Browse result page of IndioBioDb
The total number entries retrieved from this search are 199
ID1001 | Resource NameTRABAS | Resource DescriptionA database for transcription regulation by ABA signaling | Resource Linkhttp://www.bioinformatics.org/trabas/ | JournalIn Silico biology | ClassGenomics | SourceDNA | Year of Publication2008 | PMID 19374134 | Corresponding AuthorA Choudhury | Emailananyo.c@gmail.com | InstituteUniversity of Calcutta | CityKolkata | StateWest Bengal | Functional StatusOther | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1006 | Resource NameMaLDoSS | Resource DescriptionPrediction of donor splice sites using random forest with a new sequence encoding approach | Resource Linkhttp://cabgrid.res.in:8080/maldoss | JournalBiodata Mining | ClassGenomics | SourceOther | Year of Publication2016 | PMID 26807151 | Corresponding AuthorA R Rao | Emailrao.cshl.work@gmail.com | InstituteICAR - Indian Agricultural Statistics Research Institute (IASRI) | CityNew Delhi | StateNew Delhi | Functional StatusICAR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1007 | Resource NameHSplice | Resource DescriptionIdentification of Donor Splice Sites Using Support Vector Machine: A Computational Approach Based on Positional, Compositional and Dependency Features | Resource Linkhttp://cabgrid.res.in:8080/HSplice | JournalAlgorithms for molecular biology: AMB | ClassGenomics | SourceOther | Year of Publication2016 | PMID 27252772 | Corresponding AuthorA R Rao | Emailrao.cshl.work@gmail.com | InstituteICAR - Indian Agricultural Statistics Research Institute (IASRI) | CityNew Delhi | StateNew Delhi | Functional StatusICAR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1008 | Resource NamePreDOSS | Resource DescriptionA computational approach for prediction of donor splice sites with improved accuracy | Resource Linkhttp://cabgrid.res.in:8080/predoss | JournalJournal of theoretical biology | ClassGenomics | SourceOther | Year of Publication2016 | PMID 27302911 | Corresponding AuthorA R Rao | Emailrao.cshl.work@gmail.com | InstituteICAR - Indian Agricultural Statistics Research Institute (IASRI) | CityNew Delhi | StateNew Delhi | Functional StatusICAR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1009 | Resource NameSPIDBAR | Resource DescriptionIdentification of species based on DNA barcode using k-mer feature vector and Random forest classifier | Resource Linkhttp://cabgrid.res.in:8080/spidbar/ | JournalGene | ClassGenomics | SourceDNA | Year of Publication2016 | PMID 27393648 | Corresponding AuthorA R Rao | Emailrao.cshl.work@gmail.com | InstituteICAR - Indian Agricultural Statistics Research Institute (IASRI) | CityNew Delhi | StateNew Delhi | Functional StatusICAR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1010 | Resource NamedSSpred | Resource DescriptionA statistical approach for 5' splice site prediction using short sequence motifs and without encoding sequence data | Resource Linkhttp://cabgrid.res.in:8080/sspred | JournalBMC Bioinformatics | ClassGenomics | SourceDNA | Year of Publication2014 | PMID 25420551 | Corresponding AuthorA R Rao | Emailrao.cshl.work@gmail.com | InstituteICAR - Indian Agricultural Statistics Research Institute (IASRI) | CityNew Delhi | StateNew Delhi | Functional StatusICAR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1012 | Resource NameCbLncRNAdb | Resource DescriptionComputationally identify lncRNAs based on a proposed index and study their targeted genes | Resource Linkhttp://cabgrid.res.in/cblncrnadb | JournalNucleic Acids Research | ClassGenomics | SourceRNA | Year of Publication2018 | PMID 29753807 | Corresponding AuthorA R Rao | Emailar.rao@icar.gov.in | InstituteICAR - Indian Agricultural Statistics Research Institute (IASRI) | CityNew Delhi | StateNew Delhi | Functional StatusICAR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1013 | Resource NamefunbarRF | Resource DescriptionDNA barcode-based fungal species prediction using multiclass Random Forest supervised learning model | Resource Linkhttp://cabgrid.res.in:8080/funbarrf/ | JournalBMC Genomics | ClassGenomics | SourceDNA | Year of Publication2019 | PMID 30616524 | Corresponding AuthorA R Rao | Emailrao.cshl.work@gmail.com | InstituteICAR - Indian Agricultural Statistics Research Institute (IASRI) | CityNew Delhi | StateNew Delhi | Functional StatusICAR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1015 | Resource NameFish Karyome Version 2.1 | Resource DescriptionA Chromosome Database of Fishes and Other Aquatic Organisms | Resource Linkhttp://mail.nbfgr.res.in/Fish_Karyome | JournalDatabase: The Journal of Biological Databases and Curation | ClassGenomics | SourceDNA | Year of Publication2016 | PMID 26980518 | Corresponding AuthorAjey Kumar Pathak | Emailpathakajey@rediffmail.com | InstituteICAR - National Bureau of Fish Genetic Resources (NBFGR) | CityLucknow | StateUttar Pradesh | Functional StatusICAR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1018 | Resource NamePathBuilder | Resource DescriptionOpen source software for annotationg and developing pathway resourcse | Resource Linkhttp://pathbuilder.sourceforge.net/index.html | JournalBioinformatics | ClassGenomics | SourceProtein | Year of Publication2009 | PMID 19628504 | Corresponding AuthorAkhilesh Pandey | Emailpandey@jhmi.edu | InstituteInstitute of Bioinformatics (IOB) | CityBangalore | StateKarnataka | Functional StatusIOB | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1025 | Resource NameTMC-SNPPdb | Resource DescriptionAn Indian Germline Variant Database Derived From Whole Exome Sequences | Resource Linkhttp://www.actrec.gov.in/pi-webpages/AmitDutt/TMCSNP/TMCSNPdp.html | JournalDatabase: The Journal of Biological Databases and Curation | ClassGenomics | SourceOther | Year of Publication2016 | PMID 27402678 | Corresponding AuthorAmit Dutt | Emailadutt@actrec.gov.in | InstituteAdvanced Centre for Treatment Research and Education in Cancer (ACTREC) Tata Memorial Centre | CityMumbai | StateMaharashtra | Functional StatusACTREC | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1026 | Resource NameHPVdetector | Resource DescriptionNGS-based approach to determine the presence of HPV and their sites of integration in human cancer genome | Resource Linkhttp://www.actrec.gov.in/pi-webpages/AmitDutt/HPVdetector/HPVDetector.html | JournalBritish journal of cancer | ClassVaccinomics Interactome Genomics | SourceDNA | Year of Publication2015 | PMID 25973533 | Corresponding AuthorAmit Dutt | Emailadutt@actrec.gov.in | InstituteAdvanced Centre for Treatment Research and Education in Cancer (ACTREC) Tata Memorial Centre | CityMumbai | StateMaharashtra | Functional StatusACTREC | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1027 | Resource NameDeepRanker | Resource DescriptionMethod for identifying cancer driver genes from functional genomic screens | Resource Linkhttp://www.actrec.gov.in/pi-webpages/AmitDutt/DepRanker/DepRanker.html | JournalSwiss Medical Weekly | ClassGenomics | SourceOther | Year of Publication2020 | PMID 32083704 | Corresponding AuthorAmit Dutt | Emailadutt@actrec.gov.in | InstituteAdvanced Centre for Treatment Research and Education in Cancer (ACTREC) Tata Memorial Centre | CityMumbai | StateMaharashtra | Functional StatusACTREC | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1031 | Resource NameEMSgardeN22 | Resource DescriptionDatabase maintaining functional genomics information of Nagina 22, a popular drought- and heat-tolerant upland cultivar | Resource Linkhttp://14.139.229.201/EMSgardeN22 | JournalFrontiers in plant science | ClassGenomics | SourceOther | Year of Publication2018 | PMID 30233603 | Corresponding AuthorAmitha M V Sevanthi | Emailamithamithra.nrcpb@gmail.com | InstituteICAR - National Research Centre on Plant Biotechnology (NRCPB) | CityNew Delhi | StateNew Delhi | Functional StatusICAR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1032 | Resource NameRiceMetaSys | Resource DescriptionProvides comprehensive information on salt responsive genes (SRGs) and drought responsive genes (DRGs) across genotypes, crop development stages and tissues, identified from multiple microarray datasets | Resource Linkhttp://14.139.229.201 | JournalBMC Bioinformatics | ClassGenomics Protein Function | SourceDNA | Year of Publication2017 | PMID 28964253 | Corresponding AuthorAmitha Mithra S V | Emailamithamithra.nrcpb@gmail.com | InstituteICAR - National Research Centre on Plant Biotechnology (NRCPB) | CityNew Delhi | StateNew Delhi | Functional StatusICAR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1035 | Resource NameAtREA | Resource DescriptionArabidopsis thaliana regulatory element analyzer | Resource Linkhttp://www.bioinformatics.org/grn/atrea.html | JournalInternational society for computational biology | ClassGenomics | SourceOther | Year of Publication2008 | PMID 18694893 | Corresponding AuthorAnanyo Choudhury | Emailananyo.c@gmail.com | InstituteUniversity of Calcutta | CityKolkata | StateWest Bengal | Functional StatusOther | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1039 | Resource NameMtBrowse | Resource DescriptionAn integrative genomics browser for human mitochondrial DNA | Resource Linkhttp://ab-openlab.csir.res.in/cgi-bin/gb2/gbrowse/mitolink/ | JournalMitochondrion | ClassGenomics Interactome | SourceProtein | Year of Publication2019 | PMID 30738202 | Corresponding AuthorAnshu Bhardwaj | Emailanshub@osdd.net | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1040 | Resource NamedbGAPs | Resource DescriptionContains annotation for 202 manually curated genes associated with psoriasis and its subtypes with cross-references | Resource Linkhttp://www.bmicnip.in/dbgaps/ | JournalGenomics | ClassGenomics Vaccinomics | SourceDNA | Year of Publication2017 | PMID 29031638 | Corresponding AuthorArun Kumar Jain | Emailakjain@instpath.gov.in | InstituteICMR - National Institute of Pathology (NIP) | CityNew Delhi | StateNew Delhi | Functional StatusICMR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1053 | Resource NameTPACM4 | Resource DescriptionA fast empirical GAFF compatible partial atomic charge assignment scheme for modeling interactions of small molecules with biomolecular targets | Resource Linkhttp://www.scfbio-iitd.res.in/software/drugdesign/charge.jsp | JournalJournal of Computational Chemistry | ClassGenomics | SourceOther | Year of Publication2011 | PMID 21341292 | Corresponding AuthorB Jayaram | Emailbjayaram@chemistry.iitd.ac.in | InstituteIndian Institute of Technology (IIT D) | CityNew Delhi | StateNew Delhi | Functional StatusIIT | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1057 | Resource NameSEProm | Resource DescriptionA method for predicting prokaryotic promoter based on DNA structure and energetics | Resource Linkhttp://www.scfbio-iitd.res.in/PvaxDB/ | JournalBioinformatics | ClassGenomics | SourceOther | Year of Publication2020 | PMID 31909789 | Corresponding AuthorB Jayaram | Emailbjayaram@chemistry.iitd.ac.in | InstituteIndian Institute of Technology (IIT D) | CityNew Delhi | StateNew Delhi | Functional StatusIIT | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1062 | Resource NamePRIGSA | Resource DescriptionProtein repeat identification by graph spectral analysis | Resource Linkhttp://bioinf.iiit.ac.in/PRIGSA/ | JournalJournal of bioinformatics and computational biology | ClassGenomics | SourceProtein | Year of Publication2014 | PMID 25385083 | Corresponding AuthorBroto Chakrabarty Nita Parekh | Emailbroto.chakrabarty@research.iiit.ac.in nita@iiit.ac.in | InstituteInternational Institute of Information Technology (IIITH) | CityHyderabad | StateTelangana | Functional StatusIIIT | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1063 | Resource NameVDAP-GUI | Resource DescriptionA user-friendly pipeline for variant discovery and annotation of raw next-generation sequencing data | Resource Linkhttps://sourceforge.net/projects/vdapgui/ | Journal3 Biotech | ClassGenomics | SourceOther | Year of Publication2016 | PMID 28330138 | Corresponding AuthorChaitanya G Joshi | Emailcgjoshi@aau.in | InstituteAnand Agricultural University | CityAnand | StateGujrat | Functional StatusOther | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1065 | Resource NameIIKmTA | Resource DescriptionIntra and inter kingdom miRNA transfer has boosted up the hypothesis about the potential impact of plant or animal miRNAs on each other | Resource Linkhttp://www.bioinformatics.org/iikmta/ | JournalInterdisciplinary Sciences: Computational Life Sciences | ClassGenomics | SourceRNA | Year of Publication2018 | PMID 29549628 | Corresponding AuthorChittabrata Mal | Emailcmal@kol.amity.edu | InstituteAmity University | CityKolkata | StateWest Bengal | Functional StatusOther | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1067 | Resource NameRAmiRNA | Resource DescriptionSoftware suite for generation of SVMbased prediction models of mature miRNAs | Resource Linkhttp://ircb.iiita.ac.in | JournalBioinformation | ClassGenomics Vaccinomics | SourceRNA | Year of Publication2012 | PMID 22829735 | Corresponding AuthorCVS Siva Prasad | Emailshiva@iiita.ac.in | InstituteIndian Institute of Information Technology (IIIT-A) | CityAllahabad | StateUttar Pradesh | Functional StatusIIIT | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1068 | Resource NameIGVBrowser | Resource DescriptionA genomic variation resource from diverse Indian populations | Resource Linkhttp://igvbrowser.igib.res.in | JournalDatabase: The Journal of Biological Databases and Curation | ClassGenomics | SourceOther | Year of Publication2010 | PMID 20843867 | Corresponding AuthorDebasis Dash | Emailddash@igib.res.in | InstituteCSIR - Institute of Genomics and Integrative Biology (CSIR-IGIB) | CityNew Delhi | StateNew Delhi | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1082 | Resource NamePAmiRDB | Resource DescriptionResource for plant miRNAs targeting viruses | Resource Linkhttp://bioinfo.icgeb.res.in/pamirdb | JournalScientific Reports | ClassGenomics | SourceRNA | Year of Publication2019 | PMID 30874591 | Corresponding AuthorDinesh Gupta | Emaildinesh@icgeb.res.in | InstituteDBT - International Centre for Genetic Engineering and Biotechnology (ICGEB) | CityNew Delhi | StateNew Delhi | Functional StatusDBT | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1086 | Resource NamemiRMOD | Resource DescriptionA tool for identification and analysis of 5 and 3 miRNA modifications in Next Generation Sequencing small RNA data | Resource Linkhttp://bioinfo.icgeb.res.in/miRMOD/ | JournalPeer J | ClassGenomics | SourceRNA | Year of Publication2015 | PMID 26623179 | Corresponding AuthorDinesh Gupta | Emaildinesh@icgeb.res.in | InstituteDBT - International Centre for Genetic Engineering and Biotechnology (ICGEB) | CityNew Delhi | StateNew Delhi | Functional StatusDBT | Funding AgencyFunctional | Resource categoryPrediction | Other Repositorybio.tools |
ID1087 | Resource NameplantVSupPred | Resource DescriptionSupervised learning classification models for prediction of plant virus encoded RNA silencing suppressors | Resource Linkhttp://bioinfo.icgeb.res.in/pvsup/ | JournalPLOS One | ClassGenomics | SourceRNA | Year of Publication2014 | PMID 24828116 | Corresponding AuthorDinesh Gupta | Emaildinesh@icgeb.res.in | InstituteDBT - International Centre for Genetic Engineering and Biotechnology (ICGEB) | CityNew Delhi | StateNew Delhi | Functional StatusDBT | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1092 | Resource NameDuct-BRCA-CSP | Resource DescriptionPrediction method foe invasive ductal carcinoma progression based on gene expression data | Resource Linkhttp://bioinfo.icgeb.res.in/duct-BRCA-CSP | JournalScientific Reports | ClassGenomics | SourceRNA | Year of Publication2020 | PMID 32139710 | Corresponding AuthorDinesh Gupta | Emaildinesh@icgeb.res.in | InstituteDBT - International Centre for Genetic Engineering and Biotechnology (ICGEB) | CityNew Delhi | StateNew Delhi | Functional StatusDBT | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1093 | Resource NameiRSVPred | Resource DescriptionArtificial Intelligence based prediction method for identifying basmati paddy seed | Resource Linkhttp://14.139.62.220/rice/. | JournalFrontiers in Plant Science | ClassGenomics | SourceOther | Year of Publication2020 | PMID 32158451 | Corresponding AuthorDinesh Gupta | Emaildinesh@icgeb.res.in | InstituteDBT - International Centre for Genetic Engineering and Biotechnology (ICGEB) | CityNew Delhi | StateNew Delhi | Functional StatusDBT | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1095 | Resource NameApicoTFdb | Resource DescriptionThe Comprehensive Web Repository of Apicomplexan Transcription Factors and Transcription-Associated Co-Factors | Resource Linkhttp://bioinfo.icgeb.res.in/PtDB/ | JournalDatabase: The Journal of Biological Databases and Curation | ClassGenomics | SourceOther | Year of Publication2019 | PMID 31529106 | Corresponding AuthorDinesh Gupta | Emaildinesh@icgeb.res.in | InstituteDBT - International Centre for Genetic Engineering and Biotechnology (ICGEB) | CityNew Delhi | StateNew Delhi | Functional StatusDBT | Funding AgencyFunctional | Resource categoryDatabase | Other Repositorybio.tools |
ID1096 | Resource NameTamiRPred | Resource DescriptionDevelopment of species specific putative miRNA and its target prediction tool in wheat | Resource Linkhttp://webtom.cabgrid.res.in/tamirpred | JournalScientific Reports | ClassGenomics | SourceRNA | Year of Publication2019 | PMID 30846812 | Corresponding AuthorDinesh Kumar | Emaildinesh.kumar@icar.gov.in | InstituteICAR - Indian Council of Agricultural Research | CityNew Delhi | StateNew Delhi | Functional StatusICAR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1097 | Resource NameVmTDB | Resource DescriptionDevelopment of transcriptome based web genomic resources of yellow mosaic disease in Vigna mungo | Resource Linkhttp://webtom.cabgrid.res.in/vmtdb/ | JournalPhysiology and molecular biology of plants: An international journal functional plant biology | ClassGenomics | SourceDNA | Year of Publication2017 | PMID 29158627 | Corresponding AuthorDinesh Kumar | Emaildinesh.kumar@icar.gov.in | InstituteICAR - Indian Agricultural Statistics Research Institute (IASRI) | CityNew Delhi | StateNew Delhi | Functional StatusICAR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1098 | Resource NameTaSSR | Resource DescriptionChromosome-wise SSR calling for all the three sub genomes along with choice of motif types is provided in addition to the primer generation for desired marker | Resource Linkhttp://webtom.cabgrid.res.in/wheatssr/ | JournalFrontiers in plant science | ClassGenomics | SourceDNA | Year of Publication2017 | PMID 29234333 | Corresponding AuthorDinesh Kumar | Emaildinesh.kumar@icar.gov.in | InstituteICAR - Indian Council of Agricultural Research | CityNew Delhi | StateNew Delhi | Functional StatusICAR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1100 | Resource NameSBMDb | Resource DescriptionFirst whole genome putative microsatellite DNA marker database of sugarbeet for bioenergy and industrial applications | Resource Linkhttp://webapp.cabgrid.res.in/sbmdb/. | JournalDatabase: The Journal of Biological Databases and Curation | ClassGenomics | SourceDNA | Year of Publication2015 | PMID 26647370 | Corresponding AuthorDinesh Kumar | Emaildineshkumarbhu@gmail.com | InstituteICAR - Indian Agricultural Statistics Research Institute (IASRI) | CityNew Delhi | StateNew Delhi | Functional StatusICAR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1101 | Resource NameSCMVTDb | Resource DescriptionA catalogue of putatuve markers, molecular markers, candidate genes and transcript information related to mosaic disease of small cardamom | Resource Linkhttp://webtom.cabgrid.res.in/scmvtdb | JournalGenomics | ClassGenomics | SourceOther | Year of Publication2020 | PMID 31770586 | Corresponding AuthorDinesh Kumar | Emaildinesh.kumar@icar.gov.in | InstituteICAR - Indian Council of Agricultural Research | CityNew Delhi | StateNew Delhi | Functional StatusICAR | Funding AgencyFunctional | Resource categoryDatabase | Other Repositorybio.tools |
ID1102 | Resource NamePolyMorphPredict | Resource DescriptionA Universal Web-Tool for Rapid Polymorphic Microsatellite Marker Discovery From Whole Genome and Transcriptome Data | Resource Linkhttp://webtom.cabgrid.res.in/polypred/ | JournalFrontiers in plant science | ClassGenomics | SourceDNA | Year of Publication2019 | PMID 30687361 | Corresponding AuthorDinesh Kumar | Emaildinesh.kumar@icar.gov.in | InstituteICAR - Indian Council of Agricultural Research | CityNew Delhi | StateNew Delhi | Functional StatusICAR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1103 | Resource NameMiSNPDb | Resource DescriptionA Web-Based Genomic Resources of Tropical Ecology Fruit Mango (Mangifera Indica L.) for Phylogeography and Varietal Differentiation | Resource Linkhttp://webtom.cabgrid.res.in/mangosnps/ | JournalScientific Reports | ClassGenomics | SourceOther | Year of Publication2017 | PMID 29097776 | Corresponding AuthorDinesh Kumar | Emaildinesh.kumar@icar.gov.in | InstituteICAR - Indian Council of Agricultural Research | CityNew Delhi | StateNew Delhi | Functional StatusICAR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1104 | Resource NameMSDB | Resource DescriptionDatabase is by far the most exhaustive resource to access and analyze SSR data of multiple species | Resource Linkhttp://tdb.ccmb.res.in/msdb | JournalGenome biology and evolution | ClassGenomics | SourceOther | Year of Publication2017 | PMID 28854643 | Corresponding AuthorDivya Tej Sowpati | Emailtej@ccmb.res.in | InstituteCSIR - Centre for Cellular and Molecular Biology (CSIR-CCMB) | CityHyderabad | StateTelangana | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other Repositorybio.tools |
ID1105 | Resource NameCRISPcut | Resource DescriptionTool for designing optimal sgRNAs for CRISPR/Cas9 based experiments in human cells | Resource Linkhttp://web.iitd.ac.in/crispcut | JournalGenomics | ClassGenomics | SourceRNA | Year of Publication2018 | PMID 29605634 | Corresponding AuthorDurai Sundar | Emailsundar@dbeb.iitd.ac.in | InstituteIndian Institute of Technology (IIT D) | CityNew Delhi | StateNew Delhi | Functional StatusIIT | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1113 | Resource NameHumCFS | Resource DescriptionA database of fragile sites in human chromosomes | Resource Linkhttp://webs.iiitd.edu.in/raghava/humcfs/ | JournalBMC Genomics | ClassGenomics | SourceDNA | Year of Publication2019 | PMID 30999860 | Corresponding AuthorGajendra PS Raghava | Emailraghava@iiitd.ac.in | InstituteIndraprastha Institute of Information Technology (IIITD) | CityNew Delhi | StateNew Delhi | Functional StatusIIIT | Funding AgencyFunctional | Resource categoryDatabase | Other Repositorybio.tools |
ID1117 | Resource NameCancerLSP | Resource DescriptionLiver Heptacellular Carcinoma Stage Prediction | Resource Linkhttps://webs.iiitd.edu.in/raghava/cancerlsp/ | JournalPLOS One | ClassGenomics | SourceOther | Year of Publication2019 | PMID 31490960 | Corresponding AuthorGajendra PS Raghava | Emailraghava@iiitd.ac.in | InstituteIndraprastha Institute of Information Technology (IIITD) | CityNew Delhi | StateNew Delhi | Functional StatusIIIT | Funding AgencyFunctional | Resource categoryDatabase | Other Repositorybio.tools |
ID1127 | Resource NameCancerCSP | Resource DescriptionGene expression-based biomarkers for discriminating early and late stage of clear cell renal cancer | Resource Linkhttp://webs.iiitd.edu.in/raghava/cancercsp/ | JournalScientific Reports | ClassGenomics | SourceDNA | Year of Publication2017 | PMID 28349958 | Corresponding AuthorGajendra PS Raghava | Emailraghava@iiitd.ac.in | InstituteIndraprastha Institute of Information Technology (IIITD) | CityNew Delhi | StateNew Delhi | Functional StatusIIIT | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1132 | Resource NamedbEM | Resource DescriptionA database of epigenetic modifiers curated from cancerous and normal genomes | Resource Linkhttp://webs.iiitd.edu.in/raghava/dbem/# | JournalScientific Reports | ClassGenomics | SourceDNA | Year of Publication2016 | PMID 26777304 | Corresponding AuthorGajendra PS Raghava | Emailraghava@iiitd.ac.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1145 | Resource NameCancertope | Resource DescriptionWide range of tools are incorporated in this platform that includes screening of epitopes against human reference proteome | Resource Linkhttp://webs.iiitd.edu.in/raghava/cancertope/ | JournalPLOS One | ClassGenomics BioDrug | SourceProtein | Year of Publication2016 | PMID 27832200 | Corresponding AuthorGajendra PS Raghava | Emailraghava@iiitd.ac.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1156 | Resource NamePCMdb | Resource DescriptionPancreatic cancer methylation database | Resource Linkhttp://webs.iiitd.edu.in/raghava/pcmdb/ | JournalScientific Reports | ClassGenomics | SourceOther | Year of Publication2014 | PMID 24569397 | Corresponding AuthorGajendra PS Raghava | Emailraghava@iiitd.ac.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1167 | Resource NameCancerDR | Resource DescriptionCancer drug resistance database | Resource Linkhttp://webs.iiitd.edu.in/raghava/cancerdr/ | JournalScientific Reports | ClassGenomics BioDrug | SourceOther | Year of Publication2013 | PMID 23486013 | Corresponding AuthorGajendra PS Raghava | Emailraghava@iiitd.ac.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1181 | Resource NameMARSpred | Resource DescriptionPredicting sub-cellular localization of tRNA synthetases from their primary structures | Resource Linkhttp://webs.iiitd.edu.in/raghava/marspred/ | JournalAmino acids | ClassGenomics Protein Function | SourceRNA | Year of Publication2012 | PMID 21400228 | Corresponding AuthorGajendra PS Raghava | Emailraghava@iiitd.ac.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryBTISNet |
ID1196 | Resource Nameicaars | Resource Descriptionrediction and classification of aminoacyl tRNA synthetases using PROSITE domains | Resource Linkhttp://webs.iiitd.edu.in/raghava/icaars/ | JournalBMC research | ClassGenomics | SourceRNA | Year of Publication2010 | PMID 20860794 | Corresponding AuthorGajendra PS Raghava | Emailraghava@iiitd.ac.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryBTISNet |
ID1234 | Resource NameLGEpred | Resource DescriptionCorrelation analysis and prediction of genes expression from amino acid sequence of proteins | Resource Linkhttp://webs.iiitd.edu.in/raghava/lgepred/ | JournalBMC Bioinformatics | ClassGenomics | SourceProtein | Year of Publication2005 | PMID 15773999 | Corresponding AuthorGajendra PS Raghava | Emailraghava@iiitd.ac.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryPrediction | Other Repositorybio.tools, BTISNet |