The total number entries retrieved from this search are 52

ID	Resource Name	Resource Description	Resource Link	Journal	Class	Source	Year of Publication	PMID	Corresponding Author	Email	Institute	City	State	Functional Status	Funding Agency	Resource category	Other Repository
1014	PPDB	A tool for investigation of plants physiology based on gene ontology	http://www.iitr.ernet.in/ajayshiv/	Interdisciplinary Sciences: Computational Life Sciences	Protein Function	DNA	2015	25183354	Ajay Shiv Sharma	2ajayshiv@gmail.com	Indian Institute of Technology (IIT R)	Roorkee	Uttarakhand	IIT	Functional	Database	NA
1022	PHYSICO2	An UNIX based standalone procedure for computation of physicochemical, window-dependent and substitution based evolutionary properties of protein sequences along with automated block preparation tool, version 2	http://sourceforge.net/projects/physico2/	Bioinformation	Protein Function	Protein	2015	26339154	Amal Kumar Bandyopadhyay	akbanerjee@biotech.buruniv.ac.in	The University of Burdwan	Burdwan	West Bengal	Other	Functional	Prediction	bio.tools
1023	ADSBET2	Automated Determination of Salt-Bridge Energy-Terms version 2	http://sourceforge.net/projects/ADSBET2/	Bioinformation	Interactome	Other	2015	26420923	Amal Kumar Bandyopadhyay	akbanerjee@biotech.buruniv.ac.in	The University of Burdwan	Burdwan	West Bengal	Other	Functional	Database	NA
1024	SBION2	A method for analysing salt bridges from multiple files	https://sourceforge.net/projects/sbion2/	Bioinformation	Protein Structure	Protein	2015	25780279	Amal Kumar Bandyopadhyay	akbanerjee@biotech.buruniv.ac.in	The University of Burdwan	Burdwan	West Bengal	Other	Functional	Prediction	NA
1026	HPVdetector	NGS-based approach to determine the presence of HPV and their sites of integration in human cancer genome	http://www.actrec.gov.in/pi-webpages/AmitDutt/HPVdetector/HPVDetector.html	British journal of cancer	Vaccinomics Interactome Genomics	DNA	2015	25973533	Amit Dutt	adutt@actrec.gov.in	Advanced Centre for Treatment Research and Education in Cancer (ACTREC) Tata Memorial Centre	Mumbai	Maharashtra	ACTREC	Functional	Prediction	NA
1037	RxnSim	A tool to compare biochemical reactions	http://cran.r-project.org/web/packages/RxnSim/	Bioinformatics	Cheminformatics	Other	2015	26187943	Anirban Bhaduri	anirban.b@samsung.com	Samsung Advanced Institute of Technology	Bangalore	Karnataka	Other	Functional	Prediction	bio.tools
1048	RM2TS	Web server to convert a tertiary structure to an alphanumeric string and to predict the tertiary structure from the sequence of a protein	http://www.scfbio-iitd.res.in/software/proteomics/rm2ts.jsp	The journal of physical chemsitry	Protein Structure	Protein	2015	26098815	B Jayaram	bjayaram@chemistry.iitd.ac.in	Indian Institute of Technology (IIT D)	New Delhi	New Delhi	IIT	Functional	Prediction	BTISNet
1071	novPTMenzy	A database for enzymes involved in novel post-translational modifications	http://www.nii.ac.in/novptmenzy.html	Database: The Journal of Biological Databases and Curation	Protein Structure Cheminformatics	RNA	2015	25931459	Debasisa Mohanty	deb@nii.res.in	DBT - National Institute of Immunology (NII)	New Delhi	New Delhi	DBT	Functional	Database	NA
1080	RNABP COGEST	A resource for investigating functional RNAs	http://bioinf.iiit.ac.in/RNABPCOGEST/	Database: The Journal of Biological Databases and Curation	Protein Function	RNA	2015	25776022	Dhananjay Bhattacharyya	dhananjay.bhattacharyya@saha.ac.in	Saha Institute of Nuclear Physics	Kolkata	West Bengal	Other	Functional	Database	NA
1085	m3db	Consists of results from the analysis presented here, integrated with cytoscape web and user-friendly tools for visualization, retrieval and further analysis	http://bioinfo.icgeb.res.in/m3db/.	PLOS One	Interactome	Other	2015	26558755	Dinesh Gupta	dinesh@icgeb.res.in	DBT - International Centre for Genetic Engineering and Biotechnology (ICGEB)	New Delhi	New Delhi	DBT	Functional	Database	BTISNet
1086	miRMOD	A tool for identification and analysis of 5 and 3 miRNA modifications in Next Generation Sequencing small RNA data	http://bioinfo.icgeb.res.in/miRMOD/	Peer J	Genomics	RNA	2015	26623179	Dinesh Gupta	dinesh@icgeb.res.in	DBT - International Centre for Genetic Engineering and Biotechnology (ICGEB)	New Delhi	New Delhi	DBT	Functional	Prediction	bio.tools
1100	SBMDb	First whole genome putative microsatellite DNA marker database of sugarbeet for bioenergy and industrial applications	http://webapp.cabgrid.res.in/sbmdb/.	Database: The Journal of Biological Databases and Curation	Genomics	DNA	2015	26647370	Dinesh Kumar	dineshkumarbhu@gmail.com	ICAR - Indian Agricultural Statistics Research Institute (IASRI)	New Delhi	New Delhi	ICAR	Functional	Database	NA
1146	HSLpred	Prediction of subcellular localization of human proteins with high accuracy	http://webs.iiitd.edu.in/raghava/hslpred/	The Journal of Biological Chemistry	Protein Function	Protein	2015	15647269	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	bio.tools, BTISNet
1147	CancerPPD	Database of anticancer peptides and proteins	http://webs.iiitd.edu.in/raghava/cancerppd/	Nucleic Acids Research	BioDrug	Protein	2015	25270878	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Database	bio.tools, BTISNet
1148	AHTPDB	Comprehensive platform for analysis and presentation of antihypertensive peptides	http://webs.iiitd.edu.in/raghava/ahtpdb/	Nucleic Acids Research	BioDrug	Protein	2015	25392419	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Database	bio.tools, BTISNet
1149	RNApin	Identification of protein-interacting nucleotides in a RNA sequence using composition profile of tri-nucleotides	http://webs.iiitd.edu.in/oscadd/egfrpred/	Genomics	Interactome	RNA	2015	25640448	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	BTISNet
1150	BetaTPred3	Statistical-based method for predicting Beta Turns in a protein	http://webs.iiitd.edu.in/raghava/betatpred/	Proteins	Protein Structure	Protein	2015	25728793	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	NA
1151	EGFRpred	QSAR based model for discriminating EGFR inhibitors and non-inhibitors using Random forest	http://webs.iiitd.edu.in/oscadd/egfrpred/	Biology Direct	Cheminformatics	Other	2015	25880749	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	BTISNet
1152	XIAPin	Designing of efficient inhibitors against apoptosis protein XIAP (inhibitor against drug resistance cancer)	http://webs.iiitd.edu.in/oscadd/xiapin/	Current cancer drug targets	Cheminformatics	Protein	2015	26143944	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	NA
1153	VaccineDA	Prediction, design and genome-wide screening of oligodeoxynucleotide-based vaccine adjuvants	http://webs.iiitd.edu.in/raghava/vaccineda/	Scientific Reports	Vaccinomics	Other	2015	26212482	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	BTISNet
1154	AHTpin	Designing and virtual screening of antihypertensive peptides	http://webs.iiitd.edu.in/raghava/ahtpin/	Scientific Reports	BioDrug	Protein	2015	26213115	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	BTISNet
1155	PEPstrMOD	Structure prediction of peptides containing natural, non-natural and modified residues	http://webs.iiitd.edu.in/raghava/pepstrmod/	Biology Direct	Protein Structure	Protein	2015	26690490	Gajendra PS Raghava	raghava@iiitd.ac.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	NA
1282	NNvPDB	Neural Network based Protein Secondary Structure Prediction with PDB Validation	http://bit.srmuniv.ac.in/cgi-bin/bit/cfpdb/nnsecstruct.pl	Bioinformation	Protein Structure	Protein	2015	26420924	Habeeb SKM	habeeb_skm@yahoo.co.in	SRM Institute of Science and Technology	Kattankulathur	Tamil Nadu	Other	Functional	Prediction	NA
1283	Hu-Vir	Molecular principles of human virus protein-protein interactions	http://cdfd.org.in/labpages/computational_biology_datasets.html	Bioinformatics	Interactome	Protein	2015	25417202	Hampapathalu A Nagarajaram	han@cdfd.org.in	CSIR - Centre for DNA Fingerprinting and Diagnostics (CSIR-CDFD)	Hyderabad	Telangana	CSIR	Functional	Prediction	NA
1287	matK-QR classifier	A patterns based approach for plant species identification	http://www.neeri.res.in/matk_classifier/index.htm	Biodata Mining	Genomics	Other	2015	27990177	Hemant J Purohit	hj_purohit@neeri.res.in	CSIR - National Environmental Engineering Research Institute (CSIR-NEERI)	Nagpur	Maharashtra	CSIR	Functional	Prediction	NA
1294	DBDiaSNP	An Open-Source Knowledgebase of Genetic Polymorphisms and Resistance Genes Related to Diarrheal Pathogens	http://www.juit.ac.in/attachments/dbdiasnp/	Omics	Cheminformatics Genomics	DNA	2015	25978092	Jayashree Ramana	jayashree.ramana@juit.ac.in	Jaypee University of Information Technology (JUIT)	Solan	Himachal Pradesh	JUIT	Functional	Database	NA
1320	GREAM	A Web Server to Short-List Potentially Important Genomic Repeat Elements Based on Over-/Under-Representation in Specific Chromosomal Locations, Such as the Gene Neighborhoods, within or across 17 Mammalian Species	http://resource.ibab.ac.in/GREAM/	PLOS One	Genomics	DNA	2015	26208093	Kshitish K Acharya	kshitish@ibab.ac.in	Institute of Bioinformatics and Applied Biotechnology (IBAB)	Bangalore	Karnataka	IBAB	Functional	Prediction	bio.tools
1350	QSPpred	Prediction and analysis of quorum sensing peptides based on sequence features	http://crdd.osdd.net/servers/qsppred	PLOS One	BioDrug	Protein	2015	25781990	Manoj Kumar	manojk@imtech.res.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	NA
1351	AVP-IC50 Pred	Multiple machine learning techniques-based prediction of peptide antiviral activity in terms of half maximal inhibitory concentration	http://crdd.osdd.net/servers/ic50avp	Biopolymers	BioDrug	Protein	2015	26213387	Manoj Kumar	manojk@imtech.res.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	NA
1359	HPVbase	A knowledgebase of viral integrations, methylation patterns and microRNAs aberrant expression: As potential biomarkers for Human papillomaviruses mediated carcinomas	http://crdd.osdd.net/servers/hpvbase/	Scientific Reports	Genomics	RNA	2015	26205472	Manoj Kumar	manojk@imtech.res.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	NA
1369	Folding RaCe	Method for predicting changes in protein folding rates upon point mutations	http://www.iitm.ac.in/bioinfo/proteinfolding/foldingrace.html	Bioinformatics	Protein Structure	Protein	2015	25686635	Michael Gromiha	gromiha@iitm.ac.in	Indian Institute of Technology (IIT M)	Chennai	Tamil Nadu	IIT	Functional	Prediction	NA
1370	DIM-Pred	Prediction of protein disorder on amino acid substitutions	http://www.iitm.ac.in/bioinfo/DIM_Pred/	Analytical biochemistry	Protein Structure	Protein	2015	26348538	Michael Gromiha	gromiha@iitm.ac.in	Indian Institute of Technology (IIT M)	Chennai	Tamil Nadu	IIT	Functional	Prediction	NA
1380	CTDB	An Integrated Chickpea Transcriptome Database for Functional and Applied Genomics	http://nipgr.res.in/ctdb.html	PLOS One	Genomics	DNA	2015	26322998	Mukesh Jain	mjain@nipgr.ac.in	DBT - National Institute of Plant Genome Research (NIPGR)	New Delhi	New Delhi	DBT	Functional	Database	NA
1385	NrichD	Sequence databases enriched with computationally designed protein-like sequences aid in remote homology detection	http://proline.biochem.iisc.ernet.in/NRICHD/	Nucleic Acids Research	Protein Structure	Protein	2015	25262355	N Srinivasan	ns@mbu.iisc.ernet.in	Indian Institute of Science (IISc)	Bangalore	Karnataka	IISc	Functional	Database	NA
1408	MaxMod	A hidden Markov model based novel interface to MODELLER for improved prediction of protein 3D models	http://www.immt.res.in/maxmod/	Journal of Molecular Modeling	Protein Structure	Protein	2015	25636267	Prasanna K Panda	pkpan@yahoo.com	CSIR - Institute of Minerals and Materials Technology (CSIR-IMMT)	Bhubaneswar	Odisha	CSIR	Functional	Prediction	NA
1415	CicaArVarDB	NP and InDel database for advancing genetics research and breeding applications in chickpea	http://cicarvardb.icrisat.org	Database: The Journal of Biological Databases and Curation	Genomics	Other	2015	26289427	Rajeev K Varshney	r.k.varshney@cgiar.org	International Crops Research Institute for the Semi-Arid Tropics (ICRISAT)	Hyderabad	Telangana	Other	Functional	Database	NA
1422	DOCKSCORE	A webserver for ranking protein-protein docked poses	http://caps.ncbs.res.in/dockscore/	BMC Bioinformatics	Protein Structure Protein Function	Protein	2015	25902779	Ramanathan Sowdhamini	mini@ncbs.res	National Center for Biological Sciences (NCBS)	Bangalore	Karnataka	NCBS	Functional	Prediction	NA
1441	PPCheck	A webserver for identification of non-covalent interactions at the interface of a protein-protein complex	http://caps.ncbs.res.in/ppcheck/	Bioinformatics and biology insights	Protein Function	Protein	2015	26448684	Ramanathan Sowdhamini	mini@ncbs.res.in	National Center for Biological Sciences (NCBS)	Bangalore	Karnataka	NCBS	Functional	Prediction	bio.tools
1448	Layers	A molecular surface peeling algorithm and its applications to analyze protein structures	http://www.csb.iitkgp.ac.in/applications/mol_layers/main	Scientific Reports	Protein Structure Protein Function	Protein	2015	26553411	Ranjit Prasad Bahadur	r.bahadur@hijli.iitkgp.ernet.in	Indian Institute of Technology (IIT KGP)	Kharagpur	West Bengal	IIT	Functional	Prediction	NA
1453	OpsiD	Tool for designing optimized siRNA	http://opsid.in/opsid/	Gene	Genomics	RNA	2015	25725126	Reena Murali	reena.rajesh@rit.ac.in	DBT - Rajiv Gandhi Centre for Biotechnology (RGCB)	Thiruvananthapuram	Kerala	DBT	Functional	Prediction	NA
1472	BioDB extractor	Customized data extraction system for commonly used bioinformatics databases	http://bioinfo.net.in/BioDB/Home.html	Biodata Mining	Protein Function	Other	2015	26516349	Sangeeta Sawant	sangeeta@bioinfo.net.in	Savitribai Phule Pune University	Pune	Maharashtra	Other	Functional	Database	NA
1473	MBSTAR	Multiple instance learning for predicting specific functional binding sites in microRNA targets	http://www.isical.ac.in/~bioinfo_miu/MBStar30.htm	Scientific Reports	Protein Function	RNA	2015	25614300	Sanghamitra Bandyopadhyay	sanghami@isical.ac.in	Indian Statistical Institute (ISI)	Kolkata	West Bengal	ISI	Functional	Prediction	bio.tools
1478	EnPPIpred	Prediction of Intra-Species Protein-Protein Interactions in Enteropathogens Facilitating Systems Biology Study	http://bicresources.jcbose.ac.in/ssaha4/EnPPIpred/	PLOS One	Interactome	Protein	2015	26717407	Santasabuj Das Sudipto Saha	dasss@icmr.org.in ssaha4@jcbose.ac.in	ICMR - National Institute of Cholera and Enteric Diseases (NICED)	Kolkata	West Bengal	ICMR	Functional	Prediction	NA
1483	U-care	User-friendly Comprehensive Antibiotic resistance Repository of Escherichia coli	http://www.e-bioinformatics.net/ucare/	Journal of clinical pathology	Cheminformatics	Protein	2015	25935546	Saurav B Saha	saurav.saha@shiats.edu.in	SHIATS	Allahabad	Uttar Pradesh	Other	Functional	Database	NA
1490	MMNDB	Mammalian Mitochondriaal ncRNA databsase	http://www.iitm.ac.in/bioinfo/mmndb/	Bioinformation	Genomics	RNA	2015	26912953	Shanmugam Anandakumar	bioinfoanand@gmail.com	Indian Institute of Technology (IITM)	Chennai	Tamil Nadu	IIT	Functional	Database	NA
1499	zf-lncRNApedia	A Comprehensive Online Resource for Zebrafish Long Non-Coding RNAs	http://genome.igib.res.in/zflncRNApedia/	PLOS One	Genomics	RNA	2015	26065909	Sridhar Sivasubbu Vinod Scaria	s.sivasubbu@igib.res.in vinods@igib.res.in	CSIR - Institute of Genomics and Integrative Biology (CSIR-IGIB)	New Delhi	New Delhi	CSIR	Functional	Prediction	NA
1509	AntiAngioPred	A Server for Prediction of Anti-Angiogenic Peptides	http://crdd.osdd.net/raghava/antiangiopred/	PLOS One	BioDrug	Protein	2015	26335203	Subramanian Venkatesan	subbu@clri.res.in	CSIR - Central Leather Research Institute (CSIR-CLRI)	Chennai	Tamil Nadu	CSIR	Functional	Prediction	bio.tools
1512	LMPID	A manually curated database of linear motifs mediating protein-protein interactions	http://bicresources.jcbose.ac.in/ssaha4/lmpid/	Database: The Journal of Biological Databases and Curation	Interactome	Protein	2015	25776024	Sudipto Saha	ssaha4@jcbose.ac.in	Bose Institute	Kolkata	West Bengal	Other	Functional	Database	NA
1551	16S classifier	A tool for fast and accurate taxonomic classification of 16S rRNA hypervariable regions in metagenomic datasets	http://metabiosys.iiserb.ac.in/16Sclassifier	PLOS One	Genomics	RNA	2015	25646627	Vineet K Sharma	vineetks@iiserb.ac.in	Indian Institute of Science Education and Research (IISERB)	Bhopal	Madhya Pradesh	IISER	Functional	Prediction	NA
1554	CARDIO-PRED	An in silico tool for predicting cardiovascular-disorder associated proteins	http://genomeinformatics.dtu.ac.in/CARDIO-PRED/	Systems and synthetic biology	Protein Structure	Protein	2015	25972989	Yasha Hasija	yashahasija@gmail.com	Delhi Technological University (DTU)	New Delhi	New Delhi	DTU	Functional	Prediction	NA