Browse result page of IndioBioDb
The total number entries retrieved from this search are 73
ID | Resource Name | Resource Description | Resource Link | Journal | Class | Source | Year of Publication | PMID | Corresponding Author | Institute | City | State | Functional Status | Funding Agency | Resource category | Other Repository | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1323 | MGEx-Tdb | A novel tissue-specific meta-analysis approach for gene expression predictions, initiated with a mammalian gene expression testis database | http://resource.ibab.ac.in/MGEx-Tdb/ | BMC Genomics | Genomics | DNA | 2010 | 20699007 | Kshitish K Acharya | kshitish@ibab.ac.in | Institute of Bioinformatics and Applied Biotechnology (IBAB) | Bangalore | Karnataka | IBAB | Functional | Database | NA |
1327 | OncomiRdbB | A comprehensive database of microRNAs and their targets in breast cancer | http://tdb.ccmb.res.in/OncomiRdbB/index.htm | BMC Bioinformatics | Genomics Vaccinomics | RNA | 2014 | 24428888 | Lekha Dinesh Kumar | lekha@ccmb.res.in | CSIR - Centre for Cellular and Molecular Biology (CSIR-CCMB) | Hyderabad | Telangana | CSIR | Functional | Database | NA |
1338 | PromBase | A web resource for various genomic features and predicted promoters in prokaryotic genomes | http://nucleix.mbu.iisc.ernet.in/prombase/ | BMC Research Notes | Genomics | DNA | 2011 | 21781326 | Manju Bansal | mb@mbu.iisc.ernet.in | Indian Institute of Science (IISc) | Bangalore | Karnataka | IISc | Functional | Prediction | NA |
1386 | CLAP | A webserver for automatic classification of proteins with special reference to multi:domain proteins | http://nslab.mbu.iisc.ernet.in/clap/ | BMC Bioinformatics | Protein Structure | Protein | 2014 | 25282152 | N Srinivasan | ns@mbu.iisc.ernet.in | Indian Institute of Science (IISc) | Bangalore | Karnataka | IISc | Functional | Prediction | bio.tools |
1394 | CicerTransDB | Resource for expression and functional study of chickpea transcription factors | http://www.cicertransdb.esy.es | BMC plant biology | Genomics | Other | 2016 | 27472917 | Niranjan Chakraborty | nchakraborty@nipgr.ac.in | DBT - National Institute of Plant Genome Research (NIPGR) | New Delhi | New Delhi | DBT | Functional | Database | NA |
1416 | CicArMiSatDB | The chickpea microsatellite database | http://cicarmisatdb.icrisat.org | BMC Bioinformatics | Genomics | DNA | 2014 | 24952649 | Rajeev K Varshney | r.k.varshney@cgiar.org | International Crops Research Institute for the Semi-Arid Tropics (ICRISAT) | Hyderabad | Telangana | Other | Functional | Database | NA |
1417 | OxDBase | A database of oxygenases involved in biodegradation | http://webs.iiitd.edu.in/raghava/oxdbase/ | BMC Research Notes | Protein Structure | Protein | 2009 | 19405962 | Rakesh K Jain | rkj@imtech.res.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1419 | ECMIS | computational approach for the identification of hotspots at protein:protein interfaces | http://caps.ncbs.res.in/download/ECMIS/ECMIS.zip | BMC Bioinformatics | Protein Function | Protein | 2016 | 25228146 | Ramanathan Sowdhamini | mini@ncbs.res.in | National Center for Biological Sciences (NCBS) | Bangalore | Karnataka | NCBS | Functional | Prediction | NA |
1421 | RStrucFam | To predict the structure, type of cognate RNA(s) and function(s) of proteins, where possible, from mere sequence information | http://caps.ncbs.res.in/rstrucfam | BMC Bioinformatics | Protein Function | RNA | 2016 | 27717309 | Ramanathan Sowdhamini | mini@ncbs.res.in | National Center for Biological Sciences (NCBS) | Bangalore | Karnataka | NCBS | Functional | Database | NA |
1422 | DOCKSCORE | A webserver for ranking protein-protein docked poses | http://caps.ncbs.res.in/dockscore/ | BMC Bioinformatics | Protein Structure Protein Function | Protein | 2015 | 25902779 | Ramanathan Sowdhamini | mini@ncbs.res | National Center for Biological Sciences (NCBS) | Bangalore | Karnataka | NCBS | Functional | Prediction | NA |
1429 | COILCHECK+ | Structural attributes for the recognition of weak and anomalous regions in coiled:coils of myosins and other motor proteins | http://caps.ncbs.res.in/coilcheckplus/ | BMC Research Notes | Protein Structure Protein Function | Protein | 2012 | 23009691 | Ramanathan Sowdhamini | mini@ncbs.res.in | National Center for Biological Sciences (NCBS) | Bangalore | Karnataka | NCBS | Functional | Prediction | NA |
1432 | HORI | A web server to compute Higher Order Residue Interactions in protein structures | http://caps.ncbs.res.in/hori/ | BMC Bioinformatics | Protein Structure | Protein | 2010 | 20122196 | Ramanathan Sowdhamini | mini@ncbs.res.in | National Center for Biological Sciences (NCBS) | Bangalore | Karnataka | NCBS | Functional | Prediction | NA |
1440 | FMALIGN | Improvement of alignment accuracy utilizing sequentially conserved motifs | http://caps.ncbs.res.in/FMALIGN/Home.html | BMC Bioinformatics | Genomics | Other | 2004 | 15509307 | Ramanathan Sowdhamini | mini@ncbs.res.in | National Center for Biological Sciences (NCBS) | Bangalore | Karnataka | NCBS | Functional | Prediction | NA |
1442 | EcRBPome | A Comprehensive Database of All Known E. Coli RNA-binding Proteins | http://caps.ncbs.res.in/ecrbpome/ | BMC Bioinformatics | Protein Function | RNA | 2019 | 31117939 | Ramanathan Sowdhamini | mini@ncbs.res.in | National Center for Biological Sciences (NCBS) | Bangalore | Karnataka | NCBS | Functional | Database | bio.tools |
1481 | MycopreonDB | A database of computationally identified operons and transcriptional units in Mycobacteria | http://www.cdfd.org.in/mycoperondb/index.html | BMC Bioinformatics | Genomics | DNA | 2006 | 17254314 | Sarita Ranjan | sarita@cdfd.org.in | CSIR - Centre for DNA Fingerprinting and Diagnostics (CSIR-CDFD) | Hyderabad | Telangana | CSIR | Functional | Database | NA |
1484 | Oxypred2 | Harnessing the evolutionary information on oxygen binding proteins through Support Vector Machines based modules | http://bioinfo.imtech.res.in/servers/muthu/oxypred2/home.html | BMC Research Notes | Protein Function | Protein | 2018 | 29751818 | Selvaraj Muthukrishnan Munish Puri | muthu@imtech.res.in mpuri@pbi.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | NA |
1510 | MYCbase | Collection of experimentally supported functional sites in Myc that can influence the biological cellular processes | http://bicresources.jcbose.ac.in/ssaha4/mycbase | BMC Bioinformatics | Protein Function | Other | 2017 | 28454513 | Sudipto Saha | ssaha4@gmail.com | Bose Institute | Kolkata | West Bengal | Other | Functional | Database | NA |
1529 | SHIFT | Server for Hidden stops analysis In Frame-shifted Translations | http://bioinfoindia.org/shift/ | BMC Research Notes | Genomics | Other | 2013 | 23432998 | Tiratha Raj Singh | tiratharaj@gmail.com | Jaypee University of Information Technology (JUIT) | Solan | Himachal Pradesh | JUIT | Functional | Database | NA |
1535 | MOGA-SVM | Combining Pareto:optimal clusters using supervised learning for identifying co:expressed genes | http://anirbanmukhopadhyay.50webs.com/mogasvm.html | BMC Bioinformatics | Genomics | DNA | 2009 | 19154590 | Ujjwal Maulik | drumaulik@cse.jdvu.ac.in | Jadavpur University | Kolkata | West Bengal | Other | Functional | Prediction | NA |
1581 | PgActPred | Support vector machine (SVM) based multiclass prediction with basic statistical analysis of plasminogen activators | http://mamsap.it.deakin.edu.au/plas_pred/home.html | BMC Research Notes | Vaccinomics | Other | 2014 | 24468032 | Munish Puri | munish.puri@deakin.edu.au | Punjabi University | Patiala | Punjab | Other | Non-Functional | Prediction | BTISNet |
1585 | H2OGpred | Server for predicting catalytic domains in 2-oxoglutarate dependent dioxygenases | http://comp-biol.theacms.in/H2OGpred.html | BMC Research Notes | Protein Function | Protein | 2012 | 22862831 | Siddhartha Kundu | siddharthakundu@theacms.in | Army College of Medical Sciences (ACMS) | New Delhi | New Delhi | Other | Non-Functional | Prediction | NA |
1596 | HyPe | Prediction of peptidoglycan hydrolases | http://metagenomics.iiserb.ac.in/hype/ | BMC Genomics | Protein Function | Protein | 2016 | 27229861 | Vineet K Sharma | vineetks@iiserb.ac.in | Indian Institute of Science Education and Research (IISERB) | Bhopal | Madhya Pradesh | IISER | Functional | Prediction | bio.tools |
1603 | piRNAQuest | Searching the piRNAome for silencers | http://bicresources.jcbose.ac.in/zhumur/pirnaquest/ | BMC Genomics | Genomics | RNA | 2014 | 24997126 | Zhumur Ghosh | zhumur@jcbose.ac.in | Bose Institute | Kolkata | West Bengal | Other | Functional | Database | NA |