CRIP: Computational Resources for predicting protein-macromolecular interactions
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G.P.S. Raghava
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Department of Computational Biology
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Biomolecular Interactions
Brief Introduction
Diseases prediction
Personal Drugs
Vaccines
Biomarkers
Protein-Protein
Databases
Prediction Servers
Slides/Links
Datasets/References
Protein-DNA
Databases
Prediction Servers
Slides/Links
Datasets/References
Protein-RNA
Databases
Prediction Servers
Slides/Links
Datasets/References
Protein-Metabolite
Databases
Prediction Servers
Slides/Links
Datasets/References
Protein-Lipid
Databases
Prediction Servers
Slides/Links
Datasets/References
Protein-Carbohydrate
Databases
Prediction Servers
Slides/Links
Datasets/References
Following are the databases of protein-protein interactions-
S.No
Database
Link
Comment
1.
HPRD
http://www.hprd.org/
Human protein reference database
2.
MINT
http://mint.bio.uniroma2.it/mint/Welcome.do
MINT: a Molecular INTeraction database
3.
BOND
http://bond.unleashedinformatics.com/Action?
Biomolecular Object Network Databank
4.
DIP
http://dip.doe-mbi.ucla.edu/
Database of Interacting Proteins
5.
IntAct
http://www.ebi.ac.uk/intact/site/index.jsf
protein interaction data
6.
REACTOME
http://reactome.org/
REACTOME is a free, online, open-source, curated pathway database
7.
MIPS
http://www.helmholtz-muenchen.de/en/mips/
Munich Information Center for Protein Sequences