| DB ID | MyCo_5259 |
| Title | Soluble phenylpropanoids are involved in the defense response of Arabidopsis against Verticillium longisporum |
| Year | 2014 |
| PMID | 24483326 |
| Fungal Diseases involved | Fungal infection |
| Associated Medical Condition | None |
| Genus | Verticillium |
| Species | longisporum |
| Organism | Verticillium longisporum |
| Ethical Statement | None |
| Site of Infection | None |
| Opportunistic invasive | None |
| Sample type | Plant extracts |
| Sample source | Extracted RNA |
| Host Group | Plant |
| Host Common name | Arabidopsis thaliana |
| Host Scientific name | Arabidopsis thaliana |
| Biomarker Name | UGT72E3 |
| Biomarker Full Name | UDP-glycosyl transferase 72E3 |
| Biomarker Type | Diagnostic |
| Biomolecule | mRNA |
| Geographical Location | Germany |
| Cohort | Plant lines used were wild-type Arabidopsis thaliana (L.) Heynh ecotype Columbia 0 (Col 0), fah1-2 (Chapple et al., 1992), ref1-s (SALK_27911), sng1-1 (Lorenzen et al., 1996), C4H:F5H (Meyer et al., 1996), UGT72E1-OE, UGT72E2-OE and UGT73E1-OE (Lanot et al., 2006, 2008). The V. longisporum isolate Vl43 (Zeise & von Tiedemann, 2002) was obtained from A. von Tiedemann (Georg-August-University, G€ ottingen). |
| Cohort No. | None |
| Age Group | None |
| P Value | None |
| Sensitivity | None |
| Specificity | None |
| Positive Predictive Value | None |
| MIC | None |
| Fold Change | None |
| Pathway | None |
| Disease Introduction Mechanism | Verticillium longisporum is a soil-borne fungus which causes vascular disease primarily in Brassicaceae. Triggered by plant root exudates, fungal hyphae develop from microsclerotia, penetrate the root epidermis, grow through the root cortex and enter the xylem elements from where V. longisporum spreads throughout the plant. The life cycle is completed after formation of microsclerotia on senescent tissue. |
| Technique | Analytic |
| Analysis Method | UPLC-TOF-MS |
| ELISA kits | None |
| Assay Data | None |
| Validation Techniques used | UPLC-TOF-MS, qRT-PCR |
| Up Regulation Down Regulation | Induced |
| Sequence Data | None |
| External Link | None |
