Browse result page of IndioBioDb
The total number entries retrieved from this search are 26
ID1058 | Resource NamePeptideMine | Resource DescriptionA webserver for the design of peptides for protein:peptide binding studies derived from protein:protein interactomes | Resource Linkhttp://caps.ncbs.res.in/peptidemine/ | JournalBMC Bioinformatics | ClassBioDrug | SourceProtein | Year of Publication2010 | PMID 20858292 | Corresponding AuthorBalasubramanian Gopal Ramanathan Sowdhamini | Emailbgopal@mbu.iisc.ernet.in mini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1419 | Resource NameECMIS | Resource Descriptioncomputational approach for the identification of hotspots at protein:protein interfaces | Resource Linkhttp://caps.ncbs.res.in/download/ECMIS/ECMIS.zip | JournalBMC Bioinformatics | ClassProtein Function | SourceProtein | Year of Publication2016 | PMID 25228146 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1420 | Resource NamePIMADb | Resource DescriptionDatabase of Protein-Protein Interactions in Huge Macromolecular Assemblies | Resource Linkhttp://caps.ncbs.res.in/pimadb | JournalBioinformatics and biology insights | ClassInteractome | SourceProtein | Year of Publication2016 | PMID 27478368 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1421 | Resource NameRStrucFam | Resource DescriptionTo predict the structure, type of cognate RNA(s) and function(s) of proteins, where possible, from mere sequence information | Resource Linkhttp://caps.ncbs.res.in/rstrucfam | JournalBMC Bioinformatics | ClassProtein Function | SourceRNA | Year of Publication2016 | PMID 27717309 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1422 | Resource NameDOCKSCORE | Resource DescriptionA webserver for ranking protein-protein docked poses | Resource Linkhttp://caps.ncbs.res.in/dockscore/ | JournalBMC Bioinformatics | ClassProtein Structure Protein Function | SourceProtein | Year of Publication2015 | PMID 25902779 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1423 | Resource NameLenVarDB | Resource DescriptionDatabase of length-variant protein domains | Resource Linkhttp://caps.ncbs.res.in/lenvardb | JournalNucleic Acids Research | ClassProtein Structure | SourceProtein | Year of Publication2014 | PMID 24194591 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1424 | Resource Name3PFDB | Resource DescriptionSearch protocol and update for the identification of representatives of protein sequence domain families | Resource Linkhttp://caps.ncbs.res.in/3pfdbplus/ | JournalDatabase: The Journal of Biological Databases and Curation | ClassProtein Structure | SourceProtein | Year of Publication2014 | PMID 24700812 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1425 | Resource NameDOR | Resource DescriptionA database of Olfactory Receptors - Integrated Repository for Sequence and Secondary Structural Information of Olfactory Receptors in Selected Eukaryotic Genomes | Resource Linkhttp://caps.ncbs.res.in/DOR | JournalBioinformatics and biology insights | ClassGenomics | SourceOther | Year of Publication2014 | PMID 25002814 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1426 | Resource NamePOEAS | Resource DescriptionAutomated Plant Phenomic Analysis Using Plant Ontology | Resource Linkhttp://caps.ncbs.res.in/poeas/ | JournalBioinformatics and biology insights | ClassGenomics | SourceOther | Year of Publication2014 | PMID 25574136 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1427 | Resource NameSTIFDB2 | Resource DescriptionAn updated version of plant stress-responsive transcription factor database with additional stress signals, stress-responsive transcription factor binding sites and stress-responsive genes in Arabidopsis and rice | Resource Linkhttp://caps.ncbs.res.in/stifdb2 | JournalPlant and cell physiology | ClassGenomics | SourceDNA | Year of Publication2013 | PMID 23314754 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1428 | Resource NamePASS2 | Resource DescriptionAn update to the database of structure-based sequence alignments of structural domain superfamilies | Resource Linkhttp://caps.ncbs.res.in/pass2/ | JournalNucleic Acids Research | ClassProtein Structure | SourceDNA | Year of Publication2012 | PMID 22123743 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryDatabase | Other Repositorybio.tools, Bioinformatics Software and Tools |
ID1429 | Resource NameCOILCHECK+ | Resource DescriptionStructural attributes for the recognition of weak and anomalous regions in coiled:coils of myosins and other motor proteins | Resource Linkhttp://caps.ncbs.res.in/coilcheckplus/ | JournalBMC Research Notes | ClassProtein Structure Protein Function | SourceProtein | Year of Publication2012 | PMID 23009691 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1430 | Resource NameMyosinome | Resource DescriptionA database of myosins from select eukaryotic genomes to facilitate analysis of sequence-structure-function relationships | Resource Linkhttp://caps.ncbs.res.in/myosinome | JournalBioinformatics and biology insights | ClassProtein Structure Protein Function Genomics | SourceDNA | Year of Publication2012 | PMID 23189029 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1431 | Resource Name3dswap-pred | Resource DescriptionPrediction of 3D domain swapping from protein sequence using Random Forest approach. | Resource Linkhttp://caps.ncbs.res.in/3dswap-pred/ | JournalProtein and peptide letters | ClassProtein Structure | SourceProtein | Year of Publication2011 | PMID 21592079 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1432 | Resource NameHORI | Resource DescriptionA web server to compute Higher Order Residue Interactions in protein structures | Resource Linkhttp://caps.ncbs.res.in/hori/ | JournalBMC Bioinformatics | ClassProtein Structure | SourceProtein | Year of Publication2010 | PMID 20122196 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1433 | Resource Name3PFDB | Resource DescriptionA database of best representative PSSM profiles (BRPs) of protein families generated using a novel data mining approach | Resource Linkhttp://caps.ncbs.res.in/3pfdb | JournalBiodata Mining | ClassProtein Function | SourceProtein | Year of Publication2009 | PMID 19961575 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1434 | Resource NameCOILCHECK | Resource Descriptionan interactive server for the analysis of interface regions in coiled coils | Resource Linkhttp://caps.ncbs.res.in/coilcheck/ | JournalProtein and peptide letters | ClassProtein Function | SourceOther | Year of Publication2008 | PMID 18221010 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1435 | Resource NameSTIF | Resource DescriptionIdentification of stress-upregulated transcription factor binding sites in Arabidopsis thaliana | Resource Linkhttp://caps.ncbs.res.in/download/stif | JournalBioinformation | ClassGenomics | SourceOther | Year of Publication2008 | PMID 18841238 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1436 | Resource NameIWS | Resource Descriptionintegrated web server for protein sequence and structure analysis | Resource Linkhttp://caps.ncbs.res.in/iws | JournalBioinformation | ClassProtein Function | SourceProtein | Year of Publication2007 | PMID 18288329 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1437 | Resource NameHARMONY | Resource DescriptionA server for the assessment of protein structures | Resource Linkhttp://caps.ncbs.res.in/harmony/ | JournalNucleic Acids Research | ClassProtein Structure | SourceProtein | Year of Publication2006 | PMID 16844999 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryPrediction | Other Repositorybio.tools |
ID1438 | Resource NameDIAL | Resource DescriptionA webbased server for the automatic identification of structural domains in proteins | Resource Linkhttp://caps.ncbs.res.in/DIAL/home.html | JournalNucleic Acids Research | ClassProtein Structure | SourceProtein | Year of Publication2005 | PMID 15980441 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1439 | Resource NameDSDBASE | Resource DescriptionA consortium of native and modelled disulphide bonds in proteins | Resource Linkhttp://www.ncbs.res.in/ | JournalNucleic Acids Research | ClassProtein Structure | SourceProtein | Year of Publication2004 | PMID 14681394 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryBioinformatics Software and Tools |
ID1440 | Resource NameFMALIGN | Resource DescriptionImprovement of alignment accuracy utilizing sequentially conserved motifs | Resource Linkhttp://caps.ncbs.res.in/FMALIGN/Home.html | JournalBMC Bioinformatics | ClassGenomics | SourceOther | Year of Publication2004 | PMID 15509307 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1441 | Resource NamePPCheck | Resource DescriptionA webserver for identification of non-covalent interactions at the interface of a protein-protein complex | Resource Linkhttp://caps.ncbs.res.in/ppcheck/ | JournalBioinformatics and biology insights | ClassProtein Function | SourceProtein | Year of Publication2015 | PMID 26448684 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryPrediction | Other Repositorybio.tools |
ID1442 | Resource NameEcRBPome | Resource DescriptionA Comprehensive Database of All Known E. Coli RNA-binding Proteins | Resource Linkhttp://caps.ncbs.res.in/ecrbpome/ | JournalBMC Bioinformatics | ClassProtein Function | SourceRNA | Year of Publication2019 | PMID 31117939 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryDatabase | Other Repositorybio.tools |
ID1443 | Resource NameGenDiS | Resource DescriptionDatabase Update With Improved Approach and Features to Recognize Homologous Sequences of Protein Domain Superfamilies | Resource Linkhttp://caps.ncbs.res.in/cgi-bin/gendis+/index.py | JournalDatabase: The Journal of Biological Databases and Curation | ClassProtein Structure | SourceProtein | Year of Publication2019 | PMID 30943284 | Corresponding AuthorRamanathan Sowdhamini | Emailmini@ncbs.res.in | InstituteNational Center for Biological Sciences (NCBS) | CityBangalore | StateKarnataka | Functional StatusNCBS | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |