Browse result page of IndioBioDb
The total number entries retrieved from this search are 199
ID1241 | Resource NameECGPred | Resource DescriptionAnalsis of expresion data and correlation between gene expression and nucleotides composition of genes. | Resource Linkhttps://webs.iiitd.edu.in/raghava/ecgpred/ | JournalBMC Bioinformatics | ClassGenomics | SourceOther | Year of Publication2005 | PMID doi:10.2174/1875036200802010064 | Corresponding AuthorGajendra PS Raghava | Emailraghava@iiitd.ac.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryBTISNet |
ID1252 | Resource NameEGPred | Resource DescriptionPrediction of eukaryotic genes using ab initio methods after combining with sequence similarity approaches | Resource Linkhttp://www.imtech.res.in/raghava/egpred/ | JournalGenome research | ClassGenomics | SourceDNA | Year of Publication2004 | PMID 15342559 | Corresponding AuthorGajendra PS Raghava | Emailraghava@iiitd.ac.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryBTISNet |
ID1259 | Resource NameFTG | Resource DescriptionLocating probable protein coding region in nucleotide sequence using FFT based algorithm | Resource Linkhttp://crdd.osdd.net/raghava/ftg/ | JournalBioinformatics | ClassGenomics | SourceProtein | Year of Publication2002 | PMID 11836230 | Corresponding AuthorGajendra PS Raghava | Emailraghava@iiitd.ac.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryBTISNet |
ID1265 | Resource NameCancerLivER | Resource DescriptionA database of liver cancer gene expression and biomarkers | Resource Linkhttp://webs.iiitd.edu.in/raghava/cancerliver/ | JournalDatabase: The Journal of Biological Databases and Curation | ClassGenomics | SourceOther | Year of Publication2020 | PMID 32147717 | Corresponding AuthorGajendra PS Raghava | Emailraghava@iiitd.ac.in | InstituteIndraprastha Institute of Information Technology (IIITD) | CityNew Delhi | StateNew Delhi | Functional StatusIIIT | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1268 | Resource NameCRCRpred | Resource DescriptionRisk score prediction of colorectal cancer from the proteins involved in mitochondrial apoptotic pathway | Resource Linkhttp://webs.iiitd.edu.in/raghava/sambinder/ | JournalPLOS One | ClassGenomics | SourceProtein | Year of Publication2019 | PMID 31498794 | Corresponding AuthorGajendra PS Raghava | Emailraghava@iiitd.ac.in | InstituteIndraprastha Institute of Information Technology (IIITD) | CityNew Delhi | StateNew Delhi | Functional StatusIIIT | Funding AgencyFunctional | Resource categoryPrediction | Other Repositorybio.tools |
ID1269 | Resource NameCancerSPP | Resource DescriptionPrediction of skin cutaneous melanoma using genomics profile | Resource Linkhttps://webs.iiitd.edu.in/raghava/cancerspp/ | JournalScientific Reports | ClassGenomics | SourceOther | Year of Publication2019 | PMID 31673075 | Corresponding AuthorGajendra PS Raghava | Emailraghava@iiitd.ac.in | InstituteIndraprastha Institute of Information Technology (IIITD) | CityNew Delhi | StateNew Delhi | Functional StatusIIIT | Funding AgencyFunctional | Resource categoryDatabase | Other Repositorybio.tools |
ID1270 | Resource NameHCCpred | Resource DescriptionMethod for Biomarker identification for hepatocellular carcinoma | Resource Linkhttps://webs.iiitd.edu.in/raghava/cancerspp/ | JournalFrontiers in Genetics | ClassGenomics | SourceOther | Year of Publication2020 | PMID 31998366 | Corresponding AuthorGajendra PS Raghava | Emailraghava@iiitd.ac.in | InstituteIndraprastha Institute of Information Technology (IIITD) | CityNew Delhi | StateNew Delhi | Functional StatusIIIT | Funding AgencyFunctional | Resource categoryPrediction | Other Repositorybio.tools |
ID1276 | Resource NameHGEx-ERdb | Resource DescriptionA revisit to functional genomics studies on human endometrium and creation of HGEx-ERdb | Resource Linkhttp://resource.ibab.ac.in/HGEx-ERdb/ | JournalPLOS One | ClassGenomics | SourceDNA | Year of Publication2013 | PMID 23555582 | Corresponding AuthorGeetanjali Sachdeva | Emailsachdevag@nirrh.res.in | InstituteICMR - National Institute for Research in Reproductive Health (NIRRH) | CityMumbai | StateMaharashtra | Functional StatusICMR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1281 | Resource NameCoffee Genome Hub | Resource DescriptionIt had 22 matches to different pectate lyase genes mapped on 9 of the 11 pseudochromosomes, the top match being Cc07_g00190 Pectate lyase | Resource Linkhttp://coffee-genome.org/ | Journal3 Biotech | ClassGenomics | SourceDNA | Year of Publication2017 | PMID 28444590 | Corresponding AuthorH L Sreenath | Emailsreenath.lakkanna@gmail.com | InstituteCentral Coffee Research Institute (CCRI) | CityMysore | StateKarnataka | Functional StatusOther | Funding AgencyFunctional | Resource categoryDatabase | Other Repositorybio.tools |
ID1284 | Resource NameMICdb3.0 | Resource DescriptionA comprehensive resource of microsatellite repeats from prokaryotic genomes | Resource Linkhttp://www.cdfd.org.in/micas | JournalDatabase: The Journal of Biological Databases and Curation | ClassGenomics | SourceDNA | Year of Publication2014 | PMID 24536078 | Corresponding AuthorHampapathalu A Nagarajaram | Emailhan@cdfd.org.in | InstituteGrandhi Varalakshmi Venkatarao Institute of Technology | CityBhimavaram | StateAndhra Pradesh | Functional StatusOther | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1285 | Resource NameIMEx | Resource DescriptionImperfect Microsatellite Extractor | Resource Linkhttp://43.227.129.132:8008/IMEX/ | JournalBioinformatics | ClassGenomics | SourceDNA | Year of Publication2007 | PMID 17379689 | Corresponding AuthorHampapathalu A Nagarajaram | Emailhan@cdfd.org.in | InstituteCSIR - Centre for DNA Fingerprinting and Diagnostics (CSIR-CDFD) | CityHyderabad | StateTelangana | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryPrediction | Other Repositorybio.tools |
ID1286 | Resource NameMICAS | Resource DescriptionDatabase of prokaryotic microsatellites | Resource Linkhttp://www.cdfd.org.in/micas | JournalNucleic Acids Research | ClassGenomics | SourceDNA | Year of Publication2003 | PMID 12519959 | Corresponding AuthorHampapathalu A Nagarajaram | Emailhan@cdfd.org.in | InstituteCSIR - Centre for DNA Fingerprinting and Diagnostics (CSIR-CDFD) | CityHyderabad | StateTelangana | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1287 | Resource NamematK-QR classifier | Resource DescriptionA patterns based approach for plant species identification | Resource Linkhttp://www.neeri.res.in/matk_classifier/index.htm | JournalBiodata Mining | ClassGenomics | SourceOther | Year of Publication2015 | PMID 27990177 | Corresponding AuthorHemant J Purohit | Emailhj_purohit@neeri.res.in | InstituteCSIR - National Environmental Engineering Research Institute (CSIR-NEERI) | CityNagpur | StateMaharashtra | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1288 | Resource NameCSIdesigner | Resource DescriptionAn siRNA designing tool with a unique functional off:target filtering approach | Resource Linkhttp://gyanxet-beta.com/ | JournalJournal of biomolecular structure and dynamics | ClassGenomics | SourceRNA | Year of Publication2012 | PMID 23140209 | Corresponding AuthorJ Chakrabarti | Emailj.chakrabarti@gyanxet.com | InstituteIndian Association for the Cultivation of Science (IACS) | CityKolkata | StateWest Bengal | Functional StatusIACS | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1289 | Resource NameWildSilkbase | Resource DescriptionAn EST database of wild silkmoths | Resource Linkhttp://www.cdfd.org.in/wildsilkbase/ | JournalBMC Genomics | ClassGenomics | SourceOther | Year of Publication2008 | PMID 18637161 | Corresponding AuthorJ Nagaraju | Emailjnagaraju@cdfd.org.in | InstituteCSIR - Centre for DNA Fingerprinting and Diagnostics (CSIR-CDFD) | CityHyderabad | StateTelangana | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1291 | Resource NameANGDelMut | Resource DescriptionA web-based tool for predicting and analyzing functional loss mechanisms of amyotrophic lateral sclerosis:associated angiogenin mutations | Resource Linkhttp://bioschool.iitd.ernet.in/DelMut/ | JournalF1000 research | ClassGenomics Vaccinomics | SourceOther | Year of Publication2013 | PMID 24555108 | Corresponding AuthorJames Gomes | Emailjgomes@bioschool.iitd.ac.in | InstituteIndian Institute of Technology (IIT D) | CityNew Delhi | StateNew Delhi | Functional StatusIIT | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1292 | Resource NameFMIMS | Resource DescriptionIdentifying relevant group of miRNAs in cancer using fuzzy mutual information | Resource Linkhttp://www.jayanta.droppages.com/FMIMS.html | JournalMedical & biological engineering& computation | ClassGenomics | SourceRNA | Year of Publication2016 | PMID 26264058 | Corresponding AuthorJayanta Kumar Pal | Emailjkp_it08@yahoo.com | InstituteIndian Statistical Institute (ISI) | CityKolkata | StateWest Bengal | Functional StatusISI | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1293 | Resource NameLeptoDB | Resource DescriptionLeptoDB facilitates well-structured knowledge of genomics, proteomics and therapeutic aspects with more than 500 assemblies including 17 complete and 496 draft genomes encoding 1.7 million proteins for 23 Leptospira species with more than 250 serovars comprising pathogenic, intermediate and saprophytic strains | Resource Linkhttp://leptonet.org.in | JournalDatabase: The Journal of Biological Databases and Curation | ClassGenomics Vaccinomics | SourceProtein | Year of Publication2018 | PMID 29905762 | Corresponding AuthorJayashankar Das | Emailjayshankardas@gmail.com | InstituteGujarat Biotechnology Research Centre | CityGandhinagar | StateGujrat | Functional StatusOther | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1294 | Resource NameDBDiaSNP | Resource DescriptionAn Open-Source Knowledgebase of Genetic Polymorphisms and Resistance Genes Related to Diarrheal Pathogens | Resource Linkhttp://www.juit.ac.in/attachments/dbdiasnp/ | JournalOmics | ClassCheminformatics Genomics | SourceDNA | Year of Publication2015 | PMID 25978092 | Corresponding AuthorJayashree Ramana | Emailjayashree.ramana@juit.ac.in | InstituteJaypee University of Information Technology (JUIT) | CitySolan | StateHimachal Pradesh | Functional StatusJUIT | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1295 | Resource NameRCDB | Resource DescriptionRenal Cancer Gene Database | Resource Linkhttp://www.juit.ac.in/attachments/jsr/rcdb/homenew.html | JournalBMC Research Notes | ClassGenomics Vaccinomics | SourceDNA | Year of Publication2012 | PMID 22608002 | Corresponding AuthorJayashree Ramana | Emailjayashree.ramana@juit.ac.in | InstituteJaypee University of Information Technology (JUIT) | CitySolan | StateHimachal Pradesh | Functional StatusJUIT | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1297 | Resource NamelnCeDB | Resource DescriptionDatabase of human long noncoding RNA acting as competing endogenous RNA | Resource Linkhttp://gyanxet-beta.com/lncedb/ | JournalPLOS One | ClassGenomics | SourceRNA | Year of Publication2014 | PMID 24926662 | Corresponding AuthorJayprokas Chakrabarti | Emailj.chakrabarti@gyanxet.com | InstituteIndian Association for the Cultivation of Science (IACS) | CityKolkata | StateWest Bengal | Functional StatusIACS | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1299 | Resource NameCirc2Traits | Resource DescriptionA comprehensive database for circular RNA potentially associated with disease and traits | Resource Linkhttp://gyanxet-beta.com/circdb/ | JournalFrontiers in genetics | ClassGenomics Vaccinomics | SourceRNA | Year of Publication2013 | PMID 24339831 | Corresponding AuthorJayprokas Chakrabarti | Emailj.chakrabarti@gyanxet.com | InstituteIndian Association for the Cultivation of Science (IACS) | CityKolkata | StateWest Bengal | Functional StatusIACS | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1303 | Resource NameGlaucoma Pred | Resource DescriptionGlaucoma prediction based on Myocilin genotype and phenotype information | Resource Linkhttp://bioserver1.physics.iisc.ac.in/myocilin | JournalGenomics | ClassGenomics | SourceOther | Year of Publication2018 | PMID 29665417 | Corresponding AuthorK Sekar | Emailsekar@iisc.ac.in | InstituteIndian Institute of Science (IISc) | CityBangalore | StateKarnataka | Functional StatusIISc | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1307 | Resource NameSEM | Resource DescriptionA web based GUI to generate and visualize the macromolecules | Resource Linkhttp://dicsoft2.physics.iisc.ernet.in/sem/ | JournalNucleic Acids Research | ClassGenomics | SourceOther | Year of Publication2003 | PMID 12824326 | Corresponding AuthorK Sekar | Emailsekar@physics.iisc.ernet.in | InstituteIndian Institute of Science (IISc) | CityBangalore | StateKarnataka | Functional StatusIISc | Funding AgencyFunctional | Resource categoryPrediction | Other Repositorybio.tools, BTISNet |
ID1310 | Resource NameJunker | Resource DescriptionAn intergenic explorer for bacterial genomes | Resource Linkhttp://pranag.physics.iisc.ernet.in/junker/ | JournalGenomics, Proteomics & Bioinformatics | ClassGenomics | SourceDNA | Year of Publication2011 | PMID 22196361 | Corresponding AuthorK Sekar | Emailsekar@physics.iisc.ernet.in | InstituteIndian Institute of Science (IISc) | CityBangalore | StateKarnataka | Functional StatusIISc | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1311 | Resource NameFAIR | Resource DescriptionA server for internal sequence repeats | Resource Linkhttp://bioserver1.physics.iisc.ernet.in/fair/ | JournalBioinformation | ClassGenomics | SourceDNA | Year of Publication2010 | PMID 20978598 | Corresponding AuthorK Sekar | Emailsekar@physics.iisc.ernet.in | InstituteIndian Institute of Science (IISc) | CityBangalore | StateKarnataka | Functional StatusIISc | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1313 | Resource NameRepEx | Resource DescriptionA method for repeat extraction | Resource Linkhttp://bioserver2.physics.iisc.ac.in/RepEx/ | JournalComputational Biology and Chemistry | ClassGenomics | SourceOther | Year of Publication2019 | PMID 30598392 | Corresponding AuthorK Sekar | Emailsekar@iisc.ac.in | InstituteIndian Institute of Science (IISc) | CityBangalore | StateKarnataka | Functional StatusIISc | Funding AgencyFunctional | Resource categoryPrediction | Other Repositorybio.tools |
ID1316 | Resource Name1-CMDb | Resource DescriptionPlatform to interrogate its association with a host of human disorders | Resource Linkhttp://slsdb.manipal.edu/ocm | JournalPublic health genomics | ClassGenomics | SourceOther | Year of Publication2017 | PMID 28511181 | Corresponding AuthorKapaettu Satyamoorthy | Emailksatyamoorthy@manipal.edu | InstituteManipal University | CityManipal | StateKarnataka | Functional StatusOther | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1320 | Resource NameGREAM | Resource DescriptionA Web Server to Short-List Potentially Important Genomic Repeat Elements Based on Over-/Under-Representation in Specific Chromosomal Locations, Such as the Gene Neighborhoods, within or across 17 Mammalian Species | Resource Linkhttp://resource.ibab.ac.in/GREAM/ | JournalPLOS One | ClassGenomics | SourceDNA | Year of Publication2015 | PMID 26208093 | Corresponding AuthorKshitish K Acharya | Emailkshitish@ibab.ac.in | InstituteInstitute of Bioinformatics and Applied Biotechnology (IBAB) | CityBangalore | StateKarnataka | Functional StatusIBAB | Funding AgencyFunctional | Resource categoryPrediction | Other Repositorybio.tools |
ID1321 | Resource NameTIPMaP | Resource DescriptionA web server to establish transcript isoform profiles from reliable microarray probes | Resource Linkhttp://resource.ibab.ac.in/TIPMaP | JournalBMC Genomics | ClassGenomics | SourceOther | Year of Publication2013 | PMID 24373374 | Corresponding AuthorKshitish K Acharya | Emailkshitish@ibab.ac.in | InstituteInstitute of Bioinformatics and Applied Biotechnology (IBAB) | CityBangalore | StateKarnataka | Functional StatusIBAB | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1322 | Resource NameMGEx-Udb | Resource DescriptionA mammalian uterus database for expression-based cataloguing of genes across conditions, including endometriosis and cervical cancer | Resource Linkhttp://resource.ibab.ac.in/MGEx-Udb/ | JournalPLOS One | ClassGenomics | SourceDNA | Year of Publication2012 | PMID 22606288 | Corresponding AuthorKshitish K Acharya | Emailkshitish@ibab.ac.in | InstituteInstitute of Bioinformatics and Applied Biotechnology (IBAB) | CityBangalore | StateKarnataka | Functional StatusIBAB | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1323 | Resource NameMGEx-Tdb | Resource DescriptionA novel tissue-specific meta-analysis approach for gene expression predictions, initiated with a mammalian gene expression testis database | Resource Linkhttp://resource.ibab.ac.in/MGEx-Tdb/ | JournalBMC Genomics | ClassGenomics | SourceDNA | Year of Publication2010 | PMID 20699007 | Corresponding AuthorKshitish K Acharya | Emailkshitish@ibab.ac.in | InstituteInstitute of Bioinformatics and Applied Biotechnology (IBAB) | CityBangalore | StateKarnataka | Functional StatusIBAB | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1325 | Resource NameIGDD | Resource DescriptionIndian genetic disease database | Resource Linkhttp://www.igdd.iicb.res.in | JournalNucleic Acids Research | ClassGenomics | SourceDNA | Year of Publication2011 | PMID 21037256 | Corresponding AuthorKunal Ray | Emailkunalray@gmail.com | InstituteCSIR - Indian Institute of Chemical Biology (CSIR-IICB) | CityKolkata | StateWest Bengal | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other Repositorybio.tools |
ID1326 | Resource NameNPLB | Resource DescriptionLearn de novo promoter architectures from genome-wide transcription start sites | Resource Linkhttps://github.com/NarlikarLab/NPLB | JournalBioinformatics | ClassGenomics | SourceDNA | Year of Publication2016 | PMID 26530723 | Corresponding AuthorLeelavati Narlikar | Emaill.narlikar@ncl.res.in | InstituteCSIR - National Chemical Laboratory (CSIR-NCL) | CityPune | StateMaharashtra | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1327 | Resource NameOncomiRdbB | Resource DescriptionA comprehensive database of microRNAs and their targets in breast cancer | Resource Linkhttp://tdb.ccmb.res.in/OncomiRdbB/index.htm | JournalBMC Bioinformatics | ClassGenomics Vaccinomics | SourceRNA | Year of Publication2014 | PMID 24428888 | Corresponding AuthorLekha Dinesh Kumar | Emaillekha@ccmb.res.in | InstituteCSIR - Centre for Cellular and Molecular Biology (CSIR-CCMB) | CityHyderabad | StateTelangana | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1328 | Resource NameLeukmiR | Resource DescriptionA database for miRNAs and their targets in Acute Lymphoblastic Leukemia | Resource Linkhttp://tdb.ccmb.res.in/LeukmiR/ | JournalDatabase: The Journal of Biological Databases and Curation | ClassGenomics | SourceOther | Year of Publication2020 | PMID 32128558 | Corresponding AuthorLekha Dinesh Kumar | Emaillekha@ccmb.res.in | InstituteCSIR - Centre for Cellular and Molecular Biology (CSIR-CCMB) | CityHyderabad | StateTelangana | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1330 | Resource NameSilkSatDb | Resource DescriptionA microsatellite database of the silkworm, Bombyx mori | Resource Linkhttp://www.cdfd.org.in/silksatdb | JournalNucleic Acids Research | ClassGenomics | SourceDNA | Year of Publication2005 | PMID 15608226 | Corresponding AuthorM D Prasad | Emailjnagaraju@cdfd.org.in | InstituteCSIR - Centre for DNA Fingerprinting and Diagnostics (CSIR-CDFD) | CityHyderabad | StateTelangana | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1331 | Resource NameCREMOFAC | Resource DescriptionA database of chromatin remodeling factors | Resource Linkhttp://www.jncasr.ac.in/cremofac/ | JournalBioinformatics | ClassGenomics | SourceDNA | Year of Publication2006 | PMID 17021159 | Corresponding AuthorM R S Rao | Emailmrsrao@jncasr.ac.in | InstituteJawaharlal Nehru Centre for Advanced Scientific Research (JNCASR) | CityBangalore | StateKarnataka | Functional StatusOther | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1337 | Resource NameLeishMicrosatDB | Resource DescriptionOpen source database of repeat sequences detected in six fully sequenced Leishmania genomes | Resource Linkhttp://biomedinformri.com/leishmicrosat | JournalDatabase: The Journal of Biological Databases and Curation | ClassGenomics | SourceDNA | Year of Publication2014 | PMID 25125444 | Corresponding AuthorManas R Dikhit | Emailmanasranjandikhit@gmail.com | InstituteICMR - Rajendra Memorial Research Institute of Medical Sciences (RMRIMS) | CityPatna | StateBihar | Functional StatusICMR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1338 | Resource NamePromBase | Resource DescriptionA web resource for various genomic features and predicted promoters in prokaryotic genomes | Resource Linkhttp://nucleix.mbu.iisc.ernet.in/prombase/ | JournalBMC Research Notes | ClassGenomics | SourceDNA | Year of Publication2011 | PMID 21781326 | Corresponding AuthorManju Bansal | Emailmb@mbu.iisc.ernet.in | InstituteIndian Institute of Science (IISc) | CityBangalore | StateKarnataka | Functional StatusIISc | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1343 | Resource NamesaRNAdb | Resource DescriptionContains 2150 manually curated saRNA entries with detailed information about their nucleotide sequences, activities, corresponding target gene, promoter and other experimental data. Besides, saRNA-promoter binding location, predicted saRNA features, tools (off-target, map) and RNAa-related proteins with their interacting partners are provided | Resource Linkhttp://bioinfo.imtech.res.in/manojk/sarna/ebb.php | JournalJournal of molecular biology | ClassGenomics | SourceRNA | Year of Publication2018 | PMID 29625201 | Corresponding AuthorManoj Kumar | Emailmanojk@imtech.res.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1345 | Resource NameASPsiRNA | Resource DescriptionA Resource of ASP-siRNAs Having Therapeutic Potential for Human Genetic Disorders and Algorithm for Prediction of Their Inhibitory Efficacy | Resource Linkhttp://crdd.osdd.net/servers/aspsirna/ | JournalG3 bethesda | ClassGenomics | SourceRNA | Year of Publication2017 | PMID 28696921 | Corresponding AuthorManoj Kumar | Emailmanojk@imtech.res.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1347 | Resource NamesiRNAmod | Resource DescriptionDatabase of experimentally validated chemically modified siRNAs | Resource Linkhttp://crdd.osdd.net/servers/sirnamod | JournalScientific Reports | ClassGenomics | SourceRNA | Year of Publication2016 | PMID 26818131 | Corresponding AuthorManoj Kumar | Emailmanojk@imtech.res.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1348 | Resource Namege-CRISPR | Resource DescriptionAn integrated pipeline for the prediction and analysis of sgRNAs genome editing efficiency for CRISPR/Cas system | Resource Linkhttp://bioinfo.imtech.res.in/manojk/gecrispr/ | JournalScientific Reports | ClassGenomics | SourceRNA | Year of Publication2016 | PMID 27581337 | Corresponding AuthorManoj Kumar | Emailmanojk@imtech.res.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1349 | Resource NameSMEpred | Resource DescriptionWebserver will be useful to scientific community engaged in use of RNAi-based technology as well as for therapeutic development | Resource Linkhttp://bioinfo.imtech.res.in/manojk/smepred | JournalRNA biology (Taylor and Francic Group) | ClassGenomics | SourceRNA | Year of Publication2016 | PMID 27603513 | Corresponding AuthorManoj Kumar | Emailmanojk@imtech.res.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1353 | Resource NameVIRmiRNA | Resource DescriptionComprehensive resource for experimentally validated viral miRNAs and their targets | Resource Linkhttp://crdd.osdd.net/servers/virmirna | JournalDatabase: The Journal of Biological Databases and Curation | ClassGenomics | SourceRNA | Year of Publication2014 | PMID 25380780 | Corresponding AuthorManoj Kumar | Emailmanojk@imtech.res.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1355 | Resource NameVIRsiRNApred | Resource DescriptionA web server for predicting inhibition efficacy of siRNAs targeting human viruses | Resource Linkhttp://crdd.osdd.net/servers/virsirnapred/ | JournalJournal of Translational Medicine | ClassGenomics | SourceRNA | Year of Publication2013 | PMID 24330765 | Corresponding AuthorManoj Kumar | Emailmanojk@imtech.res.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |
ID1356 | Resource NameVIRsiRNAdb | Resource DescriptionA curated database of experimentally validated viral siRNA/shRNA | Resource Linkhttp://crdd.osdd.net/servers/virsirnadb | JournalNucleic Acids Research | ClassGenomics | SourceRNA | Year of Publication2012 | PMID 22139916 | Corresponding AuthorManoj Kumar | Emailmanojk@imtech.res.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other Repositorybio.tools |
ID1358 | Resource NameHIVsirDB | Resource DescriptionA database of HIV inhibiting siRNAs | Resource Linkhttp://crdd.osdd.net/raghava/hivsir/ | JournalPLOS One | ClassGenomics | SourceRNA | Year of Publication2011 | PMID 22022467 | Corresponding AuthorManoj Kumar | Emailmanojk@imtech.res.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryDatabase | Other RepositoryNA |
ID1359 | Resource NameHPVbase | Resource DescriptionA knowledgebase of viral integrations, methylation patterns and microRNAs aberrant expression: As potential biomarkers for Human papillomaviruses mediated carcinomas | Resource Linkhttp://crdd.osdd.net/servers/hpvbase/ | JournalScientific Reports | ClassGenomics | SourceRNA | Year of Publication2015 | PMID 26205472 | Corresponding AuthorManoj Kumar | Emailmanojk@imtech.res.in | InstituteCSIR - Institute of Microbial Technology (CSIR-IMTECH) | CityChandigarh | StateChandigarh | Functional StatusCSIR | Funding AgencyFunctional | Resource categoryPrediction | Other RepositoryNA |