Browse result page of IndioBioDb
The total number entries retrieved from this search are 45
ID | Resource Name | Resource Description | Resource Link | Journal | Class | Source | Year of Publication | PMID | Corresponding Author | Institute | City | State | Functional Status | Funding Agency | Resource category | Other Repository | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1004 | iAMPred | Predicting antimicrobial peptides with improved accuracy by incorporating the compositional, physico-chemical and structural features into Chou's general PseAAC | http://cabgrid.res.in:8080/amppred/ | Scientific Reports | BioDrug | Protein | 2017 | 28205576 | A R Rao | rao.cshl.work@gmail.com | ICAR - Indian Agricultural Statistics Research Institute (IASRI) | New Delhi | New Delhi | ICAR | Functional | Prediction | NA |
1011 | HRGPrered | Prediction of herbicide resistant genes with k-mer nucleotide compositional features and support vector machine | http://cabgrid.res.in:8080/hrgpred/ | Scientific Reports | BioDrug | DNA | 2019 | 30692561 | A R Rao | ar.rao@icar.gov.in | ICAR - Indian Agricultural Statistics Research Institute (IASRI) | New Delhi | New Delhi | ICAR | Functional | Prediction | NA |
1030 | G4IPDB | Database that contains detailed information about proteins interacting with nucleic acids that forms G-quadruplex structures | http://bsbe.iiti.ac.in/bsbe/ipdb/index.php | Scientific Reports | Interactome | Protein | 2016 | 27905517 | Amit Kumar | amitk@iiti.ac.in | Indian Institute of Technology (IIT I) | Indore | Madhya Pradesh | IIT | Functional | Database | NA |
1038 | dPABBs | A Novel in silico Approach for Predicting and Designing Anti-biofilm Peptides | http://ab-openlab.csir.res.in/abp/antibiofilm/ | Scientific Reports | BioDrug | Protein | 2016 | 26912180 | Anshu Bhardwaj | anshub@osdd.net | CSIR - Open Source Drug Discovery Unit (CSIR-OSDD) | New Delhi | New Delhi | CSIR | Functional | Prediction | NA |
1042 | TM-Aligner | Based on Wu-Manber and dynamic string matching algorithm which has significantly improved its accuracy and speed of multiple sequence alignment | http://lms.snu.edu.in/TM-Aligner/ | Scientific Reports | Protein Function | DNA | 2017 | 28970546 | Ashutosh Singh | ashutosh.singh@snu.edu.in | Shiv Nadar University Greater | Noida | Uttar Pradesh | Other | Functional | Database | NA |
1059 | ImmtorLig_DB | Repertoire of virtually screened small molecules against immune receptors to bolster host immunity | http://bioinfo.imtech.res.in/bvs/immtor/ | Scientific Reports | Cheminformatics Vaccinomics | Other | 2019 | 30816123 | Balvinder Singh Javed N Agrewala | bvs@imtech.res.in jagrewala@iitrpr.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) Indian Institute of Technology Ropar (IIT RPR) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1082 | PAmiRDB | Resource for plant miRNAs targeting viruses | http://bioinfo.icgeb.res.in/pamirdb | Scientific Reports | Genomics | RNA | 2019 | 30874591 | Dinesh Gupta | dinesh@icgeb.res.in | DBT - International Centre for Genetic Engineering and Biotechnology (ICGEB) | New Delhi | New Delhi | DBT | Functional | Database | NA |
1083 | APA | A gene expression dataset analysis tool for identification and prioritization of differentially regulated and network rewired pathways | http://bioinfo.icgeb.res.in/APA/ | Scientific Reports | Interactome | Other | 2017 | 28084397 | Dinesh Gupta | dinesh@icgeb.res.in | DBT - International Centre for Genetic Engineering and Biotechnology (ICGEB) | New Delhi | New Delhi | DBT | Functional | Prediction | NA |
1092 | Duct-BRCA-CSP | Prediction method foe invasive ductal carcinoma progression based on gene expression data | http://bioinfo.icgeb.res.in/duct-BRCA-CSP | Scientific Reports | Genomics | RNA | 2020 | 32139710 | Dinesh Gupta | dinesh@icgeb.res.in | DBT - International Centre for Genetic Engineering and Biotechnology (ICGEB) | New Delhi | New Delhi | DBT | Functional | Prediction | NA |
1096 | TamiRPred | Development of species specific putative miRNA and its target prediction tool in wheat | http://webtom.cabgrid.res.in/tamirpred | Scientific Reports | Genomics | RNA | 2019 | 30846812 | Dinesh Kumar | dinesh.kumar@icar.gov.in | ICAR - Indian Council of Agricultural Research | New Delhi | New Delhi | ICAR | Functional | Prediction | NA |
1103 | MiSNPDb | A Web-Based Genomic Resources of Tropical Ecology Fruit Mango (Mangifera Indica L.) for Phylogeography and Varietal Differentiation | http://webtom.cabgrid.res.in/mangosnps/ | Scientific Reports | Genomics | Other | 2017 | 29097776 | Dinesh Kumar | dinesh.kumar@icar.gov.in | ICAR - Indian Council of Agricultural Research | New Delhi | New Delhi | ICAR | Functional | Database | NA |
1126 | IL10pred | Prediction of Interleukin-10 inducing peptides | http://webs.iiitd.edu.in/raghava/il10pred/ | Scientific Reports | BioDrug | Protein | 2017 | 28211521 | Gajendra PS Raghava | raghava@iiitd.ac.in | Indraprastha Institute of Information Technology (IIITD) | New Delhi | New Delhi | IIIT | Functional | Prediction | NA |
1127 | CancerCSP | Gene expression-based biomarkers for discriminating early and late stage of clear cell renal cancer | http://webs.iiitd.edu.in/raghava/cancercsp/ | Scientific Reports | Genomics | DNA | 2017 | 28349958 | Gajendra PS Raghava | raghava@iiitd.ac.in | Indraprastha Institute of Information Technology (IIITD) | New Delhi | New Delhi | IIIT | Functional | Prediction | NA |
1128 | CancerPDF | Comprehensive database of endogenous peptides detected in the human biofluids | http://webs.iiitd.edu.in/raghava/cancerpdf/ | Scientific Reports | BioDrug | Protein | 2017 | 28473704 | Gajendra PS Raghava | raghava@iiitd.ac.in | Indraprastha Institute of Information Technology (IIITD) | New Delhi | New Delhi | IIIT | Functional | Database | NA |
1132 | dbEM | A database of epigenetic modifiers curated from cancerous and normal genomes | http://webs.iiitd.edu.in/raghava/dbem/# | Scientific Reports | Genomics | DNA | 2016 | 26777304 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1135 | imRNA | Prediction of Immunomodulatory potential of an RNA sequence for designing non-toxic siRNAs and RNA-based vaccine adjuvants | http://webs.iiitd.edu.in/raghava/imrna/ | Scientific Reports | Vaccinomics | RNA | 2016 | 26861761 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1136 | ApoCanD | Database of human apoptotic proteins in the context of cancer | http://webs.iiitd.edu.in/raghava/apocand/ | Scientific Reports | Cheminformatics | Protein | 2016 | 26861916 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1137 | HemoPI | Prediction and virtual screening of hemolytic peptides | http://webs.iiitd.edu.in/raghava/hemopi/ | Scientific Reports | BioDrug | Protein | 2016 | 26953092 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools, BTISNet |
1139 | CancerDP | Prioritization of anticancer drugs against a cancer using genomic features of cancer cells | http://webs.iiitd.edu.in/raghava/cancerdp/ | Scientific Reports | Cheminformatics Vaccinomics | DNA | 2016 | 27030518 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | NA |
1141 | EbolaVCR | A web-based resource for designing therapeutics against Ebola Virus | http://crdd.osdd.net/oscadd/ebola/ | Scientific Reports | Vaccinomics | Other | 2016 | 27113850 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1143 | ZikaVR | An integrated Zika virus resource for genomics,proteomics,phylogenetic and therapeutic analysis | http://bioinfo.imtech.res.in/manojk/zikavr/ | Scientific Reports | Vaccinomics | Other | 2016 | 27633273 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1144 | PEPlife | Manually curated resource of experimentally determined half-life of peptides. PEPlife contains 2229 entries covering 1193 unique peptides | http://webs.iiitd.edu.in/raghava/peplife/ | Scientific Reports | BioDrug | Protein | 2016 | 27819351 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | BTISNet |
1153 | VaccineDA | Prediction, design and genome-wide screening of oligodeoxynucleotide-based vaccine adjuvants | http://webs.iiitd.edu.in/raghava/vaccineda/ | Scientific Reports | Vaccinomics | Other | 2015 | 26212482 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1154 | AHTpin | Designing and virtual screening of antihypertensive peptides | http://webs.iiitd.edu.in/raghava/ahtpin/ | Scientific Reports | BioDrug | Protein | 2015 | 26213115 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1156 | PCMdb | Pancreatic cancer methylation database | http://webs.iiitd.edu.in/raghava/pcmdb/ | Scientific Reports | Genomics | Other | 2014 | 24569397 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1160 | HerceptinR | Information about assays performend to test sensitivity/resistance of Herceptin Antibodies | http://webs.iiitd.edu.in/raghava/herceptinr/ | Scientific Reports | Vaccinomics | Protein | 2014 | 24670875 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1161 | DiPCell | Designing of inhibitors against pancreatic cancer cell lines. | http://webs.iiitd.edu.in/raghava/dipcell/ | Scientific Reports | Cheminformatics Vaccinomics | Other | 2014 | 24728108 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1167 | CancerDR | Cancer drug resistance database | http://webs.iiitd.edu.in/raghava/cancerdr/ | Scientific Reports | Genomics BioDrug | Other | 2013 | 23486013 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1170 | TumorHPD | Computational approach for designing tumor homing peptides | http://webs.iiitd.edu.in/raghava/tumorhpd/ | Scientific Reports | BioDrug | Protein | 2013 | 23558316 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | BTISNet |
1175 | AntiCP | In silico models for designing and discovering novel anticancer peptides | http://webs.iiitd.edu.in/raghava/anticp/ | Scientific Reports | BioDrug | Protein | 2013 | 24136089 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools, BTISNet |
1269 | CancerSPP | Prediction of skin cutaneous melanoma using genomics profile | https://webs.iiitd.edu.in/raghava/cancerspp/ | Scientific Reports | Genomics | Other | 2019 | 31673075 | Gajendra PS Raghava | raghava@iiitd.ac.in | Indraprastha Institute of Information Technology (IIITD) | New Delhi | New Delhi | IIIT | Functional | Database | bio.tools |
1274 | NeuroPIpred | A tool to predict, design and scan insect neuropeptides | https://webs.iiitd.edu.in/raghava/neuropipred/ | Scientific Reports | Vaccinomics | Protein | 2019 | 30914676 | Gajendra PS Raghava Indrakant K. Singh | raghava@iiitd.ac.in iksingh@db.du.ac.in | Indraprastha Institute of Information Technology (IIITD) | New Delhi | New Delhi | IIIT | Functional | Database | NA |
1278 | KIXBAESE | Provides useful information about critical aspects of KIX domains such as their intrinsic disorder, hydrophobicity profiles, functional classification and annotation based on domain architectures | http://www.nipgr.res.in/kixbase/home.php | Scientific Reports | Protein Function | Other | 2017 | 29097748 | Gitanjali Yadav | gy@nipgr.ac.in | DBT - National Institute of Plant Genome Research (NIPGR) | New Delhi | New Delhi | DBT | Functional | Database | NA |
1336 | PPIns | A repository of protein-protein interaction sitesbase | http://www.cup.edu.in:99/ppins/home.php | Scientific Reports | Interactome | Protein | 2018 | 30127348 | Mahesh Kulharia | kulharia@gmail.com | Central University of Punjab (CUP) | Bathinda | Punjab | Other | Functional | Database | NA |
1347 | siRNAmod | Database of experimentally validated chemically modified siRNAs | http://crdd.osdd.net/servers/sirnamod | Scientific Reports | Genomics | RNA | 2016 | 26818131 | Manoj Kumar | manojk@imtech.res.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1348 | ge-CRISPR | An integrated pipeline for the prediction and analysis of sgRNAs genome editing efficiency for CRISPR/Cas system | http://bioinfo.imtech.res.in/manojk/gecrispr/ | Scientific Reports | Genomics | RNA | 2016 | 27581337 | Manoj Kumar | manojk@imtech.res.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | NA |
1359 | HPVbase | A knowledgebase of viral integrations, methylation patterns and microRNAs aberrant expression: As potential biomarkers for Human papillomaviruses mediated carcinomas | http://crdd.osdd.net/servers/hpvbase/ | Scientific Reports | Genomics | RNA | 2015 | 26205472 | Manoj Kumar | manojk@imtech.res.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | NA |
1410 | ESCC ATLAS | Facilitates the exploration and the analysis of genes among different populations | http://www.esccatlas.org | Scientific Reports | Genomics | DNA | 2018 | 30143675 | Prashantha Hebbar Manoj Kumar Kashyap | phebbar@mbiomics.org manojkkashyap@gmail.com | Manipal University | Manipal | Karnataka | Other | Functional | Database | NA |
1448 | Layers | A molecular surface peeling algorithm and its applications to analyze protein structures | http://www.csb.iitkgp.ac.in/applications/mol_layers/main | Scientific Reports | Protein Structure Protein Function | Protein | 2015 | 26553411 | Ranjit Prasad Bahadur | r.bahadur@hijli.iitkgp.ernet.in | Indian Institute of Technology (IIT KGP) | Kharagpur | West Bengal | IIT | Functional | Prediction | NA |
1473 | MBSTAR | Multiple instance learning for predicting specific functional binding sites in microRNA targets | http://www.isical.ac.in/~bioinfo_miu/MBStar30.htm | Scientific Reports | Protein Function | RNA | 2015 | 25614300 | Sanghamitra Bandyopadhyay | sanghami@isical.ac.in | Indian Statistical Institute (ISI) | Kolkata | West Bengal | ISI | Functional | Prediction | bio.tools |
1488 | PlantPepDB | Database of plant peptides | http://www.nipgr.ac.in/PlantPepDB/ | Scientific Reports | Genomics | Protein | 2020 | 32042035 | Shailesh Kumar | shailesh@nipgr.ac.in | DBT - National Institute of Plant Genome Research (NIPGR) | New Delhi | New Delhi | DBT | Functional | Database | NA |
1498 | MorCVD | Database for Host-Pathogen Protein-Protein Interactions of Cardiovascular Diseases Related to Microbes | http://morcvd.sblab-nsit.net/About | Scientific Reports | Interactome | Protein | 2019 | 30858555 | Sonika Bhatnagar | sbhatnagar@nsut.ac.in | Netaji Subhas University of Technology | New Delhi | New Delhi | Other | Functional | Database | NA |
1500 | T2DiACoD | Gene Atlas of Type 2 Diabetes Mellitus Associated Complex Disorders | http://t2diacod.igib.res.in/ | Scientific Reports | Interactome | Other | 2017 | 28761062 | Srinivasan Ramachandran | ramu@igib.res.in | CSIR - Institute of Genomics and Integrative Biology (CSIR-IGIB) | New Delhi | New Delhi | CSIR | Functional | Database | NA |
1559 | BOSS | Resource of experimentally validated breast oncogenic siRNAs | http://bioinformatics.cimap.res.in/sharma/boss/ | Scientific Reports | Genomics Vaccinomics | RNA | 2017 | 28821760 | Ashok Sharma | ashoksharma@cimap.res.in | CSIR - Central Institute of Medicinal and Aromatic Plants (CSIR-CIMAP) | Lucknow | Uttar Pradesh | CSIR | Non-Functional | Database | NA |
1587 | A2MDB | Curated compendium of information on Aspergillus & its secondary metabolome | http://www.iictindia.org/A2MDB | Scientific Reports | Genomics | Other | 2017 | 28779078 | Suryanarayana Murty Upadhyayula Ramars Amanchy | director@niperguwahati.ac.in ramars@iict.res.in | National Institute of Pharmaceutical Education and Research (NIPER) Guwahati CSIR-Indian Institute of Chemical Technology (CSIR-IIC | Guwahati Hyderabad | Assam Telangana | NIPER | Non-Functional | Database | NA |