Browse result page of IndioBioDb
The total number entries retrieved from this search are 14
ID | Resource Name | Resource Description | Resource Link | Journal | Class | Source | Year of Publication | PMID | Corresponding Author | Institute | City | State | Functional Status | Funding Agency | Resource category | Other Repository | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1045 | PvaxDB | Helpful in identifying novel protein drug targets, expediting development of new drugs to combat malaria | http://www.scfbio-iitd.res.in/PvaxDB/ | Database: The Journal of Biological Databases and Curation | Cheminformatics | Protein | 2018 | 29688373 | B Jayaram | bjayaram@chemistry.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Database | NA |
1046 | Intercalate | A DNA intercalation methodology for an efficient prediction of ligand binding pose and energetics | http://www.scfbio-iitd.res.in/intercalate/ | Bioinformatics | Protein Function Cheminformatics | DNA | 2017 | 28073762 | B Jayaram | bjayaram@chemistry.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Prediction | NA |
1047 | ProTSAV | A protein tertiary structure analysis and validation server | http://www.scfbio-iitd.res.in/software/proteomics/protsav.jsp | Bioichimica et biophysics acta | Protein Structure | Protein | 2016 | 26478257 | B Jayaram | bjayaram@chemistry.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Prediction | BTISNet |
1048 | RM2TS | Web server to convert a tertiary structure to an alphanumeric string and to predict the tertiary structure from the sequence of a protein | http://www.scfbio-iitd.res.in/software/proteomics/rm2ts.jsp | The journal of physical chemsitry | Protein Structure | Protein | 2015 | 26098815 | B Jayaram | bjayaram@chemistry.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Prediction | BTISNet |
1049 | D2N | New avenue towards assigning reliable structures to whole proteomes even in the absence of experimentally determined native structures | http://www.scfbio-iitd.res.in/software/d2n.jsp | Bioichimica et biophysics acta | Protein Structure | Protein | 2014 | 25062912 | B Jayaram | bjayaram@chemistry.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Prediction | NA |
1050 | pcSM | Capturing native/native like structures with a physico-chemical metric (pcSM) in protein folding | http://www.scfbio-iitd.res.in/software/pcsm.jsp | Bioichimica et biophysics acta | Protein Structure Protein Function | Protein | 2013 | 23665455 | B Jayaram | bjayaram@chemistry.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Prediction | NA |
1051 | ALGORITHM | A homology/ab initio hybrid algorithm for sampling near-native protein conformations | http://www.scfbio-iitd.res.in/software/Bhageerath-HStrgen1.jsp | Journal of Computational Chemistry | Protein Structure | Protein | 2013 | 23728619 | B Jayaram | bjayaram@chemistry.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Prediction | NA |
1052 | Sanjeevini | A freely accessible webserver for target directed lead molecule discovery | http://www.scfbio-iitd.res.in/sanjeevini/sanjeevini.jsp | BMC Bioinformatics | Cheminformatics | Other | 2012 | 23282245 | B Jayaram | bjayaram@chemistry.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Prediction | NA |
1053 | TPACM4 | A fast empirical GAFF compatible partial atomic charge assignment scheme for modeling interactions of small molecules with biomolecular targets | http://www.scfbio-iitd.res.in/software/drugdesign/charge.jsp | Journal of Computational Chemistry | Genomics | Other | 2011 | 21341292 | B Jayaram | bjayaram@chemistry.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Prediction | NA |
1054 | AADS | An automated active site identification, docking, and scoring protocol for protein targets based on physicochemical descriptors | http://www.scfbio-iitd.res.in/dock/ActiveSite_new.jsp | Journal of chemical information and modeling | Protein Structure Protein Function Cheminformatics | Protein | 2011 | 21877713 | B Jayaram | bjayaram@chemistry.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Prediction | NA |
1055 | ProRegln | A regularity index for the selection of native-like tertiary structures of proteins | www.scfbio-iitd.res.in/software/proregin.jsp | Journal of biosciences | Protein Structure | Protein | 2007 | 17426381 | B Jayaram | bjayaram@chemistry.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Prediction | NA |
1056 | Bhageerath | An energy based web enabled computer software suite for limiting the search space of tertiary structures of small globular proteins | http://www.scfbio-iitd.res.in/bhageerath/index.jsp | Nucleic Acids Research | Protein Structure | Protein | 2006 | 17090600 | B Jayaram | bjayaram@chemistry.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Prediction | BTISNet |
1057 | SEProm | A method for predicting prokaryotic promoter based on DNA structure and energetics | http://www.scfbio-iitd.res.in/PvaxDB/ | Bioinformatics | Genomics | Other | 2020 | 31909789 | B Jayaram | bjayaram@chemistry.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Prediction | NA |
1395 | Onco-Regulon | An integrated database of regulatory motifs of cancer genes clubbed with Unique Sequence-Predictor (USP) a software suite that identifies unique sequences for each of these regulatory DNA motifs at the specified position in the genome | http://www.scfbio-iitd.res.in/software/onco/NavSite/index.htm | Database: The Journal of Biological Databases and Curation | Genomics | DNA | 2016 | 27515825 | Nirotpal Mrinal B Jayaram | nmrinal@gmail.com bjayaram@chemistry.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Database | NA |