Browse result page of IndioBioDb
The total number entries retrieved from this search are 73
ID | Resource Name | Resource Description | Resource Link | Journal | Class | Source | Year of Publication | PMID | Corresponding Author | Institute | City | State | Functional Status | Funding Agency | Resource category | Other Repository | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1005 | DIRProt | A computational approach for discriminating insecticide resistant proteins from non-resistant proteins | http://cabgrid.res.in:8080/dirprot/ | BMC Bioinformatics | Protein Function | Protein | 2017 | 28340571 | A R Rao | rao.cshl.work@gmail.com | ICAR - Indian Agricultural Statistics Research Institute (IASRI) | New Delhi | New Delhi | ICAR | Functional | Prediction | NA |
1010 | dSSpred | A statistical approach for 5' splice site prediction using short sequence motifs and without encoding sequence data | http://cabgrid.res.in:8080/sspred | BMC Bioinformatics | Genomics | DNA | 2014 | 25420551 | A R Rao | rao.cshl.work@gmail.com | ICAR - Indian Agricultural Statistics Research Institute (IASRI) | New Delhi | New Delhi | ICAR | Functional | Prediction | NA |
1013 | funbarRF | DNA barcode-based fungal species prediction using multiclass Random Forest supervised learning model | http://cabgrid.res.in:8080/funbarrf/ | BMC Genomics | Genomics | DNA | 2019 | 30616524 | A R Rao | rao.cshl.work@gmail.com | ICAR - Indian Agricultural Statistics Research Institute (IASRI) | New Delhi | New Delhi | ICAR | Functional | Prediction | NA |
1032 | RiceMetaSys | Provides comprehensive information on salt responsive genes (SRGs) and drought responsive genes (DRGs) across genotypes, crop development stages and tissues, identified from multiple microarray datasets | http://14.139.229.201 | BMC Bioinformatics | Genomics Protein Function | DNA | 2017 | 28964253 | Amitha Mithra S V | amithamithra.nrcpb@gmail.com | ICAR - National Research Centre on Plant Biotechnology (NRCPB) | New Delhi | New Delhi | ICAR | Functional | Database | NA |
1036 | GCAC | Galaxy for compound activity classification | http://ccbb.jnu.ac.in/gcac | BMC Bioinformatics | Cheminformatics | Other | 2019 | 30717669 | Andrew Lynn | andrew@jnu.ac.in | Jawaharlal Nehru University (JNU) | New Delhi | New Delhi | JNU | Functional | Prediction | bio.tools |
1052 | Sanjeevini | A freely accessible webserver for target directed lead molecule discovery | http://www.scfbio-iitd.res.in/sanjeevini/sanjeevini.jsp | BMC Bioinformatics | Cheminformatics | Other | 2012 | 23282245 | B Jayaram | bjayaram@chemistry.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Prediction | NA |
1058 | PeptideMine | A webserver for the design of peptides for protein:peptide binding studies derived from protein:protein interactomes | http://caps.ncbs.res.in/peptidemine/ | BMC Bioinformatics | BioDrug | Protein | 2010 | 20858292 | Balasubramanian Gopal Ramanathan Sowdhamini | bgopal@mbu.iisc.ernet.in mini@ncbs.res.in | National Center for Biological Sciences (NCBS) | Bangalore | Karnataka | NCBS | Functional | Prediction | NA |
1091 | VirulentPred | A SVM based prediction method for virulent proteins in bacterial pathogens | http://bioinfo.icgeb.res.in/virulent/ | BMC Bioinformatics | Vaccinomics | Protein | 2008 | 18226234 | Dinesh Gupta | dinesh@icgeb.res.in | DBT - International Centre for Genetic Engineering and Biotechnology (ICGEB) | New Delhi | New Delhi | DBT | Functional | Prediction | NA |
1094 | LipocalinPred | A SVM-based Method for Prediction of Lipocalins | http://bioinfo.icgeb.res.in/lipocalinpred/ | BMC Bioinformatics | BioDrug | Protein | 2009 | 20030857 | Dinesh Gupta | dinesh@icgeb.res.in | DBT - International Centre for Genetic Engineering and Biotechnology (ICGEB) | New Delhi | New Delhi | DBT | Functional | Prediction | Bioinformatics Software and Tools |
1106 | Zif-Predict IHBE | Exploiting the recognition code for elucidating the mechanism of zinc finger protein-DNA interactions | http://web.iitd.ac.in/~sundar/zifpredict_ihbe | BMC Bioinformatics | Interactome | DNA | 2016 | 28155654 | Durai Sundar | sundar@dbeb.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Prediction | NA |
1107 | ZifNN | An ensemble micro neural network approach for elucidating interactions between zinc finger proteins and their target DNA | http://web.iitd.ac.in/~sundar/ZifNN/ | BMC Bioinformatics | Interactome | DNA | 2016 | 28155662 | Durai Sundar | sundar@dbeb.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Prediction | NA |
1109 | ZifBASE | A database of zinc finger proteins and associated resources | http://web.iitd.ac.in/~sundar/zifbase | BMC Genomics | Protein Structure | Protein | 2009 | 19737425 | Durai Sundar | sundar@dbeb.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Database | NA |
1113 | HumCFS | A database of fragile sites in human chromosomes | http://webs.iiitd.edu.in/raghava/humcfs/ | BMC Genomics | Genomics | DNA | 2019 | 30999860 | Gajendra PS Raghava | raghava@iiitd.ac.in | Indraprastha Institute of Information Technology (IIITD) | New Delhi | New Delhi | IIIT | Functional | Database | bio.tools |
1116 | PPDBench | Benchmarking of docking software on protein-peptide complexes. | https://webs.iiitd.edu.in/raghava/ppdbench/ | BMC Bioinformatics | Protein Function | Protein | 2019 | 30717654 | Gajendra PS Raghava | raghava@iiitd.ac.in | Indraprastha Institute of Information Technology (IIITD) | New Delhi | New Delhi | IIIT | Functional | Prediction | NA |
1134 | CancerIN | Prediction of anticancer molecules using hybrid model developed on molecules screened against NCI-60 cancer cell lines | http://crdd.osdd.net/oscadd/cancerin/ | BMC Cancer | Cheminformatics | Other | 2016 | 26860193 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1142 | ProCarDB | A database of bacterial carotenoids | http://bioinfo.imtech.res.in/servers/procardb/ | BMC Microbiology | Cheminformatics | Other | 2016 | 27230105 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1158 | RNAcon | Prediction and classification of ncRNAs using structural information | http://webs.iiitd.edu.in/raghava/rnacon/ | BMC Genomics | Vaccinomics | RNA | 2014 | 24521294 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | NA |
1164 | HLP | Designing of peptides with desired half-life in intestine-like environment | http://webs.iiitd.edu.in/raghava/hlp/ | BMC Bioinformatics | BioDrug | Protein | 2014 | 25141912 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1165 | tRNAmod | Prediction of uridine modifications in tRNA sequences | http://webs.iiitd.edu.in/raghava/trnamod/ | BMC Bioinformatics | Vaccinomics Interactome | RNA | 2014 | 25272949 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1166 | VitaPred | Prediction of vitamin interacting residues in a vitamin binding protein using evolutionary information | http://webs.iiitd.edu.in/raghava/vitapred/ | BMC Bioinformatics | Interactome | Protein | 2013 | 23387468 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1185 | GDoQ | Prediction of GLMU inhibitors (anti-tubeculosis inhibitors) using QSAR and docking apprach | http://webs.iiitd.edu.in/raghava/gdoq/ | BMC pharmacol | Cheminformatics | Protein | 2011 | 21733180 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1186 | CancerPred | Analysis and prediction of cancerlectins using evolutionary and domain information | http://webs.iiitd.edu.in/raghava/cancer_pred/ | BMC Research Notes | Vaccinomics | Other | 2011 | 21774797 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools, BTISNet |
1191 | BIAdb | A curated database of benzylisoquinoline alkaloids | http://webs.iiitd.edu.in/raghava/biadb/ | BMC Pharmacology | Cheminformatics | Other | 2010 | 20205728 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1192 | KiDoQ | Docking energy scores based method for developing ligand based model and predicting antibacterials | http://webs.iiitd.edu.in/raghava/kidoq/ | BMC Bioinformatics | Cheminformatics | Protein | 2010 | 20222969 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1193 | NADbinder | Identification of NAD interacting residues in proteins | http://webs.iiitd.edu.in/raghava/nadbinder/ | BMC Bioinformatics | Interactome | Protein | 2010 | 20353553 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools, BTISNet |
1194 | GTPbinder | Prediction of GTP interacting residues, dipeptides and tripeptides in a protein from its evolutionary information | http://webs.iiitd.edu.in/raghava/gtpbinder/ | BMC Bioinformatics | Interactome | Protein | 2010 | 20525281 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1195 | MetaPred | Prediction of cytochrome P450 isoform responsible for metabolizing a drug molecule | http://webs.iiitd.edu.in/raghava/metapred/ | BMC Pharmacology | Cheminformatics | Other | 2010 | 20637097 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1196 | icaars | rediction and classification of aminoacyl tRNA synthetases using PROSITE domains | http://webs.iiitd.edu.in/raghava/icaars/ | BMC research | Genomics | RNA | 2010 | 20860794 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1199 | FADpred | A webserver for the prediction of FAD interacting residues. | https://webs.iiitd.edu.in/raghava/fadpred/ | BMC Bioinformatics | Protein Function Interactome | Other | 2010 | 20122222 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | NA |
1200 | NpPred | Prediction of nuclear proteins using SVM and HMM models | http://webs.iiitd.edu.in/raghava/nppred/ | BMC Bioinformatics | Protein Function | Protein | 2009 | 19152693 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools |
1201 | MHCBN4 | A database of MHC/TAP binding peptides and T-cell epitopes | http://webs.iiitd.edu.in/raghava/mhcbn/ | BMC Research Notes | Vaccinomics | Protein | 2009 | 19379493 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1204 | Hmrbase | A database of hormones and their receptors | http://webs.iiitd.edu.in/raghava/hmrbase/ | BMC Genomics | Vaccinomics | Other | 2009 | 19589147 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1206 | ATPint | Identification of ATP binding sites in ATP-binding proteins | http://webs.iiitd.edu.in/raghava/atpint/ | BMC Bioinformatics | Interactome | Protein | 2009 | 20021687 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1209 | PSEApred | Prediction of Plasmodium Secretory and Infected Erythrocyte Associated Proteins | http://webs.iiitd.edu.in/raghava/pseapred/ | BMC Bioinformatics | Protein Function | Protein | 2008 | 18416838 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1210 | PRRDB | A comprehensive database of pattern-recognition receptors and their ligands | http://webs.iiitd.edu.in/raghava/prrdb/index.html | BMC Genomics | Vaccinomics | Protein | 2008 | 18423032 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | BTISNet |
1215 | ESLPred2 | Improved method for predicting subcellular localization of eukaryotic proteins | http://webs.iiitd.edu.in/raghava/eslpred/ | BMC Bioinformatics | Protein Function | Protein | 2008 | 19038062 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools, BTISNet |
1218 | AntiBP | Analysis and prediction of antibacterial peptides | http://webs.iiitd.edu.in/raghava/antibp/ | BMC Bioinformatics | BioDrug | Protein | 2007 | 17645800 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1219 | TBpred | A webserver that predicts four subcellular localization of mycobacterial proteins | http://webs.iiitd.edu.in/raghava/tbpred/ | BMC Bioinformatics | Protein Function | Protein | 2007 | 17854501 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1221 | DNAbinder | A webserver for predicting DNA-binding proteins | http://webs.iiitd.edu.in/raghava/dnabinder/ | BMC Bioinformatics | Protein Function | Protein | 2007 | 18042272 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | NA |
1226 | AntiBP2 | Mapping of antibacterial peptides in a protein sequence | http://webs.iiitd.edu.in/raghava/antibp2/ | BMC Bioinformatics | Vaccinomics | Protein | 2007 | 20122190 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1231 | RB-Pred | A case study on rice blast prediction | http://webs.iiitd.edu.in/raghava/rbpred/ | BMC Bioinformatics | Protein Function | Other | 2006 | 17083731 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools |
1234 | LGEpred | Correlation analysis and prediction of genes expression from amino acid sequence of proteins | http://webs.iiitd.edu.in/raghava/lgepred/ | BMC Bioinformatics | Genomics | Protein | 2005 | 15773999 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools, BTISNet |
1235 | BciPep | A database of B-cell epitopes | http://www.imtech.res.in/raghava/bcipep | BMC Genomics | Vaccinomics | Other | 2005 | 15921533 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | Bioinformatics Software and Tools, BTISNet |
1241 | ECGPred | Analsis of expresion data and correlation between gene expression and nucleotides composition of genes. | https://webs.iiitd.edu.in/raghava/ecgpred/ | BMC Bioinformatics | Genomics | Other | 2005 | doi:10.2174/1875036200802010064 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1277 | Terezyme | A predictive algorithm for identification, classification and assignment of broad substrate unit to terpene synthase (TPS) and prenyl transferase (PT) enzymes, known to generate the enormous structural and functional diversity of terpenoid compounds across the plant kingdom | http://nipgr.res.in/terzyme.html | BMC Bioinformatics | Protein Function Cheminformatics | Protein | 2018 | 29339971 | Gitanjali Yadav | gy@nipgr.ac.in | DBT - National Institute of Plant Genome Research (NIPGR) | New Delhi | New Delhi | DBT | Functional | Database | NA |
1289 | WildSilkbase | An EST database of wild silkmoths | http://www.cdfd.org.in/wildsilkbase/ | BMC Genomics | Genomics | Other | 2008 | 18637161 | J Nagaraju | jnagaraju@cdfd.org.in | CSIR - Centre for DNA Fingerprinting and Diagnostics (CSIR-CDFD) | Hyderabad | Telangana | CSIR | Functional | Database | NA |
1290 | NeuroDNet | An open source platform for constructing and analyzing neurodegenerative disease networks | http://bioschool.iitd.ac.in/NeuroDNet/ | BMC neuroscience | Interactome | Other | 2013 | 23286825 | James Gomes | jgomes@bioschool.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Database | NA |
1295 | RCDB | Renal Cancer Gene Database | http://www.juit.ac.in/attachments/jsr/rcdb/homenew.html | BMC Research Notes | Genomics Vaccinomics | DNA | 2012 | 22608002 | Jayashree Ramana | jayashree.ramana@juit.ac.in | Jaypee University of Information Technology (JUIT) | Solan | Himachal Pradesh | JUIT | Functional | Database | NA |
1315 | PDZscape | Encompasses the complete available information on 58,648 PDZ-containing proteins with their known and putative binding partners on one platform | http://www.actrec.gov.in:8080/pdzscape/ | BMC Bioinformatics | Protein Structure | Protein | 2018 | 29699484 | Kakoli Bose | kbose@actrec.gov.in | Advanced Centre for Treatment Research and Education in Cancer (ACTREC) Tata Memorial Centre | Mumbai | Maharashtra | ACTREC | Functional | Database | NA |
1321 | TIPMaP | A web server to establish transcript isoform profiles from reliable microarray probes | http://resource.ibab.ac.in/TIPMaP | BMC Genomics | Genomics | Other | 2013 | 24373374 | Kshitish K Acharya | kshitish@ibab.ac.in | Institute of Bioinformatics and Applied Biotechnology (IBAB) | Bangalore | Karnataka | IBAB | Functional | Prediction | NA |