http://webs.iiitd.edu.in/raghava/tbpred/	BMC Bioinformatics	Protein Function	Protein	2007	17854501	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	BTISNet
1221	DNAbinder	A webserver for predicting DNA-binding proteins	http://webs.iiitd.edu.in/raghava/dnabinder/	BMC Bioinformatics	Protein Function	Protein	2007	18042272	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	NA
1222	Oxypred	Prediction and classification of oxygen-binding proteins	http://webs.iiitd.edu.in/raghava/oxypred/	Genomics, Proteomics & Bioinformatics	Protein Function	Protein	2007	18267306	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	bio.tools, BTISNet
1223	NTXpred	Prediction of neurotoxins based on their function and source	http://webs.iiitd.edu.in/raghava/ntxpred/	In Silico biology	Protein Function	Other	2007	18391230	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	BTISNet
1228	VICMpred	An SVM-based method for the prediction of functional proteins of Gram-negative bacteria using amino acid patterns and composition	http://webs.iiitd.edu.in/raghava/vicmpred/	Genomics, Proteomics & Bioinformatics	Protein Function	Protein	2006	16689701	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	BTISNet
1231	RB-Pred	A case study on rice blast prediction	http://webs.iiitd.edu.in/raghava/rbpred/	BMC Bioinformatics	Protein Function	Other	2006	17083731	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	bio.tools
1232	VGIchan	Voltage gated ion channel prediction server	http://webs.iiitd.edu.in/raghava/vgichan/	Genomics, Proteomics & Bioinformatics	Protein Function	Protein	2006	17531801	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	BTISNet
1233	PSLpred	Prediction of subcellular localization of bacterial proteins	http://webs.iiitd.edu.in/raghava/pslpred/	Bioinformatics	Protein Function	Protein	2005	15699023	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	BTISNet
1236	GPCRsclass	This webserver predicts amine type of G-protein coupled receptors	http://webs.iiitd.edu.in/raghava/gpcrsclass/	Nucleic Acids Research	Protein Function	Protein	2005	15980444	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	bio.tools