PSSM-based Module

This page allows users to predict DNA-binding residues in a protein from its evolutionary information. This is module uses the PSSM Profile for predicting DNA-binding residues. In this module, server first generate PSSM profile using PSIBLAST then predict DNA binding residues in a protein from its PSSM profile. This is a time consuming module, we do not allow to submit too many sequence. This server may send results or URL to result page if user submit their email address (This module is slow, please provide email address). For more information see help page

PSSM Submission Form


Job/Sequence Name: [optional]   

Paste protein sequences (Fasta format):

Or upload protein sequence file in fasta format:

Feature for developing modelPSSM

Select the Threshold value:

Enter email address[optional]:
(Enter email if you want to receive your result via email)