• 011-26907444
  • raghava@iiitd.ac.in

Browse result page of IndioBioDb

The total number entries retrieved from this search are 26
ID1058Resource NamePeptideMineResource DescriptionA webserver for the design of peptides for protein:peptide binding studies derived from protein:protein interactomesResource Linkhttp://caps.ncbs.res.in/peptidemine/JournalBMC BioinformaticsClassBioDrugSourceProteinYear of Publication2010PMID 20858292Corresponding AuthorBalasubramanian Gopal Ramanathan SowdhaminiEmailbgopal@mbu.iisc.ernet.in mini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryPredictionOther RepositoryNA
ID1419Resource NameECMISResource Descriptioncomputational approach for the identification of hotspots at protein:protein interfacesResource Linkhttp://caps.ncbs.res.in/download/ECMIS/ECMIS.zipJournalBMC BioinformaticsClassProtein FunctionSourceProteinYear of Publication2016PMID 25228146Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryPredictionOther RepositoryNA
ID1420Resource NamePIMADbResource DescriptionDatabase of Protein-Protein Interactions in Huge Macromolecular AssembliesResource Linkhttp://caps.ncbs.res.in/pimadbJournalBioinformatics and biology insightsClassInteractomeSourceProteinYear of Publication2016PMID 27478368Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryDatabaseOther RepositoryNA
ID1421Resource NameRStrucFamResource DescriptionTo predict the structure, type of cognate RNA(s) and function(s) of proteins, where possible, from mere sequence informationResource Linkhttp://caps.ncbs.res.in/rstrucfamJournalBMC BioinformaticsClassProtein FunctionSourceRNAYear of Publication2016PMID 27717309Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryDatabaseOther RepositoryNA
ID1422Resource NameDOCKSCOREResource DescriptionA webserver for ranking protein-protein docked posesResource Linkhttp://caps.ncbs.res.in/dockscore/JournalBMC BioinformaticsClassProtein Structure Protein FunctionSourceProteinYear of Publication2015PMID 25902779Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.resInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryPredictionOther RepositoryNA
ID1423Resource NameLenVarDBResource DescriptionDatabase of length-variant protein domainsResource Linkhttp://caps.ncbs.res.in/lenvardbJournalNucleic Acids ResearchClassProtein StructureSourceProteinYear of Publication2014PMID 24194591Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryDatabaseOther RepositoryNA
ID1424Resource Name3PFDBResource DescriptionSearch protocol and update for the identification of representatives of protein sequence domain familiesResource Linkhttp://caps.ncbs.res.in/3pfdbplus/JournalDatabase: The Journal of Biological Databases and CurationClassProtein StructureSourceProteinYear of Publication2014PMID 24700812Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryDatabaseOther RepositoryNA
ID1425Resource NameDORResource DescriptionA database of Olfactory Receptors - Integrated Repository for Sequence and Secondary Structural Information of Olfactory Receptors in Selected Eukaryotic GenomesResource Linkhttp://caps.ncbs.res.in/DORJournalBioinformatics and biology insightsClassGenomicsSourceOtherYear of Publication2014PMID 25002814Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryDatabaseOther RepositoryNA
ID1426Resource NamePOEASResource DescriptionAutomated Plant Phenomic Analysis Using Plant OntologyResource Linkhttp://caps.ncbs.res.in/poeas/JournalBioinformatics and biology insightsClassGenomicsSourceOtherYear of Publication2014PMID 25574136Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryPredictionOther RepositoryNA
ID1427Resource NameSTIFDB2Resource DescriptionAn updated version of plant stress-responsive transcription factor database with additional stress signals, stress-responsive transcription factor binding sites and stress-responsive genes in Arabidopsis and riceResource Linkhttp://caps.ncbs.res.in/stifdb2JournalPlant and cell physiologyClassGenomicsSourceDNAYear of Publication2013PMID 23314754Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryDatabaseOther RepositoryNA
ID1428Resource NamePASS2Resource DescriptionAn update to the database of structure-based sequence alignments of structural domain superfamiliesResource Linkhttp://caps.ncbs.res.in/pass2/JournalNucleic Acids ResearchClassProtein StructureSourceDNAYear of Publication2012PMID 22123743Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryDatabaseOther Repositorybio.tools, Bioinformatics Software and Tools
ID1429Resource NameCOILCHECK+Resource DescriptionStructural attributes for the recognition of weak and anomalous regions in coiled:coils of myosins and other motor proteinsResource Linkhttp://caps.ncbs.res.in/coilcheckplus/JournalBMC Research NotesClassProtein Structure Protein FunctionSourceProteinYear of Publication2012PMID 23009691Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryPredictionOther RepositoryNA
ID1430Resource NameMyosinomeResource DescriptionA database of myosins from select eukaryotic genomes to facilitate analysis of sequence-structure-function relationshipsResource Linkhttp://caps.ncbs.res.in/myosinomeJournalBioinformatics and biology insightsClassProtein Structure Protein Function GenomicsSourceDNAYear of Publication2012PMID 23189029Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryDatabaseOther RepositoryNA
ID1431Resource Name3dswap-predResource DescriptionPrediction of 3D domain swapping from protein sequence using Random Forest approach.Resource Linkhttp://caps.ncbs.res.in/3dswap-pred/JournalProtein and peptide lettersClassProtein StructureSourceProteinYear of Publication2011PMID 21592079Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryPredictionOther RepositoryNA
ID1432Resource NameHORIResource DescriptionA web server to compute Higher Order Residue Interactions in protein structuresResource Linkhttp://caps.ncbs.res.in/hori/JournalBMC BioinformaticsClassProtein StructureSourceProteinYear of Publication2010PMID 20122196Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryPredictionOther RepositoryNA
ID1433Resource Name3PFDBResource DescriptionA database of best representative PSSM profiles (BRPs) of protein families generated using a novel data mining approachResource Linkhttp://caps.ncbs.res.in/3pfdbJournalBiodata MiningClassProtein FunctionSourceProteinYear of Publication2009PMID 19961575Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryDatabaseOther RepositoryNA
ID1434Resource NameCOILCHECKResource Descriptionan interactive server for the analysis of interface regions in coiled coilsResource Linkhttp://caps.ncbs.res.in/coilcheck/JournalProtein and peptide lettersClassProtein FunctionSourceOtherYear of Publication2008PMID 18221010Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryPredictionOther RepositoryNA
ID1435Resource NameSTIFResource DescriptionIdentification of stress-upregulated transcription factor binding sites in Arabidopsis thalianaResource Linkhttp://caps.ncbs.res.in/download/stifJournalBioinformationClassGenomicsSourceOtherYear of Publication2008PMID 18841238Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryPredictionOther RepositoryNA
ID1436Resource NameIWSResource Descriptionintegrated web server for protein sequence and structure analysisResource Linkhttp://caps.ncbs.res.in/iwsJournalBioinformationClassProtein FunctionSourceProteinYear of Publication2007PMID 18288329Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryPredictionOther RepositoryNA
ID1437Resource NameHARMONYResource DescriptionA server for the assessment of protein structuresResource Linkhttp://caps.ncbs.res.in/harmony/JournalNucleic Acids ResearchClassProtein StructureSourceProteinYear of Publication2006PMID 16844999Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryPredictionOther Repositorybio.tools
ID1438Resource NameDIALResource DescriptionA webbased server for the automatic identification of structural domains in proteinsResource Linkhttp://caps.ncbs.res.in/DIAL/home.htmlJournalNucleic Acids ResearchClassProtein StructureSourceProteinYear of Publication2005PMID 15980441Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryPredictionOther RepositoryNA
ID1439Resource NameDSDBASEResource DescriptionA consortium of native and modelled disulphide bonds in proteinsResource Linkhttp://www.ncbs.res.in/JournalNucleic Acids ResearchClassProtein StructureSourceProteinYear of Publication2004PMID 14681394Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryDatabaseOther RepositoryBioinformatics Software and Tools
ID1440Resource NameFMALIGNResource DescriptionImprovement of alignment accuracy utilizing sequentially conserved motifsResource Linkhttp://caps.ncbs.res.in/FMALIGN/Home.htmlJournalBMC BioinformaticsClassGenomicsSourceOtherYear of Publication2004PMID 15509307Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryPredictionOther RepositoryNA
ID1441Resource NamePPCheckResource DescriptionA webserver for identification of non-covalent interactions at the interface of a protein-protein complexResource Linkhttp://caps.ncbs.res.in/ppcheck/JournalBioinformatics and biology insightsClassProtein FunctionSourceProteinYear of Publication2015PMID 26448684Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryPredictionOther Repositorybio.tools
ID1442Resource NameEcRBPomeResource DescriptionA Comprehensive Database of All Known E. Coli RNA-binding ProteinsResource Linkhttp://caps.ncbs.res.in/ecrbpome/JournalBMC BioinformaticsClassProtein FunctionSourceRNAYear of Publication2019PMID 31117939Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryDatabaseOther Repositorybio.tools
ID1443Resource NameGenDiS Resource DescriptionDatabase Update With Improved Approach and Features to Recognize Homologous Sequences of Protein Domain SuperfamiliesResource Linkhttp://caps.ncbs.res.in/cgi-bin/gendis+/index.pyJournalDatabase: The Journal of Biological Databases and CurationClassProtein StructureSourceProteinYear of Publication2019PMID 30943284Corresponding AuthorRamanathan SowdhaminiEmailmini@ncbs.res.inInstituteNational Center for Biological Sciences (NCBS)CityBangaloreStateKarnatakaFunctional StatusNCBSFunding AgencyFunctionalResource categoryDatabaseOther RepositoryNA