Browse result page of IndioBioDb
The total number entries retrieved from this search are 66
| ID | Resource Name | Resource Description | Resource Link | Journal | Class | Source | Year of Publication | PMID | Corresponding Author | Institute | City | State | Functional Status | Funding Agency | Resource category | Other Repository | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1010 | dSSpred | A statistical approach for 5' splice site prediction using short sequence motifs and without encoding sequence data | http://cabgrid.res.in:8080/sspred | BMC Bioinformatics | Genomics | DNA | 2014 | 25420551 | A R Rao | rao.cshl.work@gmail.com | ICAR - Indian Agricultural Statistics Research Institute (IASRI) | New Delhi | New Delhi | ICAR | Functional | Prediction | NA |
| 1033 | SPGDB | Database for strain specific comparative analysis of Streptococcus pneumoniae genes and proteins | http://pranag.physics.iisc.ernet.in/SPGDB/ | Genomics | Protein Function | Protein | 2014 | 25269378 | Anand Anbarasu | aanand@vit.ac.in | VIT University | Vellore | Tamil Nadu | VIT | Functional | Database | NA |
| 1034 | HIGDB | A single point web resource for Haemophilus influenzae | http://bioserver1.physics.iisc.ernet.in/HIGDB/ | Computers in biology and medicine | Protein Structure Protein Function | Other | 2014 | 25450223 | Anand Anbarasu | aanand@vit.ac.in | VIT University | Vellore | Tamil Nadu | VIT | Functional | Database | bio.tools |
| 1049 | D2N | New avenue towards assigning reliable structures to whole proteomes even in the absence of experimentally determined native structures | http://www.scfbio-iitd.res.in/software/d2n.jsp | Bioichimica et biophysics acta | Protein Structure | Protein | 2014 | 25062912 | B Jayaram | bjayaram@chemistry.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Prediction | NA |
| 1062 | PRIGSA | Protein repeat identification by graph spectral analysis | http://bioinf.iiit.ac.in/PRIGSA/ | Journal of bioinformatics and computational biology | Genomics | Protein | 2014 | 25385083 | Broto Chakrabarty Nita Parekh | broto.chakrabarty@research.iiit.ac.in nita@iiit.ac.in | International Institute of Information Technology (IIITH) | Hyderabad | Telangana | IIIT | Functional | Prediction | NA |
| 1066 | TBXpredict | Role of Gist and PHOG features in computer-aided diagnosis of tuberculosis without segmentation | http://sourceforge.net/projects/tbxpredict/ | Biology Direct | Cheminformatics | Other | 2014 | 25390291 | Chittaranjan Rout | chittaranjan.rout@juit.ac.in | Jaypee University of Information Technology (JUIT) | Solan | Himachal Pradesh | JUIT | Functional | Prediction | NA |
| 1072 | PhosNetConstruct | Deciphering kinase-substrate relationships by analysis of domain-specific phosphorylation network | http://www.nii.ac.in/phosnetconstruct.html | Bioinformatics | Interactome | Other | 2014 | 24574117 | Debasisa Mohanty | deb@nii.res.in | DBT - National Institute of Immunology (NII) | New Delhi | New Delhi | DBT | Functional | Prediction | NA |
| 1087 | plantVSupPred | Supervised learning classification models for prediction of plant virus encoded RNA silencing suppressors | http://bioinfo.icgeb.res.in/pvsup/ | PLOS One | Genomics | RNA | 2014 | 24828116 | Dinesh Gupta | dinesh@icgeb.res.in | DBT - International Centre for Genetic Engineering and Biotechnology (ICGEB) | New Delhi | New Delhi | DBT | Functional | Prediction | NA |
| 1156 | PCMdb | Pancreatic cancer methylation database | http://webs.iiitd.edu.in/raghava/pcmdb/ | Scientific Reports | Genomics | Other | 2014 | 24569397 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
| 1157 | HemolytiK | A database of experimentally determined hemolytic and non-hemolytic peptides | http://webs.iiitd.edu.in/raghava/hemolytik/ | Nucleic Acids Research | BioDrug | Protein | 2014 | 24174543 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | bio.tools, BTISNet |
| 1158 | RNAcon | Prediction and classification of ncRNAs using structural information | http://webs.iiitd.edu.in/raghava/rnacon/ | BMC Genomics | Vaccinomics | RNA | 2014 | 24521294 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | NA |
| 1159 | EGFRindb | A database of EGF(Epidermal Growth Factor) receptors (anticaner database) | http://webs.iiitd.edu.in/raghava/egfrindb/ | Anticancer agents in medicinal chemsitry | Cheminformatics | Protein | 2014 | 24661111 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
| 1160 | HerceptinR | Information about assays performend to test sensitivity/resistance of Herceptin Antibodies | http://webs.iiitd.edu.in/raghava/herceptinr/ | Scientific Reports | Vaccinomics | Protein | 2014 | 24670875 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
| 1161 | DiPCell | Designing of inhibitors against pancreatic cancer cell lines. | http://webs.iiitd.edu.in/raghava/dipcell/ | Scientific Reports | Cheminformatics Vaccinomics | Other | 2014 | 24728108 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
| 1162 | ParaPep | A web resource for experimentally validated antiparasitic peptide sequences and their structures | http://webs.iiitd.edu.in/raghava/parapep/ | Database: The Journal of Biological Databases and Curation | BioDrug | Protein | 2014 | 24923818 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | BTISNet |
| 1163 | ntEGFR | QSAR-Based Models for designing inhibitors against Wild and Mutant EGFR (anti-cancer drug) | http://webs.iiitd.edu.in/oscadd/ntegfr/ | PLOS One | Cheminformatics | Other | 2014 | 24992720 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
| 1164 | HLP | Designing of peptides with desired half-life in intestine-like environment | http://webs.iiitd.edu.in/raghava/hlp/ | BMC Bioinformatics | BioDrug | Protein | 2014 | 25141912 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
| 1165 | tRNAmod | Prediction of uridine modifications in tRNA sequences | http://webs.iiitd.edu.in/raghava/trnamod/ | BMC Bioinformatics | Vaccinomics Interactome | RNA | 2014 | 25272949 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
| 1279 | EssOilDB | Database of essential oils reflecting terpene composition and variability in the plant kingdom | http://nipgr.res.in/Essoildb/ | Database: The Journal of Biological Databases and Curation | Cheminformatics | Other | 2014 | 25534749 | Gitanjali Yadav | gy@nipgr.ac.in | DBT - National Institute of Plant Genome Research (NIPGR) | New Delhi | New Delhi | DBT | Functional | Database | NA |
| 1284 | MICdb3.0 | A comprehensive resource of microsatellite repeats from prokaryotic genomes | http://www.cdfd.org.in/micas | Database: The Journal of Biological Databases and Curation | Genomics | DNA | 2014 | 24536078 | Hampapathalu A Nagarajaram | han@cdfd.org.in | Grandhi Varalakshmi Venkatarao Institute of Technology | Bhimavaram | Andhra Pradesh | Other | Functional | Database | NA |
| 1297 | lnCeDB | Database of human long noncoding RNA acting as competing endogenous RNA | http://gyanxet-beta.com/lncedb/ | PLOS One | Genomics | RNA | 2014 | 24926662 | Jayprokas Chakrabarti | j.chakrabarti@gyanxet.com | Indian Association for the Cultivation of Science (IACS) | Kolkata | West Bengal | IACS | Functional | Database | NA |
| 1298 | HumanVice | Host ceRNA network in virus infected cells in human | http://gyanxet-beta.com/humanvice/ | Fontiers in genetics | Interactome | RNA | 2014 | 25120561 | Jayprokas Chakrabarti | j.chakrabarti@gyanxet.com | Indian Association for the Cultivation of Science (IACS) | Kolkata | West Bengal | IACS | Functional | Database | NA |
| 1301 | ProNormz | An integrated approach for human proteins and protein kinases normalization | http://www.biominingbu.org/pronormz/ | Journal of biomedical informatics | Protein Structure | Protein | 2014 | 24144801 | Jeyakumar Natarajan | n.jeyakumar@yahoo.co.in | Bharathiar University | Coimbatore | Tamil Nadu | Other | Functional | Prediction | NA |
| 1308 | PPS | A computing engine to find Palindromes in all Protein sequences | http://pranag.physics.iisc.ernet.in/pps/ | Bioinformation | Protein Function | Protein | 2014 | 24516327 | K Sekar | sekar@physics.iisc.ernet.in | Indian Institute of Science (IISc) | Bangalore | Karnataka | IISc | Functional | Prediction | bio.tools |
| 1327 | OncomiRdbB | A comprehensive database of microRNAs and their targets in breast cancer | http://tdb.ccmb.res.in/OncomiRdbB/index.htm | BMC Bioinformatics | Genomics Vaccinomics | RNA | 2014 | 24428888 | Lekha Dinesh Kumar | lekha@ccmb.res.in | CSIR - Centre for Cellular and Molecular Biology (CSIR-CCMB) | Hyderabad | Telangana | CSIR | Functional | Database | NA |
| 1335 | HprotDB | The Halophile protein database | http://webapp.cabgrid.res.in/protein/ | Database: The Journal of Biological Databases and Curation | Protein Structure | Protein | 2014 | 25468930 | Mahammad Samir Farooqi | samir@iasri.res.in | ICAR - Indian Agricultural Statistics Research Institute (IASRI) | New Delhi | New Delhi | ICAR | Functional | Database | NA |
| 1337 | LeishMicrosatDB | Open source database of repeat sequences detected in six fully sequenced Leishmania genomes | http://biomedinformri.com/leishmicrosat | Database: The Journal of Biological Databases and Curation | Genomics | DNA | 2014 | 25125444 | Manas R Dikhit | manasranjandikhit@gmail.com | ICMR - Rajendra Memorial Research Institute of Medical Sciences (RMRIMS) | Patna | Bihar | ICMR | Functional | Database | NA |
| 1352 | AVPdb | A database of experimentally validated antiviral peptides targeting medically important viruses | http://crdd.osdd.net/servers/avpdb | Nucleic Acids Research | BioDrug | Protein | 2014 | 24285301 | Manoj Kumar | manojk@imtech.res.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | bio.tools |
| 1353 | VIRmiRNA | Comprehensive resource for experimentally validated viral miRNAs and their targets | http://crdd.osdd.net/servers/virmirna | Database: The Journal of Biological Databases and Curation | Genomics | RNA | 2014 | 25380780 | Manoj Kumar | manojk@imtech.res.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
| 1371 | GAP | Towards almost 100 percent prediction for β-strand-mediated aggregating peptides with distinct morphologies | http://www.iitm.ac.in/bioinfo/GAP/ | Bioinformatics | BioDrug | Protein | 2014 | 24681906 | Michael Gromiha | gromiha@iitm.ac.in | Indian Institute of Technology (IIT M) | Chennai | Tamil Nadu | IIT | Functional | Prediction | bio.tools |
| 1375 | PPA-Pred | Protein–protein binding affinity prediction from amino acid sequence | https://www.iitm.ac.in/bioinfo/PPA_Pred/ | Bioinformatics | Interactome | Protein | 2014 | 25172924 | Michael Gromiha | gromiha@iitm.ac.in | Indian Institute of Technology (IIT M) | Chennai | Tamil Nadu | IIT | Functional | Prediction | bio.tools |
| 1377 | Protein-RNA | Prediction of RNA Binding Residues: An Extensive Analysis Based on Structure and Function to Select the Best Predictor | https://www.iitm.ac.in/bioinfo/RNA-protein/ | PLOS One | Protein Function | Protein | 2014 | 24658593 | Michael Gromiha | gromiha@iitm.ac.in | Indian Institute of Technology (IIT M) | Chennai | Tamil Nadu | IIT | Functional | Prediction | NA |
| 1379 | LRRsearch | An asynchronous server-based application for the prediction of leucine-rich repeat motifs and an integrative database of NOD-like receptors | http://www.lrrsearch.com/ | Computers in biology and medicine | Protein Structure | Other | 2014 | 25150822 | Mrinal Samanta | msamanta1969@yahoo.com | ICAR - Central Institute of Freshwater Aquaculture (CIFA) | Bhubaneswar | Odisha | ICAR | Functional | Database | NA |
| 1386 | CLAP | A webserver for automatic classification of proteins with special reference to multi:domain proteins | http://nslab.mbu.iisc.ernet.in/clap/ | BMC Bioinformatics | Protein Structure | Protein | 2014 | 25282152 | N Srinivasan | ns@mbu.iisc.ernet.in | Indian Institute of Science (IISc) | Bangalore | Karnataka | IISc | Functional | Prediction | bio.tools |
| 1388 | PLIC | Protein-ligand interaction clusters | http://proline.biochem.iisc.ernet.in/PLIC | Database: The Journal of Biological Databases and Curation | Interactome | Protein | 2014 | 24763918 | Nagasuma Chandra | nchandra@biochem.iisc.ernet.in | Indian Institute of Science (IISc) | Bangalore | Karnataka | IISc | Functional | Database | NA |
| 1389 | ABS-Scan | In silico alanine scanning mutagenesis for binding site residues in protein:ligand complex | http://proline.biochem.iisc.ernet.in/abscan/ | F1000 research | Protein Function | Protein | 2014 | 25685322 | Nagasuma Chandra | nchandra@biochem.iisc.ernet.in | Indian Institute of Science (IISc) | Bangalore | Karnataka | IISc | Functional | Prediction | bio.tools |
| 1413 | FuzzyApp | A fuzzy logic based allergen-protein predictor | http://fuzzyapp.bicpu.edu.in/predict.php | Omics | Vaccinomics | Protein | 2014 | 25025745 | PTV Lakshmi | lakanna@bicpu.edu.in | Pondicherry University | Pondicherry | Pondicherry | Other | Functional | Prediction | BTISNet |
| 1416 | CicArMiSatDB | The chickpea microsatellite database | http://cicarmisatdb.icrisat.org | BMC Bioinformatics | Genomics | DNA | 2014 | 24952649 | Rajeev K Varshney | r.k.varshney@cgiar.org | International Crops Research Institute for the Semi-Arid Tropics (ICRISAT) | Hyderabad | Telangana | Other | Functional | Database | NA |
| 1418 | SMMRNA | A database of small molecule modulators of RNA | http://www.smmrna.org | Nucleic Acids Research | Genomics | RNA | 2014 | 24163098 | Raman Parkesh | rparkesh@imtech.res.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | bio.tools |
| 1423 | LenVarDB | Database of length-variant protein domains | http://caps.ncbs.res.in/lenvardb | Nucleic Acids Research | Protein Structure | Protein | 2014 | 24194591 | Ramanathan Sowdhamini | mini@ncbs.res.in | National Center for Biological Sciences (NCBS) | Bangalore | Karnataka | NCBS | Functional | Database | NA |
| 1424 | 3PFDB | Search protocol and update for the identification of representatives of protein sequence domain families | http://caps.ncbs.res.in/3pfdbplus/ | Database: The Journal of Biological Databases and Curation | Protein Structure | Protein | 2014 | 24700812 | Ramanathan Sowdhamini | mini@ncbs.res.in | National Center for Biological Sciences (NCBS) | Bangalore | Karnataka | NCBS | Functional | Database | NA |
| 1425 | DOR | A database of Olfactory Receptors - Integrated Repository for Sequence and Secondary Structural Information of Olfactory Receptors in Selected Eukaryotic Genomes | http://caps.ncbs.res.in/DOR | Bioinformatics and biology insights | Genomics | Other | 2014 | 25002814 | Ramanathan Sowdhamini | mini@ncbs.res.in | National Center for Biological Sciences (NCBS) | Bangalore | Karnataka | NCBS | Functional | Database | NA |
| 1426 | POEAS | Automated Plant Phenomic Analysis Using Plant Ontology | http://caps.ncbs.res.in/poeas/ | Bioinformatics and biology insights | Genomics | Other | 2014 | 25574136 | Ramanathan Sowdhamini | mini@ncbs.res.in | National Center for Biological Sciences (NCBS) | Bangalore | Karnataka | NCBS | Functional | Prediction | NA |
| 1459 | SVM-PB-Pred | SVM based protein block prediction method using sequence profiles and secondary structures | http://bioinfo.bdu.ac.in/~svmpbpred | Protein and peptide letters | Protein Structure | Protein | 2014 | 23855661 | S Parthasarathy | bdupartha@gmail.com | Bharathidasan University | Tiruchirappalli | Tamil Nadu | Other | Functional | Prediction | NA |
| 1479 | GraProStar | Ranking the quality of protein structure models using sidechain based network properties | http://vishgraph.mbu.iisc.ernet.in/GraProStr/native_non_native_ranking.html | F1000 research | Protein Structure | Protein | 2014 | 25580218 | Saraswathi Vishveshwara | sv@mbu.iisc.ernet.in | Indian Institute of Science (IISc) | Bangalore | Karnataka | IISc | Functional | Prediction | NA |
| 1482 | MCDRP | Manually curated database of rice proteins | http://www.genomeindia.org/biocuration | Nucleic Acids Research | Protein Structure | Protein | 2014 | 24214963 | Saurabh Raghuvanshi | saurabh@genomeindia.org | University of Delhi (DU) South Campus | New Delhi | New Delhi | DU | Functional | Database | NA |
| 1501 | MycobacRV | An immunoinformatics database of known and predicted mycobacterial vaccine candidates | http://mycobacteriarv.igib.res.in | Systems and synthetic biology | Vaccinomics | Other | 2014 | 24592289 | Srinivasan Ramachandran | ramuigib@gmail.com | CSIR - Institute of Genomics and Integrative Biology (CSIR-IGIB) | New Delhi | New Delhi | CSIR | Functional | Database | NA |
| 1505 | FunPred-1 | Protein function prediction from a protein interaction network using neighborhood analysis | http://code.google.com/p/cmaterbioinfo/ | Cellular and molecular biology letters | Protein Function Interactome | Protein | 2014 | 25424913 | Subhadip Basu | subhadip@cse.jdvu.ac.in | Jadavpur University | Kolkata | West Bengal | Other | Functional | Prediction | NA |
| 1526 | DR-GAS | DNA Repair database of genetic association studies for human DNA repair systems | http://bioinfoindia.org/drgas/ | DNA Repair | Genomics | DNA | 2014 | 24548788 | Tiratha Raj Singh | tiratharaj@gmail.com | Jaypee University of Information Technology (JUIT) | Solan | Himachal Pradesh | JUIT | Functional | Database | NA |
| 1530 | NMDB: Network Motifs Database | NETWORK MOTIF DATABASE ENVISAGED AND EXPLICATED FROM HUMAN DISEASE SPECIFIC PATHWAYS | http://bioinfoindia.org/nmdb/ | Journal of Biological Systems | Interactome | Other | 2014 | NA | Tiratha Raj Singh | tiratharaj@gmail.com | Jaypee University of Information Technology (JUIT) | Solan | Himachal Pradesh | JUIT | Functional | Database | NA |