Browsing of Conserved Peptides
First, we have identified conserved peptides across different species and made those available for browsing. These conserved peptides have been shown in following table (position of a conserved 9mer sequence in all the five species of Ebola virus). Here, information is provided about the source id of 9mer (gene ID, Swiss-Prot ID), name of source protein and the position of that peptide in the protein. This information is provided for all the five species of the Ebola virus.
| Sequence | Gene ID | Uniprot ID | Protein Name | Peptide Index | Gene ID | Uniprot ID | Protein Name | Peptide Index | Gene ID | Uniprot ID | Protein Name | Peptide Index | Gene ID | Uniprot ID | Protein Name | Peptide Index | Gene ID | Uniprot ID | Protein Name | Peptide Index |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9 mer | Bundibugyo Species (BDBV) | Reston Species (RESTV) | Sudan Species (SUDV) | Taiforest Species (TAFV) | Mayinga Zaire 1976 Species (EBOV) | |||||||||||||||
| AADIFSRTP | gi_302371221 | YP_003815440.1 | polymerase | 1030 | gi_22789229 | NP_690587.1 | RNA-dependentRNApolymerase | 1030 | gi_55770815 | YP_138527.1 | polymerase | 1031 | gi_302315377 | YP_003815431.1 | polymerase | 1030 | gi_10313999 | NP_066251.1 | RNA-dependentRNApolymerase | 1030 |
| AAIMLASYT | gi_302371216 | YP_003815434.1 | VP40 | 112 | gi_22789225 | NP_690582.1 | matrixproteinVP40 | 112 | gi_55770810 | YP_138522.1 | matrixprotein | 112 | gi_302315372 | YP_003815425.1 | VP40 | 112 | gi_10313993 | NP_066245.1 | matrixprotein | 112 |
| AALWQQWDR | gi_302371219 | YP_003815438.1 | VP30 | 223 | gi_22789227 | NP_690585.1 | transcriptionactivationfactorVP30 | 223 | gi_55770813 | YP_138525.1 | minornucleoprotein | 223 | gi_302315375 | YP_003815429.1 | VP30 | 223 | gi_10313997 | NP_066249.1 | minornucleoprotein | 223 |
| AARVAASLA | gi_302371221 | YP_003815440.1 | polymerase | 768 | gi_22789229 | NP_690587.1 | RNA-dependentRNApolymerase | 768 | gi_55770815 | YP_138527.1 | polymerase | 769 | gi_302315377 | YP_003815431.1 | polymerase | 768 | gi_10313999 | NP_066251.1 | RNA-dependentRNApolymerase | 768 |
| AASLAKVTS | gi_302371221 | YP_003815440.1 | polymerase | 772 | gi_22789229 | NP_690587.1 | RNA-dependentRNApolymerase | 772 | gi_55770815 | YP_138527.1 | polymerase | 773 | gi_302315377 | YP_003815431.1 | polymerase | 772 | gi_10313999 | NP_066251.1 | RNA-dependentRNApolymerase | 772 |
| AATEAEKQL | gi_302371214 | YP_003815432.1 | nucleoprotein | 345 | gi_22789223 | NP_690580.1 | nucleoprotein | 345 | gi_55770808 | YP_138520.1 | majornucleoprotein | 345 | gi_302315370 | YP_003815423.1 | NP | 345 | gi_10314000 | NP_066243.1 | nucleoprotein | 345 |
| ACGIFLKPD | gi_302371221 | YP_003815440.1 | polymerase | 781 | gi_22789229 | NP_690587.1 | RNA-dependentRNApolymerase | 781 | gi_55770815 | YP_138527.1 | polymerase | 782 | gi_302315377 | YP_003815431.1 | polymerase | 781 | gi_10313999 | NP_066251.1 | RNA-dependentRNApolymerase | 781 |
| ACLEKVQRQ | gi_302371214 | YP_003815432.1 | nucleoprotein | 166 | gi_22789223 | NP_690580.1 | nucleoprotein | 166 | gi_55770808 | YP_138520.1 | majornucleoprotein | 166 | gi_302315370 | YP_003815423.1 | NP | 166 | gi_10314000 | NP_066243.1 | nucleoprotein | 166 |
| ADGLAKAFP | gi_302371221 | YP_003815440.1 | polymerase | 581 | gi_22789229 | NP_690587.1 | RNA-dependentRNApolymerase | 581 | gi_55770815 | YP_138527.1 | polymerase | 582 | gi_302315377 | YP_003815431.1 | polymerase | 581 | gi_10313999 | NP_066251.1 | RNA-dependentRNApolymerase | 581 |
| ADIFSRTPS | gi_302371221 | YP_003815440.1 | polymerase | 1031 | gi_22789229 | NP_690587.1 | RNA-dependentRNApolymerase | 1031 | gi_55770815 | YP_138527.1 | polymerase | 1032 | gi_302315377 | YP_003815431.1 | polymerase | 1031 | gi_10313999 | NP_066251.1 | RNA-dependentRNApolymerase | 1031 |
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