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| PolysacDB ID | 2564 |
| Carbohydrate Name | O-polysaccharide (Drugpedia) |
| Carbohydrate Class | Lipopolysaccharide |
| Microbe | Xanthomonas hyacinthi S148 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | The Xanthomonas LPS showed a predominance of mannose (Man), glucose (Glc), galacturonic acid (GalA), and N-acetylglucosamine (GlcNAc) residues |
| BCSDB Structure | N/A |
| Proposed functions | N/A |
| Antigenic Nature used to produce antibodies | Crude cell wall preparation and purified fimbriae |
| Carrier Name | Nil |
| Conjugation Method | Nil |
| Antibodies | Mab 2E5 |
| Antibody type and class | IgM |
| Assay System | Immunoblotting, immunofluorescence, enzyme-linked immunosorbent assay (ELISA), and immunoelectron microscopy |
| Cross-reactivity | This Mab cross-reacted with all X. hyacinthi strains. No cross-reaction was found with 27 other Xanthomonas pathovars tested or with 14 other bacterial species from other genera, such as Erwinia and Pseudomonas |
| Proposed epitopes | The O antigen was found to consist of rhamnose and fucose in a 2:1 molar ratio. Mab 2E5 recognized only S-LPS and did not recognize R-LPS |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab could be useful for structural studies, for detection purposes in commercial and agricultural settings, and for serological typing purposes |
| Curator ID | AA + AS |
| Date of Curation | 30-06-2011 |
| References | 10473431 |
| PolysacDB ID | 2565 |
| Carbohydrate Name | Lipopolysaccharide (Drugpedia) |
| Carbohydrate Class | Lipopolysaccharide |
| Microbe | Xanthomonas hyacinthi S148 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | The Xanthomonas LPS showed a predominance of mannose (Man), glucose (Glc), galacturonic acid (GalA), and N-acetylglucosamine (GlcNAc) residues |
| BCSDB Structure | N/A |
| Proposed functions | N/A |
| Antigenic Nature used to produce antibodies | Crude cell wall preparation and purified fimbriae |
| Carrier Name | Nil |
| Conjugation Method | Nil |
| Antibodies | Mab 1B10 |
| Antibody type and class | IgG1 |
| Assay System | Immunoblotting, immunofluorescence, enzyme-linked immunosorbent assay (ELISA), and immunoelectron microscopy |
| Cross-reactivity | This Mab cross-reacted with all X. hyacinthi strains. No cross-reaction was found with 27 other Xanthomonas pathovars tested or with 14 other bacterial species from other genera, such as Erwinia and Pseudomonas |
| Proposed epitopes | The O antigen was found to consist of rhamnose and fucose in a 2:1 molar ratio. This Mab recognized both R-LPS and S-LPS |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab could be useful for structural studies, for detection purposes in commercial and agricultural settings, and for serological typing purposes |
| Curator ID | AA + AS |
| Date of Curation | 01-07-2011 |
| References | 10473431 |
| PolysacDB ID | 2566 |
| Carbohydrate Name | Lipopolysaccharide (Drugpedia) |
| Carbohydrate Class | Lipopolysaccharide |
| Microbe | Xanthomonas hyacinthi S148 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | The Xanthomonas LPS showed a predominance of mannose (Man), glucose (Glc), galacturonic acid (GalA), and N-acetylglucosamine (GlcNAc) residues |
| BCSDB Structure | N/A |
| Proposed functions | N/A |
| Antigenic Nature used to produce antibodies | Crude cell wall preparation and purified fimbriae |
| Carrier Name | Nil |
| Conjugation Method | Nil |
| Antibodies | Mab 3E10 |
| Antibody type and class | IgG3 |
| Assay System | Immunoblotting, immunofluorescence, enzyme-linked immunosorbent assay (ELISA), and immunoelectron microscopy |
| Cross-reactivity | This Mab cross-reacted with all X. hyacinthi strains. No cross-reaction was found with 27 other Xanthomonas pathovars tested or with 14 other bacterial species from other genera, such as Erwinia and Pseudomonas |
| Proposed epitopes | The O antigen was found to consist of rhamnose and fucose in a 2:1 molar ratio. This Mab recognized both R-LPS and S-LPS |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab could be useful for structural studies, for detection purposes in commercial and agricultural settings, and for serological typing purposes |
| Curator ID | AA + AS |
| Date of Curation | 01-07-2011 |
| References | 10473431 |
| PolysacDB ID | 2567 |
| Carbohydrate Name | Lipopolysaccharide (Drugpedia) |
| Carbohydrate Class | Lipopolysaccharide |
| Microbe | Xanthomonas hyacinthi S148 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | The Xanthomonas LPS showed a predominance of mannose (Man), glucose (Glc), galacturonic acid (GalA), and N-acetylglucosamine (GlcNAc) residues |
| BCSDB Structure | N/A |
| Proposed functions | N/A |
| Antigenic Nature used to produce antibodies | Crude cell wall preparation and purified fimbriae |
| Carrier Name | Nil |
| Conjugation Method | Nil |
| Antibodies | Mab 6A1 |
| Antibody type and class | IgG1 |
| Assay System | Immunoblotting, immunofluorescence, enzyme-linked immunosorbent assay (ELISA), and immunoelectron microscopy |
| Cross-reactivity | This Mab cross-reacted with all X. hyacinthi strains. No cross-reaction was found with 27 other Xanthomonas pathovars tested or with 14 other bacterial species from other genera, such as Erwinia and Pseudomonas |
| Proposed epitopes | The O antigen was found to consist of rhamnose and fucose in a 2:1 molar ratio. This Mab recognized both R-LPS and S-LPS |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab could be useful for structural studies, for detection purposes in commercial and agricultural settings, and for serological typing purposes |
| Curator ID | AA + AS |
| Date of Curation | 02-07-2011 |
| References | 10473431 |
| PolysacDB ID | 2568 |
| Carbohydrate Name | Lipopolysaccharide (Drugpedia) |
| Carbohydrate Class | Lipopolysaccharide |
| Microbe | Xanthomonas hyacinthi S148 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | The Xanthomonas LPS showed a predominance of mannose (Man), glucose (Glc), galacturonic acid (GalA), and N-acetylglucosamine (GlcNAc) residues |
| BCSDB Structure | N/A |
| Proposed functions | N/A |
| Antigenic Nature used to produce antibodies | Crude cell wall preparation and purified fimbriae |
| Carrier Name | Nil |
| Conjugation Method | Nil |
| Antibodies | Mab 6A12 |
| Antibody type and class | IgG2b |
| Assay System | Immunoblotting, immunofluorescence, enzyme-linked immunosorbent assay (ELISA), and immunoelectron microscopy |
| Cross-reactivity | This Mab cross-reacted with all X. hyacinthi strains. No cross-reaction was found with 27 other Xanthomonas pathovars tested or with 14 other bacterial species from other genera, such as Erwinia and Pseudomonas |
| Proposed epitopes | The O antigen was found to consist of rhamnose and fucose in a 2:1 molar ratio. This Mab recognized both R-LPS and S-LPS |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab could be useful for structural studies, for detection purposes in commercial and agricultural settings, and for serological typing purposes |
| Curator ID | AA + AS |
| Date of Curation | 02-07-2011 |
| References | 10473431 |
| PolysacDB ID | 2569 |
| Carbohydrate Name | Lipopolysaccharide (Drugpedia) |
| Carbohydrate Class | Lipopolysaccharide |
| Microbe | Xanthomonas hyacinthi S148 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | The Xanthomonas LPS showed a predominance of mannose (Man), glucose (Glc), galacturonic acid (GalA), and N-acetylglucosamine (GlcNAc) residues |
| BCSDB Structure | N/A |
| Proposed functions | N/A |
| Antigenic Nature used to produce antibodies | Crude cell wall preparation and purified fimbriae |
| Carrier Name | Nil |
| Conjugation Method | Nil |
| Antibodies | Mab 9H3 |
| Antibody type and class | IgG1 |
| Assay System | Immunoblotting, immunofluorescence, enzyme-linked immunosorbent assay (ELISA), and immunoelectron microscopy |
| Cross-reactivity | This Mab cross-reacted with all X. hyacinthi strains. No cross-reaction was found with 27 other Xanthomonas pathovars tested or with 14 other bacterial species from other genera, such as Erwinia and Pseudomonas |
| Proposed epitopes | The O antigen was found to consist of rhamnose and fucose in a 2:1 molar ratio. This Mab recognized both R-LPS and S-LPS |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab could be useful for structural studies, for detection purposes in commercial and agricultural settings, and for serological typing purposes |
| Curator ID | AA + AS |
| Date of Curation | 02-07-2011 |
| References | 10473431 |
| PolysacDB ID | 2570 |
| Carbohydrate Name | Lipopolysaccharide (Drugpedia) |
| Carbohydrate Class | Lipopolysaccharide |
| Microbe | Xanthomonas hyacinthi S148 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | The Xanthomonas LPS showed a predominance of mannose (Man), glucose (Glc), galacturonic acid (GalA), and N-acetylglucosamine (GlcNAc) residues |
| BCSDB Structure | N/A |
| Proposed functions | N/A |
| Antigenic Nature used to produce antibodies | Crude cell wall preparation and purified fimbriae |
| Carrier Name | Nil |
| Conjugation Method | Nil |
| Antibodies | Mab 12G7 |
| Antibody type and class | IgG3 |
| Assay System | Immunoblotting, immunofluorescence, enzyme-linked immunosorbent assay (ELISA), and immunoelectron microscopy |
| Cross-reactivity | This Mab cross-reacted with all X. hyacinthi strains. No cross-reaction was found with 27 other Xanthomonas pathovars tested or with 14 other bacterial species from other genera, such as Erwinia and Pseudomonas |
| Proposed epitopes | The O antigen was found to consist of rhamnose and fucose in a 2:1 molar ratio. This Mab recognized both R-LPS and S-LPS |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab could be useful for structural studies, for detection purposes in commercial and agricultural settings, and for serological typing purposes |
| Curator ID | AA + AS |
| Date of Curation | 02-07-2011 |
| References | 10473431 |
| PolysacDB ID | 2571 |
| Carbohydrate Name | Lipopolysaccharide (Drugpedia) |
| Carbohydrate Class | Lipopolysaccharide |
| Microbe | Xanthomonas hyacinthi S148 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | The Xanthomonas LPS showed a predominance of mannose (Man), glucose (Glc), galacturonic acid (GalA), and N-acetylglucosamine (GlcNAc) residues |
| BCSDB Structure | N/A |
| Proposed functions | N/A |
| Antigenic Nature used to produce antibodies | Crude cell wall preparation and purified fimbriae |
| Carrier Name | Nil |
| Conjugation Method | Nil |
| Antibodies | Mab 2D10 |
| Antibody type and class | IgG1 |
| Assay System | Immunoblotting, immunofluorescence, enzyme-linked immunosorbent assay (ELISA), and immunoelectron microscopy |
| Cross-reactivity | This Mab cross-reacted with all X. hyacinthi strains. No cross-reaction was found with 27 other Xanthomonas pathovars tested or with 14 other bacterial species from other genera, such as Erwinia and Pseudomonas |
| Proposed epitopes | The O antigen was found to consist of rhamnose and fucose in a 2:1 molar ratio. This Mab recognized both R-LPS and S-LPS |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab could be useful for structural studies, for detection purposes in commercial and agricultural settings, and for serological typing purposes |
| Curator ID | AA + AS |
| Date of Curation | 02-07-2011 |
| References | 10473431 |
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Department of Computational Biology, Indraprastha Institute of Information Technology, Sec - 39A, New Delhi, India - 110020 |