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Browse result page of IndioBioDb

The total number entries retrieved from this search are 199
IDResource NameResource DescriptionResource LinkJournalClassSourceYear of PublicationPMIDCorresponding AuthorEmailInstituteCityStateFunctional StatusFunding AgencyResource categoryOther Repository
1504MusatransSSRDBTranscriptome derived SSR databasehttp://bioinfnrcb.byethost7.com/nrcbbio/?i=1Journal of biosciencesGenomicsDNA2019 30837356Subbaraya Umaumabinit@yahoo.co.inICAR - National Research Centre for BananaTiruchirappalliTamil NaduICARFunctionalDatabaseNA
1507CCDBA curated database of genes involved in cervix cancerhttp://webs.iiitd.edu.in/raghava/ccdb/Nucleic Acids ResearchGenomicsDNA2011 21045064Subhash M Agarwalsmagarwal@yahoo.comCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalDatabasebio.tools
1514RiboscanAn efficient pHMM-based web-server to detect riboswitches in genomic sequenceshttp://service.iiserkol.ac.in/~riboscan/BioinformaticsGenomicsRNA2002 26519506Sumit Mukherjeemukherjee.sumit89@gmail.comIndian Institute of Science Education and Research (IISERK)KolkataMadhya PradeshIISERFunctionalPredictionNA
1515RiboDComprehensive database for prokaryotic riboswitcheshttp://ribod.iiserkol.ac.in/BioinformaticsGenomicsRNA2019 30726866Sumit Mukherjee Supratim Senguptamukherjee.sumit89@gmail.com supratim.sen@iiserkol.ac.inIndian Institute of Science Education and Research (IISERK)KolkataMadhya PradeshIISERFunctionalDatabasebio.tools
1516MirtronPredIdentification of mirtrons in rice using MirtronPred: a tool for predicting plant mirtronshttp://bioinfo.icgeb.res.in/mirtronPredGenomicsGenomicsRNA2012 22546559Sunil Kumar Mukherjee Neeti Sanan-Mishrasunilm@icgeb.res.in neeti@icgeb.res.inInternational Centre for Genetic Engineering and Biotechnology (ICGEB)New DelhiNew DelhiOtherFunctionalPredictionBTISNet
1517BedSectIntegrated Platform to Perform Intersection, Visualization, and Functional Annotation of Genomic Regions From Multiple Datasetshttp://imgsb.org/bedsect/.Frontiers in GeneticsGenomicsOther2020 32117432Sunil Kumar Raghavsunilraghav@ils.res.inInstitute of Life SciencesBhubaneswarOrissaDBTFunctionalDatabaseNA
1519CNSNPGenome-wide cis-regulatory signatures for modulation of agronomic traits as exemplified by drought yield index (DYI) in chickpeahttp://www.cnsnpcicarbase.comFunctional and Integrative GenomicsGenomicsDNA2019 31177403Swarup K. Paridaswarup@nipgr.ac.inDBT - National Institute of Plant Genome Research (NIPGR)New DelhiNew DelhiDBTFunctionalDatabaseNA
1520GEDASGene Expression Data Analysis Suitehttp://gedas.bizhat.com/gedas.htmBioinformationGenomicsDNA2006 17597861Tangirala Venkateswara Prasadtvprasad2002@yahoo.comJamia Millia Islamia UniversityNew DelhiNew DelhiOtherFunctionalPredictionbio.tools
1521TeaMiDA database of simple sequence repeat markers of teahttp://indianteagenome.in:8080/teamid/Database: The Journal of Biological Databases and CurationGenomicsOther2020 32159215Tapan Kumar Mondalmondaltk@yahoo.comICAR - National Institute for Plant BiotechnologyNew DelhiNew DelhiICARFunctionalDatabaseNA
1524DREMECELSCurated Database for Base Excision and Mismatch Repair Mechanisms Associated Human Malignancieshttp://www.bioinfoindia.org/dremecelsPLOS OneGenomicsDNA2016 27276067Tiratha Raj Singhtiratharaj@gmail.comJaypee University of Information Technology (JUIT)SolanHimachal PradeshJUITFunctionalDatabaseNA
1525WebFARMweb server for finite automated restriction mappinghttp://webfarm.bioinfoindia.org/BioinformationGenomicsOther2010 20975896Tiratha Raj Singhtiratharaj@gmail.comSchool of BiotechnologyIndoreMadhya PradeshOtherFunctionalPredictionNA
1526DR-GASDNA Repair database of genetic association studies for human DNA repair systemshttp://bioinfoindia.org/drgas/DNA RepairGenomicsDNA2014 24548788Tiratha Raj Singhtiratharaj@gmail.comJaypee University of Information Technology (JUIT)SolanHimachal PradeshJUITFunctionalDatabaseNA
1527EUSNPDBMining the Eucalyptus transcriptome for SNP and indel variation and their types, nucleotide diversity and to pro- vide information as public domain database.http://bioinfoindia.org/eusnpdb/Journal of geneticsGenomicsOther2011 21873771Tiratha Raj Singhtiratharaj@gmail.comJaypee University of Information Technology (JUIT)SolanHimachal PradeshJUITFunctionalDatabaseNA
1528ABCDAlzheimer's Disease Biomarkers Comprehensive Databasehttp://bioinfoindia.org/abcd/3 BiotechGenomics VaccinomicsOther2019 31501752Tiratha Raj Singhtiratharaj@gmail.comJaypee University of Information Technology (JUIT)SolanHimachal PradeshJUITFunctionalDatabaseNA
1529SHIFTServer for Hidden stops analysis In Frame-shifted Translationshttp://bioinfoindia.org/shift/BMC Research NotesGenomicsOther2013 23432998Tiratha Raj Singhtiratharaj@gmail.comJaypee University of Information Technology (JUIT)SolanHimachal PradeshJUITFunctionalDatabaseNA
1533FrameOUTA method for analysing frame shift mutationshttp://bioinfoindia.org/frameout/International Journal for Computational BiologyGenomicsOther2018 NATiratha Raj Singhtiratharaj@gmail.comJaypee University of Information Technology (JUIT)SolanHimachal PradeshJUITFunctionalPredictionNA
1534Shift DBA database which identifies hidden stop codons in the genomic DNA sequence.http://bioinfoindia.org/shiftdb/F1000 PostersGenomicsDNA2012 NATiratha Raj Singhtiratharaj@gmail.comJaypee University of Information Technology (JUIT)SolanHimachal PradeshJUITFunctionalDatabaseNA
1535MOGA-SVMCombining Pareto:optimal clusters using supervised learning for identifying co:expressed geneshttp://anirbanmukhopadhyay.50webs.com/mogasvm.htmlBMC BioinformaticsGenomicsDNA2009 19154590Ujjwal Maulikdrumaulik@cse.jdvu.ac.inJadavpur UniversityKolkataWest BengalOtherFunctionalPredictionNA
1536RV-TyperA Web Server for Typing of Rhinoviruses Using Alignment-Free Approachhttp://196.1.114.46:1800/RV-Typer/home.htmlPLOS OneGenomicsOther2016 26870949Urmila Kulkarni Kaleurmila@bioinfo.net.inUniversity of PunePuneMaharashtraOtherFunctionalDatabasebio.tools, BTISNet
1537WNV TyperA server for genotyping of West Nile viruses using an alignment:free method based on a return time distributionhttp://196.1.114.46:1800/wnv/homepage.htmlJournal virological methodsGenomicsOther2014 24388930Urmila Kulkarni Kaleurmila@bioinfo.net.inUniversity of PunePuneMaharashtraOtherFunctionalPredictionbio.tools, BTISNet
1539VirGenA comprehensive viral genome resourcehttps://www.hsls.pitt.edu/obrc/index.php/index.php?page=URL1096646372Nucleic Acids ResearchGenomicsDNA2004 14681415Urmila Kulkarni Kaleurmila@bioinfo.ernet.inUniversity of PunePuneMaharashtraOtherFunctionalDatabaseBTISNet
1540FBISA regional DNA barcode archival & analysis system for Indian fisheshttp://mail.nbfgr.res.in/fbis/BioinformationGenomicsDNA2012 22715304Uttam Kumar Sarkarusarkar1 @rediffmail.comICAR - National Bureau of Fish Genetic Resources (NBFGR)LucknowUttar PradeshICARFunctionalDatabaseNA
1542CEMIDMining of expressed sequence tag libraries of cacao for microsatellite markers using five computational toolshttp://riju.byethost31.com/cocoa/Journal of geneticsGenomicsOther2009 19700860Vadivel Arunachalamvadivelarunachalam@yahoo.comICAR - Central Plantation Crops Research Institute (CPCRI)KasaragodKeralaICARFunctionalDatabaseNA
1544WebGesSTer DBA transcription terminator databasehttp://pallab.serc.iisc.ernet.in/gesterNucleic Acids ResearchGenomicsDNA2011 20972211Valakunja Nagarajavraj@mcb1.iisc.ernet.inIndian Institute of Science (IISc)BangaloreKarnatakaIIScFunctionalDatabaseNA
1546CellAtlasSearchCellAtlasSearch features over 300 000 reference expression profiles including both bulk and single-cell datahttp://www.cellatlassearch.com/Nucleic Acids ResearchGenomicsDNA2018 29788498Vibhor Kumar Debarka Senguptavibhor@iiitd.ac.in debarka@iiitd.ac.inIndraprastha Institute of Information Technology (IIITD)New DelhiNew DelhiIIITFunctionalDatabaseNA
1547RemeDBTool for rapid prediction of enzyme involved in bioremediationhttps://www.niot.res.in/Remedb/Journal of Computational BiologyGenomicsProtein2019 31800321Vijay Raghavan Rangamaran Dharani Gopalvijay.niot@nic.in dharani.niot@nic.inNational Institute of Ocean TechnologyChennaiTamil NaduOtherFunctionalPredictionbio.tools
155116S classifierA tool for fast and accurate taxonomic classification of 16S rRNA hypervariable regions in metagenomic datasetshttp://metabiosys.iiserb.ac.in/16SclassifierPLOS OneGenomicsRNA2015 25646627Vineet K Sharmavineetks@iiserb.ac.inIndian Institute of Science Education and Research (IISERB)BhopalMadhya PradeshIISERFunctionalPredictionNA
1557CID-miRNAA Web Server for Prediction of Novel miRNA Precursors in Human Genomehttp://mirna.jnu.ac.in/cidmirna/Biochemical and biophysical research communicationsGenomicsRNA2008 18522801Alok Bhattacharyaalok.bhattacharya@gmail.comJawaharlal Nehru University (JNU)New DelhiNew DelhiJNUNon-FunctionalPredictionNA
1558MycosecDatabase for Mycobacterium secretome analysishttp://www.bicnbu.in/mycosecOmicsGenomics Protein FunctionOther2013 23952586Arnab Sensenarnab_nbu@hotmail.comUniversity of North BengalSiliguriWest BengalOtherFunctionalDatabaseBTISNet
1559BOSSResource of experimentally validated breast oncogenic siRNAshttp://bioinformatics.cimap.res.in/sharma/boss/Scientific ReportsGenomics VaccinomicsRNA2017 28821760Ashok Sharmaashoksharma@cimap.res.inCSIR - Central Institute of Medicinal and Aromatic Plants (CSIR-CIMAP)LucknowUttar PradeshCSIRNon-FunctionalDatabaseNA
1560HGV&TBComprehensive online resource on human genes and genetic variants associated with tuberculosishttp://genome.igib.res.in/hgvtb/index.htmlDatabase: The Journal of Biological Databases and CurationGenomics VaccinomicsDNA2014 25502817Deeksha BhartiyaDeeksha.bhartiya@gmail.comDelhi Technological University (DTU)New DelhiNew DelhiDTUNon-FunctionalDatabaseNA
1561PIPEMicroDBMicrosatellite database and primer generation tool for pigeonpea genomehttp://cabindb.iasri.res.in/pigeonpea/Database: The Journal of Biological Databases and CurationGenomicsDNA2013 23396298Dinesh Kumardinesh.kumar@icar.gov.inICAR - Indian Agricultural Statistics Research Institute (IASRI)New DelhiNew DelhiICARNon-FunctionalDatabaseNA
1567PineElm_SSRdbComplete genome sequence of pineapple available in the public domain can be used to develop numerous novel SSRs",http://app.bioelm.com/"http://app.bioelm.com/HereditasGenomicsDNA2016 28096778Jeshima Khan YasinYasin.Jeshima@icar.gov.inICAR - National Bureau of Plant Genomic Resources (NBPGR)New DelhiNew DelhiICARNon-FunctionalDatabaseNA
1571RicebaseGenome-wide analyses of rice root development QTLs and development of an online resourcehttp://www.ricebrowse.orgBioinformationGenomicsDNA2009 19255649Kandasamy Ulaganathankulaganathan123@gmail.comOsmania UniversityHyderabadTelanganaOtherNon-FunctionalDatabaseNA
1578MODIIDeveloped with a holistic approach for collecting information about phenomic and genomic information of agriculturally important insectshttp://cib.res.in/database.phpBioinformationGenomicsDNA2018 29618898Maria Pratheepampratheepa@gmail.comICAR - National Bureau of Agricultural Insect Resources (NBAIR)BangaloreKarnatakaICARNon-FunctionalDatabaseNA
1579PvTFDBDatabase will also serve as a promising central repository for researchers as well as breeders who are working towards crop improvement of legume cropshttp://www.multiomics.in/PvTFDB/Database: The Journal of Biological Databases and CurationGenomicsOther2016 27465131MNV Prasad Gajulagajula.ibt@gmail.comInstitute of Biotechnology PJTSAUHyderabadTelanganaOtherNon-FunctionalDatabaseNA
1582miRnalyzeAn interactive database linking tool to unlock intuitive microRNA regulation of cell signaling pathwayshttp://www.mirnalyze.inDatabase: The Journal of Biological Databases and CurationGenomicsRNA2017 28365733Nishant Chakravortynishant@smst.iitkgp.ernet.inIndian Institute of Technology (IIT KGP)KharagpurWest BengalIITNon-FunctionalDatabaseNA
1587A2MDBCurated compendium of information on Aspergillus & its secondary metabolomehttp://www.iictindia.org/A2MDBScientific ReportsGenomicsOther2017 28779078Suryanarayana Murty Upadhyayula Ramars Amanchydirector@niperguwahati.ac.in ramars@iict.res.inNational Institute of Pharmaceutical Education and Research (NIPER) Guwahati CSIR-Indian Institute of Chemical Technology (CSIR-IICGuwahati HyderabadAssam TelanganaNIPERNon-FunctionalDatabaseNA
1589PCOSKBA KnowledgeBase on genes, diseases, ontology terms and biochemical pathways associated with PolyCystic Ovary Syndromehttp://pcoskb.bicnirrh.res.inNucleic Acids ResearchGenomics InteractomeDNA2015 26578565Susan Idicula Thomasthomass@nirrh.res.inICMR - National Institute for Research in Reproductive Health (NIRRH)MumbaiMaharashtraICMRFunctionalDatabaseNA
1590SeriPortComprehensive view of the web-resources related to sericulturehttp://www.seriport.in/Database: The Journal of Biological Databases and CurationGenomicsOther2016 27307138Utpal Boraubora@iitg.ernet.inIndian Institute of Technology (IIT G)GuwahatiAssamIITNon-FunctionalDatabaseNA
1592MycoRRdbA database of computationally identified regulatory regions within intergenic sequences in mycobacterial genomeshttp://mycorrdb.uohbif.inPLOS OneGenomicsDNA2012 22563442Vaibhav Vindalvvls@uohyd.ernet.inUniversity of HyderabadHyderabadTelanganaOtherNon-FunctionalDatabaseNA
1593CCIDA database for coconut crop improvementhttp://www.bioinfcpcri.orgBioinformationGenomicsOther2005 17597858Velamoor Rajagopalbioinfcpcri@yahoo.co.ukICAR - Central Plantation Crops Research Institute (CPCRI)KasaragodKeralaICARNon-FunctionalDatabaseNA
1597MP3A software tool for the prediction of pathogenic proteins in genomic and metagenomic datahttp://metagenomics.iiserb.ac.in/mp3/index.phpPLOS OneGenomicsProtein2014 24736651Vineet K Sharmavineetks@iiserb.ac.inIndian Institute of Science Education and Research (IISERB)BhopalMadhya PradeshIISERFunctionalPredictionbio.tools
1598FishWikiCrowdsourcing approach to connect the long tail for zebrafish gene annotationhttp://genome.igib.res.in/twikiDatabase: The Journal of Biological Databases and CurationGenomicsDNA2014 24578356Vinod Scariavinods@igib.inCSIR - Institute of Genomics and Integrative Biology (CSIR-IGIB)New DelhiNew DelhiCSIRNon-FunctionalDatabaseNA
1599IncRNomeA comprehensive knowledgebase of human long noncoding RNAshttp://genome.igib.res.in/lncRNomeDatabase: The Journal of Biological Databases and CurationGenomicsRNA2013 23846593Vinod Scariavinods@igib.inCSIR - Institute of Genomics and Integrative Biology (CSIR-IGIB)New DelhiNew DelhiCSIRNon-FunctionalDatabaseNA
1600snoLOVDSystematic curation and analysis of genomic variations and their potential functional consequences in snoRNA locihttp://genome.igib.res.in/snolovdHuman mutationGenomicsRNA2012 22778062Vinod Scariavinods@igib.inCSIR - Institute of Genomics and Integrative Biology (CSIR-IGIB)New DelhiNew DelhiCSIRNon-FunctionalDatabaseNA
1601tbvarA comprehensive genome variation resource for Mycobacterium tuberculosishttp://genome.igib.res.in/tbvar/Database: The Journal of Biological Databases and CurationGenomicsDNA2014 24408216Vinod Scariavinods@igib.inCSIR - Institute of Genomics and Integrative Biology (CSIR-IGIB)New DelhiNew DelhiCSIRNon-FunctionalDatabaseNA
1602LncRBaseAn enriched resource for lncRNA informationhttp://bicresources.jcbose.ac.in/zhumur/lncrbase/PLOS OneGenomicsRNA2014 25233092Zhumur Ghoshzhumur@jcbose.ac.inBose InstituteKolkataWest BengalOtherFunctionalDatabaseNA
1603piRNAQuestSearching the piRNAome for silencershttp://bicresources.jcbose.ac.in/zhumur/pirnaquest/BMC GenomicsGenomicsRNA2014 24997126Zhumur Ghoshzhumur@jcbose.ac.inBose InstituteKolkataWest BengalOtherFunctionalDatabaseNA