Browse result page of IndioBioDb
The total number entries retrieved from this search are 81
ID | Resource Name | Resource Description | Resource Link | Journal | Class | Source | Year of Publication | PMID | Corresponding Author | Institute | City | State | Functional Status | Funding Agency | Resource category | Other Repository | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1026 | HPVdetector | NGS-based approach to determine the presence of HPV and their sites of integration in human cancer genome | http://www.actrec.gov.in/pi-webpages/AmitDutt/HPVdetector/HPVDetector.html | British journal of cancer | Vaccinomics Interactome Genomics | DNA | 2015 | 25973533 | Amit Dutt | adutt@actrec.gov.in | Advanced Centre for Treatment Research and Education in Cancer (ACTREC) Tata Memorial Centre | Mumbai | Maharashtra | ACTREC | Functional | Prediction | NA |
1040 | dbGAPs | Contains annotation for 202 manually curated genes associated with psoriasis and its subtypes with cross-references | http://www.bmicnip.in/dbgaps/ | Genomics | Genomics Vaccinomics | DNA | 2017 | 29031638 | Arun Kumar Jain | akjain@instpath.gov.in | ICMR - National Institute of Pathology (NIP) | New Delhi | New Delhi | ICMR | Functional | Database | NA |
1059 | ImmtorLig_DB | Repertoire of virtually screened small molecules against immune receptors to bolster host immunity | http://bioinfo.imtech.res.in/bvs/immtor/ | Scientific Reports | Cheminformatics Vaccinomics | Other | 2019 | 30816123 | Balvinder Singh Javed N Agrewala | bvs@imtech.res.in jagrewala@iitrpr.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) Indian Institute of Technology Ropar (IIT RPR) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1067 | RAmiRNA | Software suite for generation of SVMbased prediction models of mature miRNAs | http://ircb.iiita.ac.in | Bioinformation | Genomics Vaccinomics | RNA | 2012 | 22829735 | CVS Siva Prasad | shiva@iiita.ac.in | Indian Institute of Information Technology (IIIT-A) | Allahabad | Uttar Pradesh | IIIT | Functional | Prediction | NA |
1079 | Jatropha Genome Database | Jatropha curcas hemagglutinin is similar to a 2S albumin allergen from the same source and has unique sugar affinities | http://www.kazusa.or.jp/jatropha/ | Planta | Vaccinomics | Other | 2012 | 22798079 | Desh Deepak Singh | ddsingh@iiar.res.in | Indian Institute of Advanced Research (IIAR) | Gandhinagar | Gujrat | IIAR | Functional | Database | NA |
1088 | FaaPred | A SVM-based prediction method for fungal adhesins and adhesin-like proteins | http://bioinfo.icgeb.res.in/faap | PLOS One | Vaccinomics BioDrug | Protein | 2010 | 20300572 | Dinesh Gupta | dinesh@icgeb.res.in | DBT - International Centre for Genetic Engineering and Biotechnology (ICGEB) | New Delhi | New Delhi | DBT | Functional | Prediction | BTISNet |
1091 | VirulentPred | A SVM based prediction method for virulent proteins in bacterial pathogens | http://bioinfo.icgeb.res.in/virulent/ | BMC Bioinformatics | Vaccinomics | Protein | 2008 | 18226234 | Dinesh Gupta | dinesh@icgeb.res.in | DBT - International Centre for Genetic Engineering and Biotechnology (ICGEB) | New Delhi | New Delhi | DBT | Functional | Prediction | NA |
1112 | VacTarBac | A Web Resource for Designing Subunit Vaccine Against Major Pathogenic Species of Bacteria | http://webs.iiitd.edu.in/raghava/vactarbac/ | Frontiers in Immunology | Vaccinomics BioDrug | Protein | 2019 | 30356876 | Gajendra PS Raghava | raghava@iiitd.ac.in | Indraprastha Institute of Information Technology (IIITD) | New Delhi | New Delhi | IIIT | Functional | Prediction | NA |
1115 | AntiMPmod | Prediction of Antimicrobial Potential of a Chemically Modified Peptide From Its Tertiary Structure | http://webs.iiitd.edu.in/raghava/antimpmod/ | Frontiers in Immunology | Vaccinomics Cheminformatics | Protein | 2019 | 30416494 | Gajendra PS Raghava | raghava@iiitd.ac.in | Indraprastha Institute of Information Technology (IIITD) | New Delhi | New Delhi | IIIT | Functional | Prediction | NA |
1118 | ImmunoSPdb | An archive of immunosuppressive peptides | http://webs.iiitd.edu.in/raghava/immunospdb/ | Database: The Journal of Biological Databases and Curation | Vaccinomics | Protein | 2019 | 30753476 | Gajendra PS Raghava | raghava@iiitd.ac.in | Indraprastha Institute of Information Technology (IIITD) | New Delhi | New Delhi | IIIT | Functional | Database | NA |
1129 | imrna | Computational Prediction of the Immunomodulatory Potential of RNA Sequences | http://webs.iiitd.edu.in/raghava/imrna/ | Methods in Molecular Biology | Vaccinomics | RNA | 2017 | 28730433 | Gajendra PS Raghava | raghava@iiitd.ac.in | Indraprastha Institute of Information Technology (IIITD) | New Delhi | New Delhi | IIIT | Functional | Prediction | BTISNet |
1130 | THPdb | Manually curated repository of Food and Drug Administration (FDA) approved therapeutic peptides and proteins | http://webs.iiitd.edu.in/raghava/thpdb/ | PLOS One | Vaccinomics BioDrug | Protein | 2017 | 28759605 | Gajendra PS Raghava | raghava@iiitd.ac.in | Indraprastha Institute of Information Technology (IIITD) | New Delhi | New Delhi | IIIT | Functional | Database | BTISNet |
1135 | imRNA | Prediction of Immunomodulatory potential of an RNA sequence for designing non-toxic siRNAs and RNA-based vaccine adjuvants | http://webs.iiitd.edu.in/raghava/imrna/ | Scientific Reports | Vaccinomics | RNA | 2016 | 26861761 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1139 | CancerDP | Prioritization of anticancer drugs against a cancer using genomic features of cancer cells | http://webs.iiitd.edu.in/raghava/cancerdp/ | Scientific Reports | Cheminformatics Vaccinomics | DNA | 2016 | 27030518 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | NA |
1140 | MtbVeb | Web-Based Platform for Designing Vaccines against Existing and Emerging Strains of Mycobacterium tuberculosis | http://webs.iiitd.edu.in/raghava/mtbveb/ | Methods in Molecular Biology | Vaccinomics | Protein | 2016 | 27096425 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | BTISNet |
1141 | EbolaVCR | A web-based resource for designing therapeutics against Ebola Virus | http://crdd.osdd.net/oscadd/ebola/ | Scientific Reports | Vaccinomics | Other | 2016 | 27113850 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1143 | ZikaVR | An integrated Zika virus resource for genomics,proteomics,phylogenetic and therapeutic analysis | http://bioinfo.imtech.res.in/manojk/zikavr/ | Scientific Reports | Vaccinomics | Other | 2016 | 27633273 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1153 | VaccineDA | Prediction, design and genome-wide screening of oligodeoxynucleotide-based vaccine adjuvants | http://webs.iiitd.edu.in/raghava/vaccineda/ | Scientific Reports | Vaccinomics | Other | 2015 | 26212482 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1158 | RNAcon | Prediction and classification of ncRNAs using structural information | http://webs.iiitd.edu.in/raghava/rnacon/ | BMC Genomics | Vaccinomics | RNA | 2014 | 24521294 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | NA |
1160 | HerceptinR | Information about assays performend to test sensitivity/resistance of Herceptin Antibodies | http://webs.iiitd.edu.in/raghava/herceptinr/ | Scientific Reports | Vaccinomics | Protein | 2014 | 24670875 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1161 | DiPCell | Designing of inhibitors against pancreatic cancer cell lines. | http://webs.iiitd.edu.in/raghava/dipcell/ | Scientific Reports | Cheminformatics Vaccinomics | Other | 2014 | 24728108 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1165 | tRNAmod | Prediction of uridine modifications in tRNA sequences | http://webs.iiitd.edu.in/raghava/trnamod/ | BMC Bioinformatics | Vaccinomics Interactome | RNA | 2014 | 25272949 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1171 | HIVcoPred | Hybrid approach for predicting coreceptor used by HIV-1 from its V3 loop amino acid sequence | http://webs.iiitd.edu.in/raghava/hivcopred/ | PLOS One | Protein Function Vaccinomics | Protein | 2013 | 23596523 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1172 | LBtope | Improved method for linear B-cell epitope prediction using antigen's primary sequence | http://webs.iiitd.edu.in/raghava/lbtope/ | PLOS One | Vaccinomics | Protein | 2013 | 23667458 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1174 | ToxinPred | In silico approach for predicting toxicity of peptides and proteins | http://webs.iiitd.edu.in/raghava/toxinpred/ | PLOS One | Protein Function Vaccinomics BioDrug | Protein | 2013 | 24058508 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1176 | IgPred | In silico models have been developed for predicting B-cell epitopes, which can induce specific class of antibodies | http://webs.iiitd.edu.in/raghava/igpred/ | Biology Direct | Vaccinomics | Protein | 2013 | 24168386 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1177 | DrugMint | A webserver for predicting and designing of drug-like molecules | http://webs.iiitd.edu.in/oscadd/drugmint/ | Biology Direct | Cheminformatics Vaccinomics | Other | 2013 | 24188205 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1178 | IFNepitope | Designing of interferon-gamma inducing MHC class-II binders | http://webs.iiitd.edu.in/raghava/ifnepitope/ | Biology Direct | Vaccinomics | Protein | 2013 | 24304645 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1179 | IL4pred | In silico platform for designing and disovering of Interleukin-4 inducing peptides | http://webs.iiitd.edu.in/raghava/il4pred/ | Clinical and developmental immunology | Vaccinomics | Protein | 2013 | 24489573 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1186 | CancerPred | Analysis and prediction of cancerlectins using evolutionary and domain information | http://webs.iiitd.edu.in/raghava/cancer_pred/ | BMC Research Notes | Vaccinomics | Other | 2011 | 21774797 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools, BTISNet |
1187 | desiRm | Designing of highly efficient siRNA with minimum mutation approach | http://webs.iiitd.edu.in/raghava/desirm/ | PLOS One | Vaccinomics | RNA | 2011 | 21853133 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | NA |
1189 | AntigenDB | An immunoinformatics database of pathogen antigens | http://webs.iiitd.edu.in/raghava/antigendb/ | Nucleic Acids Research | Vaccinomics | Protein | 2010 | 19820110 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | BTISNet |
1198 | CBTOPE | Identification of conformational B-cell Epitopes in an antigen from its primary sequence | http://webs.iiitd.edu.in/raghava/cbtope/ | Immunome research | Vaccinomics | Protein | 2010 | 20961417 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1201 | MHCBN4 | A database of MHC/TAP binding peptides and T-cell epitopes | http://webs.iiitd.edu.in/raghava/mhcbn/ | BMC Research Notes | Vaccinomics | Protein | 2009 | 19379493 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1204 | Hmrbase | A database of hormones and their receptors | http://webs.iiitd.edu.in/raghava/hmrbase/ | BMC Genomics | Vaccinomics | Other | 2009 | 19589147 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1205 | PolyApred | Prediction of polyadenylation signal (PAS) in human DNA sequence | http://webs.iiitd.edu.in/raghava/polyapred/ | In Silico biology | Vaccinomics | DNA | 2009 | 19795571 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1208 | CytoPred | Prediction and classification of cytokines | http://webs.iiitd.edu.in/raghava/cytopred/ | Protein engineering,design and selection | Vaccinomics | Protein | 2008 | 18287174 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1210 | PRRDB | A comprehensive database of pattern-recognition receptors and their ligands | http://webs.iiitd.edu.in/raghava/prrdb/index.html | BMC Genomics | Vaccinomics | Protein | 2008 | 18423032 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | BTISNet |
1216 | Nhlapred | A hybrid approach for predicting promiscuous MHC class I restricted T cell epitopes | http://webs.iiitd.edu.in/raghava/nhlapred/ | Journal of biosciences | Vaccinomics | Other | 2007 | 17426378 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools, BTISNet |
1224 | BTXpred | Prediction of bacterial toxins | http://webs.iiitd.edu.in/raghava/btxpred/ | In Silico biology | Vaccinomics | Other | 2007 | 18391233 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1225 | TAPPred | Prediction of TAP-binding peptides in antigens | http://webs.iiitd.edu.in/raghava/tappred/ | Methods in Molecular Biology | Vaccinomics | Protein | 2007 | 18450016 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools, BTISNet |
1226 | AntiBP2 | Mapping of antibacterial peptides in a protein sequence | http://webs.iiitd.edu.in/raghava/antibp2/ | BMC Bioinformatics | Vaccinomics | Protein | 2007 | 20122190 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1227 | AlgPred | Prediction of allergenic proteins and mapping of IgE epitopes | www.imtech.res.in/raghava/algpred/ | Nucleic Acids Research | Vaccinomics | Protein | 2006 | 16844994 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools, BTISNet |
1230 | ABCpred | Mapping of B-cell epitope(s) in an antigen sequence, using artificial neural network | http://webs.iiitd.edu.in/raghava/abcpred/ | Proteins | Vaccinomics | Other | 2006 | 16894596 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools, BTISNet |
1235 | BciPep | A database of B-cell epitopes | http://www.imtech.res.in/raghava/bcipep | BMC Genomics | Vaccinomics | Other | 2005 | 15921533 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | Bioinformatics Software and Tools, BTISNet |
1238 | Pcleavage | SVM based method for prediction of constitutive proteasome and immunoproteasome cleavage sites in antigenic sequences | http://webs.iiitd.edu.in/raghava/pcleavage/ | Nucleic Acids Research | Vaccinomics | Protein | 2005 | 15988831 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools, BTISNet |
1242 | HLA-DR4Pred | Identification of HLA-DRB1*0401(MHC class II alleles) binding peptides. | http://webs.iiitd.edu.in/raghava/hladr4pred/ | Bioinformatics | Vaccinomics | Protein | 2004 | 14960470 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1243 | SRF | A program to find repeats through an analysis of the power spectrum of a given DNA sequence. | http://webs.iiitd.edu.in/raghava/srf/ | Bioinformatics | Vaccinomics | DNA | 2004 | 14976032 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | NA |
1251 | CTLPred | A direct method for prediction of CTL epitopes | http://webs.iiitd.edu.in/raghava/ctlpred/ | Vaccine | Vaccinomics | Protein | 2004 | 15297074 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1253 | BCEpred | Prediction of linear B-cell epitopes, using Physico-chemical properties | http://webs.iiitd.edu.in/raghava/bcepred/ | Springer | Vaccinomics | Other | 2004 | https://doi.org/10.1007/978-3-540-30220-9_16 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools |