The total number entries retrieved from this search are 199

ID	Resource Name	Resource Description	Resource Link	Journal	Class	Source	Year of Publication	PMID	Corresponding Author	Email	Institute	City	State	Functional Status	Funding Agency	Resource category	Other Repository
1362	vhfRNAi	A Web-Platform for Analysis of Host Genes Involved in Viral Infections Discovered by Genome Wide RNAi Screens	http://bioinfo.imtech.res.in/manojk/vhfrnai	Molecular BioSystems	Genomics	DNA	2017	28561835	Manoj Kumar	manojk@imtech.res.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Prediction	NA
1373	AggreRATE-Pred	Prediction method for change in aggregation rate point upon mutation	http://www.iitm.ac.in/bioinfo/aggrerate-pred/	Bioinformatics	Genomics	Other	2020	31599925	Michael Gromiha	gromiha@iitm.ac.in	Indian Institute of Technology (IIT M)	Chennai	Tamil Nadu	IIT	Functional	Prediction	bio.tools
1374	Pred-MutHTP	A method for predicting disease causing and neutral mutations in human transmembrane proteins	https://www.iitm.ac.in/bioinfo/PredMutHTP/.	Human Mutation	Genomics Protein Function	Protein	2020	31821684	Michael Gromiha	gromiha@iitm.ac.in	Indian Institute of Technology (IIT M)	Chennai	Tamil Nadu	IIT	Functional	Prediction	NA
1378	HuVarBase	A Human Variant Database With Comprehensive Information at Gene and Protein Levels	https://www.iitm.ac.in/bioinfo/huvarbase/	PLOS One	Genomics	DNA	2019	30703169	Michael Gromiha	gromiha@iitm.ac.in	Indian Institute of Technology (IIT M)	Chennai	Tamil Nadu	IIT	Functional	Prediction	NA
1380	CTDB	An Integrated Chickpea Transcriptome Database for Functional and Applied Genomics	http://nipgr.res.in/ctdb.html	PLOS One	Genomics	DNA	2015	26322998	Mukesh Jain	mjain@nipgr.ac.in	DBT - National Institute of Plant Genome Research (NIPGR)	New Delhi	New Delhi	DBT	Functional	Database	NA
1381	RiceSRTFDB	A database of rice transcription factors containing comprehensive expression, cis-regulatory element and mutant information to facilitate gene function analysis	http://www.nipgr.res.in/RiceSRTFDB.html	Database: The Journal of Biological Databases and Curation	Genomics	DNA	2013	23660286	Mukesh Jain	mjain@nipgr.ac.in	DBT - National Institute of Plant Genome Research (NIPGR)	New Delhi	New Delhi	DBT	Functional	Database	NA
1382	NGS QC Toolkit	A toolkit for quality control of next generation sequencing data	http://www.nipgr.res.in/ngsqctoolkit.html	PLOS One	Genomics	Other	2012	22312429	Mukesh Jain	mjain@nipgr.res.in	DBT - National Institute of Plant Genome Research (NIPGR)	New Delhi	New Delhi	DBT	Functional	Prediction	NA
1383	KinG	A database of protein kinases in genomes	http://king.mbu.iisc.ernet.in/	Nucleic Acids Research	Genomics Protein Structure	Protein	2004	14681382	N Srinivasan	ns@mbu.iisc.ernet.in	Indian Institute of Science (IISc)	Bangalore	Karnataka	IISc	Functional	Database	NA
1393	PtRFdb	Detailed and comprehensive information is available for each tRF entry	http://www.nipgr.res.in/PtRFdb/.	Database: The Journal of Biological Databases and Curation	Genomics	Other	2018	29939244	Shailesh Kumar	shailesh@nipgr.ac.in	NIPGR - National Institute of Plant Genome Research	New Delhi	New Delhi	NIPGR	Functional	Database	NA
1394	CicerTransDB	Resource for expression and functional study of chickpea transcription factors	http://www.cicertransdb.esy.es	BMC plant biology	Genomics	Other	2016	27472917	Niranjan Chakraborty	nchakraborty@nipgr.ac.in	DBT - National Institute of Plant Genome Research (NIPGR)	New Delhi	New Delhi	DBT	Functional	Database	NA
1395	Onco-Regulon	An integrated database of regulatory motifs of cancer genes clubbed with Unique Sequence-Predictor (USP) a software suite that identifies unique sequences for each of these regulatory DNA motifs at the specified position in the genome	http://www.scfbio-iitd.res.in/software/onco/NavSite/index.htm	Database: The Journal of Biological Databases and Curation	Genomics	DNA	2016	27515825	Nirotpal Mrinal B Jayaram	nmrinal@gmail.com bjayaram@chemistry.iitd.ac.in	Indian Institute of Technology (IIT D)	New Delhi	New Delhi	IIT	Functional	Database	NA
1396	miRway	Collects an exhaustive list of miRNA-pathway association entries for 76 critical disease conditions by reviewing 663 published articles	http://www.mirway.iitkgp.ac.in/	Database: The Journal of Biological Databases and Curation	Genomics	RNA	2018	29688364	Nishant Chakravorty	nishant@smst.iitkgp.ernet.in	Indian Institute of Technology (IIT KGP)	Kharagpur	West Bengal	IIT	Functional	Database	NA
1398	IGIPT	Integrated genomic island prediction tool	http://bioinf.iiit.ac.in/IGIPT/	Bioinformation	Genomics	Other	2011	22355227	Nita Parekh	nita@iiit.ac.in	International Institute of Information Technology (IIITH)	Hyderabad	Telangana	IIIT	Functional	Prediction	bio.tools
1402	LncDisPath	Information network model for Inferring disease and pathway associations of long non-coding RNAs	http://bdbl.nitc.ac.in/LncDisPath/index.html	Journal of Bioinformatics and Computational Biology	Genomics	RNA	2019	31617466	P V Sunil Kumar	sunilkumarpv@gmail.com	National Institute of Technology	Calicut	Kerala	Other	Functional	Prediction	NA
1407	VigSatDB	Genome-Wide Microsatellite DNA Marker Database of Three Species of Vigna for Germplasm Characterization and Improvement	http://webtom.cabgrid.res.in/vigna_ssr/	Database: The Journal of Biological Databases and Curation	Genomics	DNA	2019	31147679	Pramod Kumar Yadav	pramod.yadav@shiats.edu.in,	Sam Higginbottom University of Agriculture, Technology and Sciences	Allahabad	Uttar Pradesh	Other	Functional	Database	NA
1410	ESCC ATLAS	Facilitates the exploration and the analysis of genes among different populations	http://www.esccatlas.org	Scientific Reports	Genomics	DNA	2018	30143675	Prashantha Hebbar Manoj Kumar Kashyap	phebbar@mbiomics.org manojkkashyap@gmail.com	Manipal University	Manipal	Karnataka	Other	Functional	Database	NA
1412	TFIS	Tool for Detection of Transcription Factor Binding Sites	http://tfistool.appspot.com/	Interdisciplinary Sciences: Computational Life Sciences	Genomics	Other	2017	27052996	Priyanka Narad	pnarad@amity.edu	Amity University	Noida	Uttar Pradesh	Other	Functional	Prediction	NA
1414	OCDD	Investigate the genes associated with comorbidity	https://www.isical.ac.in/~systemsbiology/OCDD/home.php	Biodata Mining	Genomics	DNA	2017	29201145	Rajat K De	rajat@isical.ac.in	Indian Statistical Institute (ISI)	Kolkata	West Bengal	ISI	Functional	Database	NA
1415	CicaArVarDB	NP and InDel database for advancing genetics research and breeding applications in chickpea	http://cicarvardb.icrisat.org	Database: The Journal of Biological Databases and Curation	Genomics	Other	2015	26289427	Rajeev K Varshney	r.k.varshney@cgiar.org	International Crops Research Institute for the Semi-Arid Tropics (ICRISAT)	Hyderabad	Telangana	Other	Functional	Database	NA
1416	CicArMiSatDB	The chickpea microsatellite database	http://cicarmisatdb.icrisat.org	BMC Bioinformatics	Genomics	DNA	2014	24952649	Rajeev K Varshney	r.k.varshney@cgiar.org	International Crops Research Institute for the Semi-Arid Tropics (ICRISAT)	Hyderabad	Telangana	Other	Functional	Database	NA
1418	SMMRNA	A database of small molecule modulators of RNA	http://www.smmrna.org	Nucleic Acids Research	Genomics	RNA	2014	24163098	Raman Parkesh	rparkesh@imtech.res.in	CSIR - Institute of Microbial Technology (CSIR-IMTECH)	Chandigarh	Chandigarh	CSIR	Functional	Database	bio.tools
1425	DOR	A database of Olfactory Receptors - Integrated Repository for Sequence and Secondary Structural Information of Olfactory Receptors in Selected Eukaryotic Genomes	http://caps.ncbs.res.in/DOR	Bioinformatics and biology insights	Genomics	Other	2014	25002814	Ramanathan Sowdhamini	mini@ncbs.res.in	National Center for Biological Sciences (NCBS)	Bangalore	Karnataka	NCBS	Functional	Database	NA
1426	POEAS	Automated Plant Phenomic Analysis Using Plant Ontology	http://caps.ncbs.res.in/poeas/	Bioinformatics and biology insights	Genomics	Other	2014	25574136	Ramanathan Sowdhamini	mini@ncbs.res.in	National Center for Biological Sciences (NCBS)	Bangalore	Karnataka	NCBS	Functional	Prediction	NA
1427	STIFDB2	An updated version of plant stress-responsive transcription factor database with additional stress signals, stress-responsive transcription factor binding sites and stress-responsive genes in Arabidopsis and rice	http://caps.ncbs.res.in/stifdb2	Plant and cell physiology	Genomics	DNA	2013	23314754	Ramanathan Sowdhamini	mini@ncbs.res.in	National Center for Biological Sciences (NCBS)	Bangalore	Karnataka	NCBS	Functional	Database	NA
1430	Myosinome	A database of myosins from select eukaryotic genomes to facilitate analysis of sequence-structure-function relationships	http://caps.ncbs.res.in/myosinome	Bioinformatics and biology insights	Protein Structure Protein Function Genomics	DNA	2012	23189029	Ramanathan Sowdhamini	mini@ncbs.res.in	National Center for Biological Sciences (NCBS)	Bangalore	Karnataka	NCBS	Functional	Database	NA
1435	STIF	Identification of stress-upregulated transcription factor binding sites in Arabidopsis thaliana	http://caps.ncbs.res.in/download/stif	Bioinformation	Genomics	Other	2008	18841238	Ramanathan Sowdhamini	mini@ncbs.res.in	National Center for Biological Sciences (NCBS)	Bangalore	Karnataka	NCBS	Functional	Prediction	NA
1440	FMALIGN	Improvement of alignment accuracy utilizing sequentially conserved motifs	http://caps.ncbs.res.in/FMALIGN/Home.html	BMC Bioinformatics	Genomics	Other	2004	15509307	Ramanathan Sowdhamini	mini@ncbs.res.in	National Center for Biological Sciences (NCBS)	Bangalore	Karnataka	NCBS	Functional	Prediction	NA
1446	TIS Prediction	Prediction of translation initiation sites in human mRNA sequences with AUG start codon in weak Kozak context	http://bioinfo.iitk.ac.in/AUGPred/	Biochemical and biophysical research communications	Genomics	RNA	2008	18342624	Ramasubbu Sankararamakrishnan	rsankar@iitk.ac.in	Indian Institute of Technology (IIT K)	Kanpur	Uttar Pradesh	IIT	Functional	Prediction	NA
1451	FisOmics	Portal of fish genomic resources	http://mail.nbfgr.res.in/FisOmics/	Genomics	Genomics	DNA	2019	30611878	Ravindra Kumar	Ravindra.kumar1@icar.gov.in	ICAR - National Bureau of Fish Genetic Resources (NBFGR)	Lucknow	Uttar Pradesh	ICAR	Functional	Database	NA
1453	OpsiD	Tool for designing optimized siRNA	http://opsid.in/opsid/	Gene	Genomics	RNA	2015	25725126	Reena Murali	reena.rajesh@rit.ac.in	DBT - Rajiv Gandhi Centre for Biotechnology (RGCB)	Thiruvananthapuram	Kerala	DBT	Functional	Prediction	NA
1458	THGS	A web-based database of Transmembrane Helices in Genome Sequences	http:// pranag.physics.iisc.ernet.in/thgs/	Nucleic Acids Research	Genomics	Other	2004	14681375	S A Fernando	sekar@physics.iisc.ernet.in	Indian Institute of Science (IISc)	Bangalore	Karnataka	IISc	Functional	Database	Bioinformatics Software and Tools, BTISNet
1462	HaPYDive	Haplotype analysis of the polymorphic 17 YSTR markers in Kerala nontribal populations	http://portugene.com/hapydive.html	Molecular Biology Reports	Genomics	Other	2012	22311032	S. N. Parvathy	seemanairp@gmail.com	Sree Buddha College of Engineering	Padanilam	Kerala	Other	Functional	Database	NA
1468	MARome	A resource for annotation of Scaffold and Matrix Attachment Regions	http://196.1.114.46:8080/MARome/index	Nucleic Acids Research	Genomics	Other	2019	31265077	Samit Chattopadhyay Smriti Mittal Abhijeet Kul	abhijeet@bioinfo.net.in spmittal@unipune.ac.in samit@ii	University of Pune	Pune	Maharashtra	Other	Functional	Database	bio.tools
1469	wwPDB	Atomic co-ordinates and structure factors for I249T mutant of human CTSK (codes 5Z5O) have been deposited in the Protein Data Bank	http://wwpdb.org/	The FEBS journal	Protein Structure Genomics	Protein	2018	30199612	Sampa Biswas	sampa.sinp@gmail.com	Saha Institute of Nuclear Physics	Kolkata	West Bengal	Other	Functional	Database	NA
1470	GABD	Finding optimum width of discretization for gene expressions using functional annotations	http://www.sampa.droppages.com/GABD.html	Computers in biology and medicine	Genomics	DNA	2017	28941844	Sampa Misra	sampamisra1989@gmail.com	Indian Statistical Institute (ISI)	Kolkata	West Bengal	ISI	Functional	Prediction	NA
1471	PanGFR-HM	A Dynamic Web Resource for Pan-Genomic and Functional Profiling of Human Microbiome With Comparative Features	http://www.bioinfo.iicb.res.in/pangfr-hm/	Frontiers in Microbiology	Genomics	DNA	2018	30349509	Sandip Paul	sandippaul@iicb.res.in	CSIR - Indian Institute of Chemical Biology (CSIR-IICB)	Kolkata	West Bengal	CSIR	Functional	Database	NA
1474	miRT	A database of validated transcription start sites of human microRNAs	http://www.isical.ac.in/~bioinfo_miu/miRT/miRT.php	Genomics, Proteomics & Bioinformatics	Genomics	RNA	2012	23200141	Sanghamitra Bandyopadhyay	sanghami@isical.ac.in	Indian Statistical Institute (ISI)	Kolkata	West Bengal	ISI	Functional	Database	NA
1476	PHPT Registry	Primary hyperparathyroidism: insights from the Indian PHPT registry	http://www.indianphptregistry.com/	Journal of bone and mineral metabolism	Genomics	Other	2018	28364324	Sanjay Kumar Bhadada	bhadadask@rediffmail.com	Postgraduate Institute of Medical Education and Research (PGIMER)	Chandigarh	Chandigarh	Other	Functional	Prediction	NA
1481	MycopreonDB	A database of computationally identified operons and transcriptional units in Mycobacteria	http://www.cdfd.org.in/mycoperondb/index.html	BMC Bioinformatics	Genomics	DNA	2006	17254314	Sarita Ranjan	sarita@cdfd.org.in	CSIR - Centre for DNA Fingerprinting and Diagnostics (CSIR-CDFD)	Hyderabad	Telangana	CSIR	Functional	Database	NA
1486	AtFusionDB	Database of fusion transcripts in Arabidopsis thaliana	http://www.nipgr.res.in/AtFusionDB	Database: The Journal of Biological Databases and Curation	Genomics	DNA	2019	30624648	Shailesh Kumar	shailesh@nipgr.ac.in	DBT - National Institute of Plant Genome Research (NIPGR)	New Delhi	New Delhi	DBT	Functional	Database	bio.tools
1487	PVsiRNAdb	A database for plant exclusive virus-derived small interfering RNAs	http://www.nipgr.res.in/PVsiRNAdb	Database: The Journal of Biological Databases and Curation	Genomics	RNA	2018	30307523	Shailesh Kumar	shailesh@nipgr.ac.in	DBT - National Institute of Plant Genome Research (NIPGR)	New Delhi	New Delhi	DBT	Functional	Database	NA
1488	PlantPepDB	Database of plant peptides	http://www.nipgr.ac.in/PlantPepDB/	Scientific Reports	Genomics	Protein	2020	32042035	Shailesh Kumar	shailesh@nipgr.ac.in	DBT - National Institute of Plant Genome Research (NIPGR)	New Delhi	New Delhi	DBT	Functional	Database	NA
1489	CMBdb	A repository of omics data for cytomegalo virus	http://shaktisahislab.com/include/CMV/	Interdisciplinary Sciences	Genomics	Other	2019	31813095	Shakti Sahi	Shaktis@gbu.ac.in	Gautam Buddh University	Noida	Uttar Pradesh	Other	Functional	Database	bio.tools
1490	MMNDB	Mammalian Mitochondriaal ncRNA databsase	http://www.iitm.ac.in/bioinfo/mmndb/	Bioinformation	Genomics	RNA	2015	26912953	Shanmugam Anandakumar	bioinfoanand@gmail.com	Indian Institute of Technology (IITM)	Chennai	Tamil Nadu	IIT	Functional	Database	NA
1492	QuadBase2	Genome-wide database of G4 DNA--occurrence and conservation in human, chimpanzee, mouse and rat promoters and 146 microbes	http://quadbase.igib.res.in/	Nucleic Acids Research	Genomics	DNA	2008	17962308	Shantanu Chowdhury	shantanuc@igib.res.in	CSIR - Institute of Genomics and Integrative Biology (CSIR-IGIB)	New Delhi	New Delhi	CSIR	Functional	Database	NA
1494	piRNABank	A web resource on classified and clustered Piwi-interacting RNAs	http://pirnabank.ibab.ac.in/	Nucleic Acids Research	Genomics	RNA	2008	17881367	Shipra Agrawal	shipra@ibab.ac.in	Institute of Bioinformatics and Applied Biotechnology (IBAB)	Bangalore	Karnataka	IBAB	Functional	Database	NA
1495	PmiRExAt	Plant miRNA expression atlas database and web applications	http://pmirexat.nabi.res.in	PLOS One	Genomics	RNA	2016	27081157	Shrikant S Mantri	shrikant@nabi.res.in	DBT - National Agri Food Biotechnology Institute (NABI)	Mohali	Punjab	DBT	Functional	Database	NA
1496	SGD	Method for similarity measure for gene expressions using biological knowledge.	http://www.sampa.droppages.com/WPC.html	Gene	Genomics	DNA	2016	27688070	Shubhra SankarRay Sampa Misra	shubhra@isical.ac.in sampamisra1989@gmail.com	Indian Statistical Institute (ISI)	Kolkata	West Bengal	ISI	Functional	Prediction	bio.tools, Bioinformatics Software and Tools
1497	ILDgenDB	Facilitates graphical view of predicted DCGs-SNPs/miRNAs and literature associated DCGs-ILDs interactions for each ILD to facilitate efficient data interpretation. Outcomes of analyses suggested the significant involvement of immune system and defense mechanisms in ILDs pathogenesis.	http://14.139.240.55/ildgendb/index.php	Database: The Journal of Biological Databases and Curation	Genomics	RNA	2018	29897484	Smriti Mishra	smriti.mishra1906@gmail.com	Jaypee University of Information Technology (JUIT)	Solan	Himachal Pradesh	JUIT	Functional	Database	NA
1499	zf-lncRNApedia	A Comprehensive Online Resource for Zebrafish Long Non-Coding RNAs	http://genome.igib.res.in/zflncRNApedia/	PLOS One	Genomics	RNA	2015	26065909	Sridhar Sivasubbu Vinod Scaria	s.sivasubbu@igib.res.in vinods@igib.res.in	CSIR - Institute of Genomics and Integrative Biology (CSIR-IGIB)	New Delhi	New Delhi	CSIR	Functional	Prediction	NA