nHLAPred
A neural network based MHC Class-I Binding Peptide Prediction Server
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The Prediction for 30 MHC allele is based on the hybrid appoarch of artificial neural networks and Quantitative matrices. The prediction for another 37 alleles is just based on quantitative matrices.The server can run prediction for
67
MHC alleles.
Sequence Submission Form
Sequence
Paste your sequence
Or Submit Sequence
Format
Input sequence format
Amino acids in single letter code (plain text)
Standard sequence format (PIR/FASTA/EMBL etc.)
Allele selection
For multiple selection use the Alt or Meta key
ALL
HLA-A1
HLA-A2
HLA-A*0201
HLA-A*0202
HLA-A*0203
HLA-A*0205
HLA-A*0206
HLA-A2.1
HLA-A3
HLA-A*0301
HLA-A11
HLA-A*1101
HLA-A20
HLA-A24
HLA-A*2402
HLA-A31
HLA-A*3101
HLA-A*3302
HLA-A68.1
HLA-A*6801
HLA-A*6802
HLA-B7
HLA-B*0702
HLA-B8
HLA-B14
HLA-B27
HLA-B*2702
HLA-B*2705
HLA-B*3501
HLA-B*3701
HLA-B*3801
HLA-B*3901
HLA-B*3902
HLA-B40
HLA-B*4403
HLA-B*51
HLA-B*5101
HLA-B*5102
HLA-B*5103
HLA-B*5201
HLA-B*5301
HLA-B*5401
HLA-B*5801
HLA-B60
HLA-B61
HLA-B62
HLA-Cw*0301
HLA-Cw*0401
HLA-Cw*0602
HLA-Cw*0702
H2-Db
H2-Dd
H2-Ld
H2-Kb
H2-Kd
H2-Kk
HLA-G
H2-Qa
HLA-B*2706
HLA-B35
Mamu-A*01
HLA-A*0204
HLA-B*2703
HLA-B*2704
HLA-B*2902
HLA-A*3301
HLA-B44
Result
Output Display mode, select one
HTML-I
HTML-II
Tabular
Cutoff score
Filter (ANN+QM) prediction (30)
0.01
0.2
0.3
0.4
0.5
0.6
0.7
0.8
0.9
0.99
Threshold score
Filter QM based prediction(37)
1%
2%
3%
4%
5%
6%
7%
8%
9%
10%
Tabular results
Display top
Peptides
PROTEASOME AND IMMUNOPROTEASOME FILTERS
Proteasome Filter
Standard Proteasome
ON
OFF
Stringency:
1 %
2 %
3 %
4 %
5 %
6 %
7 %
8 %
9 %
10 %
Immunoproteasome Filter
Inducible Proteasome
ON
OFF
Stringency:
1 %
2 %
3 %
4 %
5 %
6 %
7 %
8 %
9 %
10 %
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