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Browse result page of IndioBioDb

The total number entries retrieved from this search are 66
IDResource NameResource DescriptionResource LinkJournalClassSourceYear of PublicationPMIDCorresponding AuthorEmailInstituteCityStateFunctional StatusFunding AgencyResource categoryOther Repository
1012CbLncRNAdbComputationally identify lncRNAs based on a proposed index and study their targeted geneshttp://cabgrid.res.in/cblncrnadbNucleic Acids ResearchGenomicsRNA2018 29753807A R Raoar.rao@icar.gov.inICAR - Indian Agricultural Statistics Research Institute (IASRI)New DelhiNew DelhiICARFunctionalDatabaseNA
1016Human ProteinpediaA unified discovery resource for proteomics researchhttp://www.humanproteinpedia.org/Nucleic Acids ResearchProtein StructureProtein2009 18948298Akhilesh Pandeypandey@jhmi.eduInstitute of Bioinformatics (IOB)BangaloreKarnatakaOtherFunctionalDatabaseNA
1017Human Protein Reference DatabaseDatabase of curated proteomic information pertaining to human proteinshttp://www.hprd.org/Nucleic Acids ResearchProtein FunctionProtein2009 18988627Akhilesh Pandeypandey@jhmi.eduInstitute of Bioinformatics (IOB)BangaloreKarnatakaIOBFunctionalDatabaseNA
1019ProGlycProtA repository of experimentally characterized prokaryotic glycoproteinshttp://www.proglycprot.org/Nucleic Acids ResearchProtein StructureProtein2012 22039152Alka Raoraoalka@imtech.res.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalDatabasebio.tools
1056BhageerathAn energy based web enabled computer software suite for limiting the search space of tertiary structures of small globular proteinshttp://www.scfbio-iitd.res.in/bhageerath/index.jspNucleic Acids ResearchProtein StructureProtein2006 17090600B Jayarambjayaram@chemistry.iitd.ac.inIndian Institute of Technology (IIT D)New DelhiNew DelhiIITFunctionalPredictionBTISNet
1069RiPPMinerA bioinformatics resource for deciphering chemical structures of RiPPs based on prediction of cleavage and cross-linkshttp://www.nii.ac.in/rippminer.htmlNucleic Acids ResearchCheminformaticsOther2017 28499008Debasisa Mohantydeb@nii.res.inDBT - National Institute of Immunology (NII)New DelhiNew DelhiDBTFunctionalPredictionNA
1073SBSPKSStructure based sequence analysis of polyketide synthaseshttp://www.nii.ac.in/sbspks.htmlNucleic Acids ResearchProtein StructureProtein2010 20444870Debasisa Mohantydeb@nii.res.inDBT - National Institute of Immunology (NII)New DelhiNew DelhiDBTFunctionalPredictionbio.tools
1131SATPdbDatabase of structurally annotated therapeutic peptideshttp://webs.iiitd.edu.in/raghava/satpdb/Nucleic Acids ResearchProtein FunctionProtein2016 26527728Gajendra PS Raghavaraghava@iiitd.ac.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalDatabaseBTISNet
1147CancerPPDDatabase of anticancer peptides and proteinshttp://webs.iiitd.edu.in/raghava/cancerppd/Nucleic Acids ResearchBioDrugProtein2015 25270878Gajendra PS Raghavaraghava@iiitd.ac.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalDatabasebio.tools, BTISNet
1148AHTPDBComprehensive platform for analysis and presentation of antihypertensive peptideshttp://webs.iiitd.edu.in/raghava/ahtpdb/Nucleic Acids ResearchBioDrugProtein2015 25392419Gajendra PS Raghavaraghava@iiitd.ac.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalDatabasebio.tools, BTISNet
1157HemolytiKA database of experimentally determined hemolytic and non-hemolytic peptideshttp://webs.iiitd.edu.in/raghava/hemolytik/Nucleic Acids ResearchBioDrugProtein2014 24174543Gajendra PS Raghavaraghava@iiitd.ac.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalDatabasebio.tools, BTISNet
1180ccPDBCompilation and creation of data sets from Protein Data Bankhttp://crdd.osdd.net/raghava/ccpdb/Nucleic Acids ResearchProtein StructureProtein2012 22139939Gajendra PS Raghavaraghava@iiitd.ac.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalDatabasebio.tools, BTISNet
1189AntigenDBAn immunoinformatics database of pathogen antigenshttp://webs.iiitd.edu.in/raghava/antigendb/Nucleic Acids ResearchVaccinomicsProtein2010 19820110Gajendra PS Raghavaraghava@iiitd.ac.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalDatabaseBTISNet
1227AlgPredPrediction of allergenic proteins and mapping of IgE epitopeswww.imtech.res.in/raghava/algpred/Nucleic Acids ResearchVaccinomicsProtein2006 16844994Gajendra PS Raghavaraghava@iiitd.ac.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalPredictionbio.tools, BTISNet
1236GPCRsclassThis webserver predicts amine type of G-protein coupled receptorshttp://webs.iiitd.edu.in/raghava/gpcrsclass/Nucleic Acids ResearchProtein FunctionProtein2005 15980444Gajendra PS Raghavaraghava@iiitd.ac.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalPredictionbio.tools
1237BhairPredPrediction of beta-hairpins in a protein from multiple alignment information using ANN and SVM techniqueshttp://crdd.osdd.net/raghava/bhairpred/Nucleic Acids ResearchProtein FunctionProtein2005 15988830Gajendra PS Raghavaraghava@iiitd.ac.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalPredictionbio.tools, BTISNet
1238PcleavageSVM based method for prediction of constitutive proteasome and immunoproteasome cleavage sites in antigenic sequenceshttp://webs.iiitd.edu.in/raghava/pcleavage/Nucleic Acids ResearchVaccinomicsProtein2005 15988831Gajendra PS Raghavaraghava@iiitd.ac.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalPredictionbio.tools, BTISNet
1249GPCRpredSVM-based method for prediction of families and subfamilies of G-protein coupled receptorshttp://webs.iiitd.edu.in/raghava/gpcrpred/Nucleic Acids ResearchProtein FunctionProtein2004 15215416Gajendra PS Raghavaraghava@iiitd.ac.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalPredictionbio.tools, BTISNet
1250ESLpredSVM-based method for subcellular localization of eukaryotic proteins using dipeptide composition and PSI-BLASThttp://webs.iiitd.edu.in/raghava/eslpred/Nucleic Acids ResearchProtein FunctionProtein2004 15215421Gajendra PS Raghavaraghava@iiitd.ac.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalPredictionBTISNet
1272CPPsite 2.0Repository of experimentally validated cell-penetrating peptideshttp://webs.iiitd.edu.in/raghava/cppsite/Nucleic Acids ResearchBioDrugProtein2016 26586798Gajendra PS Raghava Ankur Gautamraghava@iiitd.ac.in ankurgautam@imtech.res.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalDatabaseNA
1275FlavorDBDynamic, user-friendly interface of the resource facilitates exploration of flavor molecules for divergent applications: finding molecules matching a desired flavor or structure; exploring molecules of an ingredient; discovering novel food pairings; finding the molecular essence of food ingredients; associating chemical features with a flavor and morehttp://cosylab.iiitd.edu.in/flavordb/Nucleic Acids ResearchCheminformaticsOther2018 29059383Ganesh Baglerbagler@iiitd.ac.inIndraprastha Institute of Information Technology (IIITD)New DelhiNew DelhiIIITFunctionalDatabaseNA
1286MICASDatabase of prokaryotic microsatelliteshttp://www.cdfd.org.in/micasNucleic Acids ResearchGenomicsDNA2003 12519959Hampapathalu A Nagarajaramhan@cdfd.org.inCSIR - Centre for DNA Fingerprinting and Diagnostics (CSIR-CDFD)HyderabadTelanganaCSIRFunctionalDatabaseNA
1307SEMA web based GUI to generate and visualize the macromoleculeshttp://dicsoft2.physics.iisc.ernet.in/sem/Nucleic Acids ResearchGenomicsOther2003 12824326K Sekarsekar@physics.iisc.ernet.inIndian Institute of Science (IISc)BangaloreKarnatakaIIScFunctionalPredictionbio.tools, BTISNet
1325IGDDIndian genetic disease databasehttp://www.igdd.iicb.res.inNucleic Acids ResearchGenomicsDNA2011 21037256Kunal Raykunalray@gmail.comCSIR - Indian Institute of Chemical Biology (CSIR-IICB)KolkataWest BengalCSIRFunctionalDatabasebio.tools
1330SilkSatDbA microsatellite database of the silkworm, Bombyx morihttp://www.cdfd.org.in/silksatdbNucleic Acids ResearchGenomicsDNA2005 15608226M D Prasadjnagaraju@cdfd.org.inCSIR - Centre for DNA Fingerprinting and Diagnostics (CSIR-CDFD)HyderabadTelanganaCSIRFunctionalDatabaseNA
1333PIZSAAn Empirical Scoring Scheme for Evaluation of Protein-Protein Interactionshttp://cospi.iiserpune.ac.in/pizsa/Nucleic Acids ResearchProtein FunctionProtein2019 31114890M S Madhusudhanmadhusudhan@iiserpune.ac.inIndian Institute of Science Education and Research (IISERP)PuneMaharashtraIISERFunctionalPredictionbio.tools
1341aBiofilmHarbors a database, a predictor, and the data visualization moduleshttp://bioinfo.imtech.res.in/manojk/abiofilm/Nucleic Acids ResearchCheminformaticsOther2018 29156005Manoj Kumarmanojk@imtech.res.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalDatabaseNA
1346SigMolRepertoire of quorum sensing signaling molecules in prokaryoteshttp://bioinfo.imtech.res.in/manojk/sigmolNucleic Acids ResearchCheminformaticsOther2016 26490957Manoj Kumarmanojk@imtech.res.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalDatabaseNA
1352AVPdbA database of experimentally validated antiviral peptides targeting medically important viruseshttp://crdd.osdd.net/servers/avpdbNucleic Acids ResearchBioDrugProtein2014 24285301Manoj Kumarmanojk@imtech.res.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalDatabasebio.tools
1356VIRsiRNAdbA curated database of experimentally validated viral siRNA/shRNAhttp://crdd.osdd.net/servers/virsirnadbNucleic Acids ResearchGenomicsRNA2012 22139916Manoj Kumarmanojk@imtech.res.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalDatabasebio.tools
1357AVPpredPrediction of highly effective antiviral peptideshttp://crdd.osdd.net/servers/avppredNucleic Acids ResearchBioDrugProtein2012 22638580Manoj Kumarmanojk@imtech.res.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalPredictionbio.tools
1383KinGA database of protein kinases in genomeshttp://king.mbu.iisc.ernet.in/Nucleic Acids ResearchGenomics Protein StructureProtein2004 14681382N Srinivasanns@mbu.iisc.ernet.inIndian Institute of Science (IISc)BangaloreKarnatakaIIScFunctionalDatabaseNA
1384PALIA database of Phylogeny and ALIgnment of homologous protein structureshttp://pauling.mbu.iisc.ernet.in/Nucleic Acids ResearchProtein StructureProtein2001 11125050N Srinivasanns@mbu.iisc.ernet.inIndian Institute of Science (IISc)BangaloreKarnatakaIIScFunctionalDatabaseNA
1385NrichDSequence databases enriched with computationally designed protein-like sequences aid in remote homology detectionhttp://proline.biochem.iisc.ernet.in/NRICHD/Nucleic Acids ResearchProtein StructureProtein2015 25262355N Srinivasanns@mbu.iisc.ernet.inIndian Institute of Science (IISc)BangaloreKarnatakaIIScFunctionalDatabaseNA
1397NAPSNetwork Analysis of Protein Structureshttp://bioinf.iiit.ac.in/NAPS/Nucleic Acids ResearchProtein Structure InteractomeProtein2016 27151201Nita Parekhnita@iiit.ac.inInternational Institute of Information Technology (IIITH)HyderabadTelanganaIIITFunctionalPredictionNA
1399NAPS UpdateNetwork Analysis of Protein Structureshttp://bioinf.iiit.ac.in/NAPS/Nucleic Acids ResearchProtein Structure InteractomeProtein2019 31106363Nita Parekhnita@iiit.ac.inInternational Institute of Information Technology (IIITH)HyderabadTelanganaIIITFunctionalPredictionNA
1400RAPIDResource of Asian Primary Immunodeficiency Diseaseshttp://www.ims.riken.jp/english/Nucleic Acids ResearchVaccinomicsOther2009 18842635Osamu Oharaoosamu@rcai.riken.jpInstitute of Bioinformatics (IOB)BangaloreKarnatakaIOBFunctionalDatabaseNA
1418SMMRNAA database of small molecule modulators of RNAhttp://www.smmrna.orgNucleic Acids ResearchGenomicsRNA2014 24163098Raman Parkeshrparkesh@imtech.res.inCSIR - Institute of Microbial Technology (CSIR-IMTECH)ChandigarhChandigarhCSIRFunctionalDatabasebio.tools
1423LenVarDBDatabase of length-variant protein domainshttp://caps.ncbs.res.in/lenvardbNucleic Acids ResearchProtein StructureProtein2014 24194591Ramanathan Sowdhaminimini@ncbs.res.inNational Center for Biological Sciences (NCBS)BangaloreKarnatakaNCBSFunctionalDatabaseNA
1428PASS2An update to the database of structure-based sequence alignments of structural domain superfamilieshttp://caps.ncbs.res.in/pass2/Nucleic Acids ResearchProtein StructureDNA2012 22123743Ramanathan Sowdhaminimini@ncbs.res.inNational Center for Biological Sciences (NCBS)BangaloreKarnatakaNCBSFunctionalDatabasebio.tools, Bioinformatics Software and Tools
1437HARMONYA server for the assessment of protein structureshttp://caps.ncbs.res.in/harmony/Nucleic Acids ResearchProtein StructureProtein2006 16844999Ramanathan Sowdhaminimini@ncbs.res.inNational Center for Biological Sciences (NCBS)BangaloreKarnatakaNCBSFunctionalPredictionbio.tools
1438DIALA webbased server for the automatic identification of structural domains in proteinshttp://caps.ncbs.res.in/DIAL/home.htmlNucleic Acids ResearchProtein StructureProtein2005 15980441Ramanathan Sowdhaminimini@ncbs.res.inNational Center for Biological Sciences (NCBS)BangaloreKarnatakaNCBSFunctionalPredictionNA
1439DSDBASEA consortium of native and modelled disulphide bonds in proteinshttp://www.ncbs.res.in/Nucleic Acids ResearchProtein StructureProtein2004 14681394Ramanathan Sowdhaminimini@ncbs.res.inNational Center for Biological Sciences (NCBS)BangaloreKarnatakaNCBSFunctionalDatabaseBioinformatics Software and Tools
1445MIPModDBA central resource for the superfamily of major intrinsic proteinshttp://bioinfo.iitk.ac.in/MIPModDBNucleic Acids ResearchProtein StructureProtein2012 22080560Ramasubbu Sankararamakrishnanrsankar@iitk.ac.inIndian Institute of Technology (IIT R)RoorkeeUttarakhandIITFunctionalDatabaseNA
1458THGSA web-based database of Transmembrane Helices in Genome Sequenceshttp:// pranag.physics.iisc.ernet.in/thgs/Nucleic Acids ResearchGenomicsOther2004 14681375S A Fernandosekar@physics.iisc.ernet.inIndian Institute of Science (IISc)BangaloreKarnatakaIIScFunctionalDatabaseBioinformatics Software and Tools, BTISNet
1464DBETHA database of Bacterial Exotoxins for Humanhttp://www.hpppi.iicb.res.in/btox/Nucleic Acids ResearchCheminformaticsOther2012 22102573Saikat Chakrabartisaikat@csiriicb.inCSIR - Indian Institute of Chemical Biology (CSIR-IICB)KolkataWest BengalCSIRFunctionalPredictionbio.tools
1465SPEER-SERVERA web server for prediction of protein specificity determining siteshttp://www.hpppi.iicb.res.in/ss/Nucleic Acids ResearchProtein FunctionProtein2012 22689646Saikat Chakrabartisaikat273@gmail.comCSIR - Indian Institute of Chemical Biology (CSIR-IICB)KolkataWest BengalCSIRFunctionalPredictionbio.tools
1468MARomeA resource for annotation of Scaffold and Matrix Attachment Regionshttp://196.1.114.46:8080/MARome/indexNucleic Acids ResearchGenomicsOther2019 31265077Samit Chattopadhyay Smriti Mittal Abhijeet Kulabhijeet@bioinfo.net.in spmittal@unipune.ac.in samit@iiUniversity of PunePuneMaharashtraOtherFunctionalDatabasebio.tools
1475HistomeA relational knowledgebase of human histone proteins and histone modifying enzymeshttp://www.actrec.gov.in/histome/.Nucleic Acids ResearchProtein StructureProtein2012 22140112Sanjay Gupta Sanjeev Galandesanjeev@iiserpune.ac.in sgupta@actrec.gov.inAdvanced Centre for Treatment Research and Education in Cancer (ACTREC) Tata Memorial CentreMumbaiMaharashtraACTRECFunctionalDatabasebio.tools, BTISNet
1482MCDRPManually curated database of rice proteinshttp://www.genomeindia.org/biocurationNucleic Acids ResearchProtein StructureProtein2014 24214963Saurabh Raghuvanshisaurabh@genomeindia.orgUniversity of Delhi (DU) South CampusNew DelhiNew DelhiDUFunctionalDatabaseNA