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Browse result page of IndioBioDb

The total number entries retrieved from this search are 49
IDResource NameResource DescriptionResource LinkJournalClassSourceYear of PublicationPMIDCorresponding AuthorEmailInstituteCityStateFunctional StatusFunding AgencyResource categoryOther Repository
1002ir-HSPImproved Recognition of Heat Shock Proteins, Their Families and Sub-types Based On g-Spaced Di-peptide Features and Support Vector Machinehttp://cabgrid.res.in:8080/ir-hspFrontiers in geneticsProtein StructureProtein2018 29379521A R Raorao.cshl.work@gmail.comICAR - Indian Agricultural Statistics Research Institute (IASRI)New DelhiNew DelhiICARFunctionalPredictionNA
1003nifPredProteome-Wide Identification and Categorization of Nitrogen-Fixation Proteins of Diaztrophs Based on Composition-Transition-Distribution Features Using Support Vector Machinehttp://webapp.cabgrid.res.in/nifPredFrontiers in MicrobiologyProtein FunctionProtein2018 29896173A R Raorao.cshl.work@gmail.comICAR - Indian Agricultural Statistics Research Institute (IASRI)New DelhiNew DelhiICARFunctionalPredictionNA
1012CbLncRNAdbComputationally identify lncRNAs based on a proposed index and study their targeted geneshttp://cabgrid.res.in/cblncrnadbNucleic Acids ResearchGenomicsRNA2018 29753807A R Raoar.rao@icar.gov.inICAR - Indian Agricultural Statistics Research Institute (IASRI)New DelhiNew DelhiICARFunctionalDatabaseNA
1028SMMDBDatabase for small molecule modulators and their targets involved in neurological diseaseshttp://bsbe.iiti.ac.in/bsbe/smmdbDatabase: The Journal of Biological Databases and CurationCheminformaticsOther2018 30219840Amit Kumaramitk@iiti.ac.inIndian Institute of Technology (IIT I)IndoreMadhya PradeshIITFunctionalDatabaseNA
1031EMSgardeN22Database maintaining functional genomics information of Nagina 22, a popular drought- and heat-tolerant upland cultivarhttp://14.139.229.201/EMSgardeN22Frontiers in plant scienceGenomicsOther2018 30233603Amitha M V Sevanthiamithamithra.nrcpb@gmail.comICAR - National Research Centre on Plant Biotechnology (NRCPB)New DelhiNew DelhiICARFunctionalDatabaseNA
1041Indian wild Rice databaseDetailed information on 614 such diverse wild rice accessions collected from different agro-climatic zones of India, including 46 different morphological descriptors,complete passport data and DNA fingerprints.http://nksingh.nationalprof.in: 8080/iwrdb/index.jspDatabase: The Journal of Biological Databases and CurationProtein Structure Protein FunctionDNA2018 29982559Ashutosh Singhashutosh.bio@gmail.comShiv Nadar University GreaterNoidaUttar PradeshOtherFunctionalDatabaseNA
1043pStabprediction of stable mutants, unfolding curves, stability maps and protein electrostatic frustrationhttp://pbl.biotech.iitm.ac.in/pStabBioinformaticsProtein FunctionProtein2018 29092002Athi N Naganathanathi@iitm.ac.inIndian Institute of Technology (IIT M)ChennaiTamil NaduIITFunctionalPredictionNA
1045PvaxDBHelpful in identifying novel protein drug targets, expediting development of new drugs to combat malariahttp://www.scfbio-iitd.res.in/PvaxDB/Database: The Journal of Biological Databases and CurationCheminformaticsProtein2018 29688373B Jayarambjayaram@chemistry.iitd.ac.inIndian Institute of Technology (IIT D)New DelhiNew DelhiIITFunctionalDatabaseNA
1065IIKmTAIntra and inter kingdom miRNA transfer has boosted up the hypothesis about the potential impact of plant or animal miRNAs on each otherhttp://www.bioinformatics.org/iikmta/Interdisciplinary Sciences: Computational Life SciencesGenomicsRNA2018 29549628Chittabrata Malcmal@kol.amity.eduAmity UniversityKolkataWest BengalOtherFunctionalDatabaseNA
1105CRISPcutTool for designing optimal sgRNAs for CRISPR/Cas9 based experiments in human cellshttp://web.iitd.ac.in/crispcutGenomicsGenomicsRNA2018 29605634Durai Sundarsundar@dbeb.iitd.ac.inIndian Institute of Technology (IIT D)New DelhiNew DelhiIITFunctionalPredictionNA
1111MPDS-DMOpen source disease-specific web portal for diabeteshttp://www.mpds-diabetes.in/Journal of biomedical informaticsBioDrugOther2018 30092360G N Sastrygnsastry@iict.res.inCSIR - Indian Institute of Chemical Technology (CSIR-IICT)HyderabadTelanganaCSIRFunctionalDatabaseNA
1119TopicalPdbDtaabase of therapeutic peptides given through skinhttp://webs.iiitd.edu.in/raghava/topicalpdb/index.phpPLOS OneBioDrugProtein2018 29432422Gajendra PS Raghavaraghava@iiitd.ac.inIndraprastha Institute of Information Technology (IIITD)New DelhiNew DelhiIIITFunctionalDatabaseNA
1120AntifpIn Silico Approach for Prediction of Antifungal Peptideshttp://webs.iiitd.edu.in/raghava/antifpFrontiers in MicrobiologyBioDrugProtein2018 29535692Gajendra PS Raghavaraghava@iiitd.ac.inIndraprastha Institute of Information Technology (IIITD)New DelhiNew DelhiIIITFunctionalPredictionNA
1121AntiTbPdbExperimentally validated anti-tubercular and anti-mycobacterial peptideshttp://webs.iiitd.edu.in/raghava/antitbpdb/Database: The Journal of Biological Databases and CurationBioDrugProtein2018 29688365Gajendra PS Raghavaraghava@iiitd.ac.inIndraprastha Institute of Information Technology (IIITD)New DelhiNew DelhiIIITFunctionalDatabaseNA
1122CellppdMODPrediction of Cell-Penetrating Potential of Modified Peptides Containing Natural and Chemically Modified Residueshttp://webs.iiitd.edu.in/raghava/cellppdmod/Frontiers in MicrobiologyBioDrugProtein2018 29706944Gajendra PS Raghavaraghava@iiitd.ac.inIndraprastha Institute of Information Technology (IIITD)New DelhiNew DelhiIIITFunctionalPredictionNA
1123PlifePredIn silico approaches for predicting the half-life of natural and modified peptides in bloodhttp://webs.iiitd.edu.in//raghava/plifepred/PLOS OneBioDrugProtein2018 29856745Gajendra PS Raghavaraghava@iiitd.ac.inIndraprastha Institute of Information Technology (IIITD)New DelhiNew DelhiIIITFunctionalPredictionNA
1124VaxinPADComputer-aided prediction of antigen presenting cell modulators for designing peptide-based vaccine adjuvantshttp://webs.iiitd.edu.in/raghava/vaxinpad/Journal of Translational MedicineBioDrugProtein2018 29970096Gajendra PS Raghavaraghava@iiitd.ac.inIndraprastha Institute of Information Technology (IIITD)New DelhiNew DelhiIIITFunctionalPredictionBTISNet
1125AntiTbpredPrediction of Antitubercular Peptides From Sequence Information Using Ensemble Classifier and Hybrid Featureshttp://webs.iiitd.edu.in/raghava/antitbpred/Frontiers in PharmacologyBioDrugProtein2018 30210341Gajendra PS Raghavaraghava@iiitd.ac.inIndraprastha Institute of Information Technology (IIITD)New DelhiNew DelhiIIITFunctionalPredictionNA
1275FlavorDBDynamic, user-friendly interface of the resource facilitates exploration of flavor molecules for divergent applications: finding molecules matching a desired flavor or structure; exploring molecules of an ingredient; discovering novel food pairings; finding the molecular essence of food ingredients; associating chemical features with a flavor and morehttp://cosylab.iiitd.edu.in/flavordb/Nucleic Acids ResearchCheminformaticsOther2018 29059383Ganesh Baglerbagler@iiitd.ac.inIndraprastha Institute of Information Technology (IIITD)New DelhiNew DelhiIIITFunctionalDatabaseNA
1277TerezymeA predictive algorithm for identification, classification and assignment of broad substrate unit to terpene synthase (TPS) and prenyl transferase (PT) enzymes, known to generate the enormous structural and functional diversity of terpenoid compounds across the plant kingdomhttp://nipgr.res.in/terzyme.htmlBMC BioinformaticsProtein Function CheminformaticsProtein2018 29339971Gitanjali Yadavgy@nipgr.ac.inDBT - National Institute of Plant Genome Research (NIPGR)New DelhiNew DelhiDBTFunctionalDatabaseNA
1293LeptoDBLeptoDB facilitates well-structured knowledge of genomics, proteomics and therapeutic aspects with more than 500 assemblies including 17 complete and 496 draft genomes encoding 1.7 million proteins for 23 Leptospira species with more than 250 serovars comprising pathogenic, intermediate and saprophytic strainshttp://leptonet.org.inDatabase: The Journal of Biological Databases and CurationGenomics VaccinomicsProtein2018 29905762Jayashankar Dasjayshankardas@gmail.comGujarat Biotechnology Research CentreGandhinagarGujratOtherFunctionalDatabaseNA
1303Glaucoma PredGlaucoma prediction based on Myocilin genotype and phenotype informationhttp://bioserver1.physics.iisc.ac.in/myocilinGenomicsGenomicsOther2018 29665417K Sekarsekar@iisc.ac.inIndian Institute of Science (IISc)BangaloreKarnatakaIIScFunctionalPredictionNA
1315PDZscapeEncompasses the complete available information on 58,648 PDZ-containing proteins with their known and putative binding partners on one platformhttp://www.actrec.gov.in:8080/pdzscape/BMC BioinformaticsProtein StructureProtein2018 29699484Kakoli Bosekbose@actrec.gov.inAdvanced Centre for Treatment Research and Education in Cancer (ACTREC) Tata Memorial CentreMumbaiMaharashtraACTRECFunctionalDatabaseNA
1336PPInsA repository of protein-protein interaction sitesbasehttp://www.cup.edu.in:99/ppins/home.phpScientific ReportsInteractomeProtein2018 30127348Mahesh Kulhariakulharia@gmail.comCentral University of Punjab (CUP)BathindaPunjabOtherFunctionalDatabaseNA
1341aBiofilmHarbors a database, a predictor, and the data visualization moduleshttp://bioinfo.imtech.res.in/manojk/abiofilm/Nucleic Acids ResearchCheminformaticsOther2018 29156005Manoj Kumarmanojk@imtech.res.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalDatabaseNA
1342HIVprotIan integrated web based platform for prediction and design of HIV proteins inhibitorshttp://bioinfo.imtech.res.in/manojk/hivprotiFrontiers in geneticsCheminformaticsProtein2018 29524011Manoj Kumarmanojk@imtech.res.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalPredictionbio.tools
1343saRNAdbContains 2150 manually curated saRNA entries with detailed information about their nucleotide sequences, activities, corresponding target gene, promoter and other experimental data. Besides, saRNA-promoter binding location, predicted saRNA features, tools (off-target, map) and RNAa-related proteins with their interacting partners are providedhttp://bioinfo.imtech.res.in/manojk/sarna/ebb.phpJournal of molecular biologyGenomicsRNA2018 29625201Manoj Kumarmanojk@imtech.res.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalDatabaseNA
1363MutHTPContains information on 183 395 disease-associated and 17 827 neutral mutations in human transmembrane proteinshttp://www.iitm.ac.in/bioinfo/MutHTP/BioinformaticsProtein StructureProtein2018 29401218Michael Gromihagromiha@iitm.ac.inIndian Institute of Technology (IIT M)ChennaiTamil NaduIITFunctionalDatabaseNA
1393PtRFdbDetailed and comprehensive information is available for each tRF entryhttp://www.nipgr.res.in/PtRFdb/.Database: The Journal of Biological Databases and CurationGenomicsOther2018 29939244Shailesh Kumarshailesh@nipgr.ac.inNIPGR - National Institute of Plant Genome ResearchNew DelhiNew DelhiNIPGRFunctionalDatabaseNA
1396miRwayCollects an exhaustive list of miRNA-pathway association entries for 76 critical disease conditions by reviewing 663 published articleshttp://www.mirway.iitkgp.ac.in/Database: The Journal of Biological Databases and CurationGenomicsRNA2018 29688364Nishant Chakravortynishant@smst.iitkgp.ernet.inIndian Institute of Technology (IIT KGP)KharagpurWest BengalIITFunctionalDatabaseNA
1406HYPOA database of hypothetical human proteinshttp://www.bioclues.org/hypo2Protein and peptide lettersProtein StructureProtein2018 30152276Pawan Dharpawandhar@gmail.comJawaharlal Nehru University (JNU)New DelhiNew DelhiJNUFunctionalDatabaseNA
1410ESCC ATLASFacilitates the exploration and the analysis of genes among different populationshttp://www.esccatlas.orgScientific ReportsGenomicsDNA2018 30143675Prashantha Hebbar Manoj Kumar Kashyapphebbar@mbiomics.org manojkkashyap@gmail.comManipal UniversityManipalKarnatakaOtherFunctionalDatabaseNA
1444dbSweetDesign mutational experiments and simulation studies that will aid to advance our understanding of the physiological role of SWEET homologshttp://bioinfo.iitk.ac.in/bioinfo/dbsweet/HomeJournal of molecular biologyProtein FunctionOther2018 29665371Ramasubbu Sankararamakrishnansankar@iitk.ac.inIndian Institute of Technology (IIT K)KanpurUttar PradeshIITFunctionalDatabaseNA
1456FilTer BaSeHosts a database that enables efficient searching the chemical space of around 348,000 compounds on the basis of physicochemical and substructure propertieshttp://bioinfo.net.in/filterbase/Journal of molecular graphics and modelingCheminformaticsOther2018 29328995Rohan J Meshramrohan@bioinfo.net.inUniversity of PunePuneMaharashtraOtherFunctionalDatabaseNA
1466KELM-CPPpredKernel Extreme Learning Machine Based Prediction Model for Cell-Penetrating Peptideshttp://sairam.people.iitgn.ac.in/KELM-CPPpred.htmlJournal of proteome researchBioDrugProtein2018 30032609Sairam S Mallajosyulamsairam@iitgn.ac.inIndian Institute of Technology (IIT Gn)GandhinagarGujratIITFunctionalPredictionNA
1469wwPDBAtomic co-ordinates and structure factors for I249T mutant of human CTSK (codes 5Z5O) have been deposited in the Protein Data Bankhttp://wwpdb.org/The FEBS journalProtein Structure GenomicsProtein2018 30199612Sampa Biswassampa.sinp@gmail.comSaha Institute of Nuclear PhysicsKolkataWest BengalOtherFunctionalDatabaseNA
1471PanGFR-HMA Dynamic Web Resource for Pan-Genomic and Functional Profiling of Human Microbiome With Comparative Featureshttp://www.bioinfo.iicb.res.in/pangfr-hm/Frontiers in MicrobiologyGenomicsDNA2018 30349509Sandip Paulsandippaul@iicb.res.inCSIR - Indian Institute of Chemical Biology (CSIR-IICB)KolkataWest BengalCSIRFunctionalDatabaseNA
1476PHPT RegistryPrimary hyperparathyroidism: insights from the Indian PHPT registryhttp://www.indianphptregistry.com/Journal of bone and mineral metabolismGenomicsOther2018 28364324Sanjay Kumar Bhadadabhadadask@rediffmail.comPostgraduate Institute of Medical Education and Research (PGIMER)ChandigarhChandigarhOtherFunctionalPredictionNA
1484Oxypred2Harnessing the evolutionary information on oxygen binding proteins through Support Vector Machines based moduleshttp://bioinfo.imtech.res.in/servers/muthu/oxypred2/home.htmlBMC Research NotesProtein FunctionProtein2018 29751818Selvaraj Muthukrishnan Munish Purimuthu@imtech.res.in mpuri@pbi.ac.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalPredictionNA
1485NetpathManually curated resources of pathways in humanshttp://www.netpath.org/pathways?path_id=NetPath_172Journal of cell communication and signallingInteractomeOther2018 30084000Shaida Andrabi Yashwanth Subbannayyashaida.andrabi@uok.edu.in yashwanth@yenepoya.edu.inUniversity of KashmirKashmirJammu and KashmirOtherFunctionalDatabaseNA
1487PVsiRNAdbA database for plant exclusive virus-derived small interfering RNAshttp://www.nipgr.res.in/PVsiRNAdbDatabase: The Journal of Biological Databases and CurationGenomicsRNA2018 30307523Shailesh Kumarshailesh@nipgr.ac.inDBT - National Institute of Plant Genome Research (NIPGR)New DelhiNew DelhiDBTFunctionalDatabaseNA
1497ILDgenDBFacilitates graphical view of predicted DCGs-SNPs/miRNAs and literature associated DCGs-ILDs interactions for each ILD to facilitate efficient data interpretation. Outcomes of analyses suggested the significant involvement of immune system and defense mechanisms in ILDs pathogenesis.http://14.139.240.55/ildgendb/index.phpDatabase: The Journal of Biological Databases and CurationGenomicsRNA2018 29897484Smriti Mishrasmriti.mishra1906@gmail.comJaypee University of Information Technology (JUIT)SolanHimachal PradeshJUITFunctionalDatabaseNA
1533FrameOUTA method for analysing frame shift mutationshttp://bioinfoindia.org/frameout/International Journal for Computational BiologyGenomicsOther2018 NATiratha Raj Singhtiratharaj@gmail.comJaypee University of Information Technology (JUIT)SolanHimachal PradeshJUITFunctionalPredictionNA
1546CellAtlasSearchCellAtlasSearch features over 300 000 reference expression profiles including both bulk and single-cell datahttp://www.cellatlassearch.com/Nucleic Acids ResearchGenomicsDNA2018 29788498Vibhor Kumar Debarka Senguptavibhor@iiitd.ac.in debarka@iiitd.ac.inIndraprastha Institute of Information Technology (IIITD)New DelhiNew DelhiIIITFunctionalDatabaseNA
1562AromaDbA Database of Medicinal and Aromatic Plant's Aroma Molecules With Phytochemistry and Therapeutic Potentialshttp://bioinfo.cimap.res.in/aromadb/Frontiers in plant scienceCheminformaticsOther2018 30150996Feroz Khanf.khan@cimap.res.inCSIR - Central Institute of Medicinal and Aromatic Plants (CSIR-CIMAP)LucknowUttar PradeshCSIRNon-FunctionalDatabaseNA
1572BlaPredPredicting and classifying β-lactamase using a 3-tier prediction system via Chou's general PseAAChttp://proteininformatics.org/mkumar/blapredJournal of theoretical biologyProtein FunctionOther2018 30138632Manish Kumarmanish@south.du.ac.inUniversity of Delhi (DU) South CampusNew DelhiNew DelhiDUNon-FunctionalPredictionNA
1575SubMitoPredProteome-wide prediction and annotation of mitochondrial and sub-mitochondrial proteins by incorporating domain informationhttp://proteininformatics.org/mkumar/submitopred/MitochondrionProtein FunctionProtein2018 29032233Manish Kumarmanish@south.du.ac.inUniversity of Delhi (DU) South CampusNew DelhiNew DelhiDUNon-FunctionalPredictionNA
1576ZincBinderPrediction of zinc binding sites in proteins using sequence derived informationhttp://proteininformatics.org/mkumar/znbinder/Journal of biomolecular structure and dynamicsInteractomeProtein2018 29241411Manish Kumarmanish@south.du.ac.inUniversity of Delhi (DU) South CampusNew DelhiNew DelhiDUNon-FunctionalPredictionNA
1578MODIIDeveloped with a holistic approach for collecting information about phenomic and genomic information of agriculturally important insectshttp://cib.res.in/database.phpBioinformationGenomicsDNA2018 29618898Maria Pratheepampratheepa@gmail.comICAR - National Bureau of Agricultural Insect Resources (NBAIR)BangaloreKarnatakaICARNon-FunctionalDatabaseNA