Browse result page of IndioBioDb
The total number entries retrieved from this search are 66
ID | Resource Name | Resource Description | Resource Link | Journal | Class | Source | Year of Publication | PMID | Corresponding Author | Institute | City | State | Functional Status | Funding Agency | Resource category | Other Repository | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1012 | CbLncRNAdb | Computationally identify lncRNAs based on a proposed index and study their targeted genes | http://cabgrid.res.in/cblncrnadb | Nucleic Acids Research | Genomics | RNA | 2018 | 29753807 | A R Rao | ar.rao@icar.gov.in | ICAR - Indian Agricultural Statistics Research Institute (IASRI) | New Delhi | New Delhi | ICAR | Functional | Database | NA |
1016 | Human Proteinpedia | A unified discovery resource for proteomics research | http://www.humanproteinpedia.org/ | Nucleic Acids Research | Protein Structure | Protein | 2009 | 18948298 | Akhilesh Pandey | pandey@jhmi.edu | Institute of Bioinformatics (IOB) | Bangalore | Karnataka | Other | Functional | Database | NA |
1017 | Human Protein Reference Database | Database of curated proteomic information pertaining to human proteins | http://www.hprd.org/ | Nucleic Acids Research | Protein Function | Protein | 2009 | 18988627 | Akhilesh Pandey | pandey@jhmi.edu | Institute of Bioinformatics (IOB) | Bangalore | Karnataka | IOB | Functional | Database | NA |
1019 | ProGlycProt | A repository of experimentally characterized prokaryotic glycoproteins | http://www.proglycprot.org/ | Nucleic Acids Research | Protein Structure | Protein | 2012 | 22039152 | Alka Rao | raoalka@imtech.res.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | bio.tools |
1056 | Bhageerath | An energy based web enabled computer software suite for limiting the search space of tertiary structures of small globular proteins | http://www.scfbio-iitd.res.in/bhageerath/index.jsp | Nucleic Acids Research | Protein Structure | Protein | 2006 | 17090600 | B Jayaram | bjayaram@chemistry.iitd.ac.in | Indian Institute of Technology (IIT D) | New Delhi | New Delhi | IIT | Functional | Prediction | BTISNet |
1069 | RiPPMiner | A bioinformatics resource for deciphering chemical structures of RiPPs based on prediction of cleavage and cross-links | http://www.nii.ac.in/rippminer.html | Nucleic Acids Research | Cheminformatics | Other | 2017 | 28499008 | Debasisa Mohanty | deb@nii.res.in | DBT - National Institute of Immunology (NII) | New Delhi | New Delhi | DBT | Functional | Prediction | NA |
1073 | SBSPKS | Structure based sequence analysis of polyketide synthases | http://www.nii.ac.in/sbspks.html | Nucleic Acids Research | Protein Structure | Protein | 2010 | 20444870 | Debasisa Mohanty | deb@nii.res.in | DBT - National Institute of Immunology (NII) | New Delhi | New Delhi | DBT | Functional | Prediction | bio.tools |
1131 | SATPdb | Database of structurally annotated therapeutic peptides | http://webs.iiitd.edu.in/raghava/satpdb/ | Nucleic Acids Research | Protein Function | Protein | 2016 | 26527728 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | BTISNet |
1147 | CancerPPD | Database of anticancer peptides and proteins | http://webs.iiitd.edu.in/raghava/cancerppd/ | Nucleic Acids Research | BioDrug | Protein | 2015 | 25270878 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | bio.tools, BTISNet |
1148 | AHTPDB | Comprehensive platform for analysis and presentation of antihypertensive peptides | http://webs.iiitd.edu.in/raghava/ahtpdb/ | Nucleic Acids Research | BioDrug | Protein | 2015 | 25392419 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | bio.tools, BTISNet |
1157 | HemolytiK | A database of experimentally determined hemolytic and non-hemolytic peptides | http://webs.iiitd.edu.in/raghava/hemolytik/ | Nucleic Acids Research | BioDrug | Protein | 2014 | 24174543 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | bio.tools, BTISNet |
1180 | ccPDB | Compilation and creation of data sets from Protein Data Bank | http://crdd.osdd.net/raghava/ccpdb/ | Nucleic Acids Research | Protein Structure | Protein | 2012 | 22139939 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | bio.tools, BTISNet |
1189 | AntigenDB | An immunoinformatics database of pathogen antigens | http://webs.iiitd.edu.in/raghava/antigendb/ | Nucleic Acids Research | Vaccinomics | Protein | 2010 | 19820110 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | BTISNet |
1227 | AlgPred | Prediction of allergenic proteins and mapping of IgE epitopes | www.imtech.res.in/raghava/algpred/ | Nucleic Acids Research | Vaccinomics | Protein | 2006 | 16844994 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools, BTISNet |
1236 | GPCRsclass | This webserver predicts amine type of G-protein coupled receptors | http://webs.iiitd.edu.in/raghava/gpcrsclass/ | Nucleic Acids Research | Protein Function | Protein | 2005 | 15980444 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools |
1237 | BhairPred | Prediction of beta-hairpins in a protein from multiple alignment information using ANN and SVM techniques | http://crdd.osdd.net/raghava/bhairpred/ | Nucleic Acids Research | Protein Function | Protein | 2005 | 15988830 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools, BTISNet |
1238 | Pcleavage | SVM based method for prediction of constitutive proteasome and immunoproteasome cleavage sites in antigenic sequences | http://webs.iiitd.edu.in/raghava/pcleavage/ | Nucleic Acids Research | Vaccinomics | Protein | 2005 | 15988831 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools, BTISNet |
1249 | GPCRpred | SVM-based method for prediction of families and subfamilies of G-protein coupled receptors | http://webs.iiitd.edu.in/raghava/gpcrpred/ | Nucleic Acids Research | Protein Function | Protein | 2004 | 15215416 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools, BTISNet |
1250 | ESLpred | SVM-based method for subcellular localization of eukaryotic proteins using dipeptide composition and PSI-BLAST | http://webs.iiitd.edu.in/raghava/eslpred/ | Nucleic Acids Research | Protein Function | Protein | 2004 | 15215421 | Gajendra PS Raghava | raghava@iiitd.ac.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | BTISNet |
1272 | CPPsite 2.0 | Repository of experimentally validated cell-penetrating peptides | http://webs.iiitd.edu.in/raghava/cppsite/ | Nucleic Acids Research | BioDrug | Protein | 2016 | 26586798 | Gajendra PS Raghava Ankur Gautam | raghava@iiitd.ac.in ankurgautam@imtech.res.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1275 | FlavorDB | Dynamic, user-friendly interface of the resource facilitates exploration of flavor molecules for divergent applications: finding molecules matching a desired flavor or structure; exploring molecules of an ingredient; discovering novel food pairings; finding the molecular essence of food ingredients; associating chemical features with a flavor and more | http://cosylab.iiitd.edu.in/flavordb/ | Nucleic Acids Research | Cheminformatics | Other | 2018 | 29059383 | Ganesh Bagler | bagler@iiitd.ac.in | Indraprastha Institute of Information Technology (IIITD) | New Delhi | New Delhi | IIIT | Functional | Database | NA |
1286 | MICAS | Database of prokaryotic microsatellites | http://www.cdfd.org.in/micas | Nucleic Acids Research | Genomics | DNA | 2003 | 12519959 | Hampapathalu A Nagarajaram | han@cdfd.org.in | CSIR - Centre for DNA Fingerprinting and Diagnostics (CSIR-CDFD) | Hyderabad | Telangana | CSIR | Functional | Database | NA |
1307 | SEM | A web based GUI to generate and visualize the macromolecules | http://dicsoft2.physics.iisc.ernet.in/sem/ | Nucleic Acids Research | Genomics | Other | 2003 | 12824326 | K Sekar | sekar@physics.iisc.ernet.in | Indian Institute of Science (IISc) | Bangalore | Karnataka | IISc | Functional | Prediction | bio.tools, BTISNet |
1325 | IGDD | Indian genetic disease database | http://www.igdd.iicb.res.in | Nucleic Acids Research | Genomics | DNA | 2011 | 21037256 | Kunal Ray | kunalray@gmail.com | CSIR - Indian Institute of Chemical Biology (CSIR-IICB) | Kolkata | West Bengal | CSIR | Functional | Database | bio.tools |
1330 | SilkSatDb | A microsatellite database of the silkworm, Bombyx mori | http://www.cdfd.org.in/silksatdb | Nucleic Acids Research | Genomics | DNA | 2005 | 15608226 | M D Prasad | jnagaraju@cdfd.org.in | CSIR - Centre for DNA Fingerprinting and Diagnostics (CSIR-CDFD) | Hyderabad | Telangana | CSIR | Functional | Database | NA |
1333 | PIZSA | An Empirical Scoring Scheme for Evaluation of Protein-Protein Interactions | http://cospi.iiserpune.ac.in/pizsa/ | Nucleic Acids Research | Protein Function | Protein | 2019 | 31114890 | M S Madhusudhan | madhusudhan@iiserpune.ac.in | Indian Institute of Science Education and Research (IISERP) | Pune | Maharashtra | IISER | Functional | Prediction | bio.tools |
1341 | aBiofilm | Harbors a database, a predictor, and the data visualization modules | http://bioinfo.imtech.res.in/manojk/abiofilm/ | Nucleic Acids Research | Cheminformatics | Other | 2018 | 29156005 | Manoj Kumar | manojk@imtech.res.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1346 | SigMol | Repertoire of quorum sensing signaling molecules in prokaryotes | http://bioinfo.imtech.res.in/manojk/sigmol | Nucleic Acids Research | Cheminformatics | Other | 2016 | 26490957 | Manoj Kumar | manojk@imtech.res.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | NA |
1352 | AVPdb | A database of experimentally validated antiviral peptides targeting medically important viruses | http://crdd.osdd.net/servers/avpdb | Nucleic Acids Research | BioDrug | Protein | 2014 | 24285301 | Manoj Kumar | manojk@imtech.res.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | bio.tools |
1356 | VIRsiRNAdb | A curated database of experimentally validated viral siRNA/shRNA | http://crdd.osdd.net/servers/virsirnadb | Nucleic Acids Research | Genomics | RNA | 2012 | 22139916 | Manoj Kumar | manojk@imtech.res.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | bio.tools |
1357 | AVPpred | Prediction of highly effective antiviral peptides | http://crdd.osdd.net/servers/avppred | Nucleic Acids Research | BioDrug | Protein | 2012 | 22638580 | Manoj Kumar | manojk@imtech.res.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Prediction | bio.tools |
1383 | KinG | A database of protein kinases in genomes | http://king.mbu.iisc.ernet.in/ | Nucleic Acids Research | Genomics Protein Structure | Protein | 2004 | 14681382 | N Srinivasan | ns@mbu.iisc.ernet.in | Indian Institute of Science (IISc) | Bangalore | Karnataka | IISc | Functional | Database | NA |
1384 | PALI | A database of Phylogeny and ALIgnment of homologous protein structures | http://pauling.mbu.iisc.ernet.in/ | Nucleic Acids Research | Protein Structure | Protein | 2001 | 11125050 | N Srinivasan | ns@mbu.iisc.ernet.in | Indian Institute of Science (IISc) | Bangalore | Karnataka | IISc | Functional | Database | NA |
1385 | NrichD | Sequence databases enriched with computationally designed protein-like sequences aid in remote homology detection | http://proline.biochem.iisc.ernet.in/NRICHD/ | Nucleic Acids Research | Protein Structure | Protein | 2015 | 25262355 | N Srinivasan | ns@mbu.iisc.ernet.in | Indian Institute of Science (IISc) | Bangalore | Karnataka | IISc | Functional | Database | NA |
1397 | NAPS | Network Analysis of Protein Structures | http://bioinf.iiit.ac.in/NAPS/ | Nucleic Acids Research | Protein Structure Interactome | Protein | 2016 | 27151201 | Nita Parekh | nita@iiit.ac.in | International Institute of Information Technology (IIITH) | Hyderabad | Telangana | IIIT | Functional | Prediction | NA |
1399 | NAPS Update | Network Analysis of Protein Structures | http://bioinf.iiit.ac.in/NAPS/ | Nucleic Acids Research | Protein Structure Interactome | Protein | 2019 | 31106363 | Nita Parekh | nita@iiit.ac.in | International Institute of Information Technology (IIITH) | Hyderabad | Telangana | IIIT | Functional | Prediction | NA |
1400 | RAPID | Resource of Asian Primary Immunodeficiency Diseases | http://www.ims.riken.jp/english/ | Nucleic Acids Research | Vaccinomics | Other | 2009 | 18842635 | Osamu Ohara | oosamu@rcai.riken.jp | Institute of Bioinformatics (IOB) | Bangalore | Karnataka | IOB | Functional | Database | NA |
1418 | SMMRNA | A database of small molecule modulators of RNA | http://www.smmrna.org | Nucleic Acids Research | Genomics | RNA | 2014 | 24163098 | Raman Parkesh | rparkesh@imtech.res.in | CSIR - Institute of Microbial Technology (CSIR-IMTECH) | Chandigarh | Chandigarh | CSIR | Functional | Database | bio.tools |
1423 | LenVarDB | Database of length-variant protein domains | http://caps.ncbs.res.in/lenvardb | Nucleic Acids Research | Protein Structure | Protein | 2014 | 24194591 | Ramanathan Sowdhamini | mini@ncbs.res.in | National Center for Biological Sciences (NCBS) | Bangalore | Karnataka | NCBS | Functional | Database | NA |
1428 | PASS2 | An update to the database of structure-based sequence alignments of structural domain superfamilies | http://caps.ncbs.res.in/pass2/ | Nucleic Acids Research | Protein Structure | DNA | 2012 | 22123743 | Ramanathan Sowdhamini | mini@ncbs.res.in | National Center for Biological Sciences (NCBS) | Bangalore | Karnataka | NCBS | Functional | Database | bio.tools, Bioinformatics Software and Tools |
1437 | HARMONY | A server for the assessment of protein structures | http://caps.ncbs.res.in/harmony/ | Nucleic Acids Research | Protein Structure | Protein | 2006 | 16844999 | Ramanathan Sowdhamini | mini@ncbs.res.in | National Center for Biological Sciences (NCBS) | Bangalore | Karnataka | NCBS | Functional | Prediction | bio.tools |
1438 | DIAL | A webbased server for the automatic identification of structural domains in proteins | http://caps.ncbs.res.in/DIAL/home.html | Nucleic Acids Research | Protein Structure | Protein | 2005 | 15980441 | Ramanathan Sowdhamini | mini@ncbs.res.in | National Center for Biological Sciences (NCBS) | Bangalore | Karnataka | NCBS | Functional | Prediction | NA |
1439 | DSDBASE | A consortium of native and modelled disulphide bonds in proteins | http://www.ncbs.res.in/ | Nucleic Acids Research | Protein Structure | Protein | 2004 | 14681394 | Ramanathan Sowdhamini | mini@ncbs.res.in | National Center for Biological Sciences (NCBS) | Bangalore | Karnataka | NCBS | Functional | Database | Bioinformatics Software and Tools |
1445 | MIPModDB | A central resource for the superfamily of major intrinsic proteins | http://bioinfo.iitk.ac.in/MIPModDB | Nucleic Acids Research | Protein Structure | Protein | 2012 | 22080560 | Ramasubbu Sankararamakrishnan | rsankar@iitk.ac.in | Indian Institute of Technology (IIT R) | Roorkee | Uttarakhand | IIT | Functional | Database | NA |
1458 | THGS | A web-based database of Transmembrane Helices in Genome Sequences | http:// pranag.physics.iisc.ernet.in/thgs/ | Nucleic Acids Research | Genomics | Other | 2004 | 14681375 | S A Fernando | sekar@physics.iisc.ernet.in | Indian Institute of Science (IISc) | Bangalore | Karnataka | IISc | Functional | Database | Bioinformatics Software and Tools, BTISNet |
1464 | DBETH | A database of Bacterial Exotoxins for Human | http://www.hpppi.iicb.res.in/btox/ | Nucleic Acids Research | Cheminformatics | Other | 2012 | 22102573 | Saikat Chakrabarti | saikat@csiriicb.in | CSIR - Indian Institute of Chemical Biology (CSIR-IICB) | Kolkata | West Bengal | CSIR | Functional | Prediction | bio.tools |
1465 | SPEER-SERVER | A web server for prediction of protein specificity determining sites | http://www.hpppi.iicb.res.in/ss/ | Nucleic Acids Research | Protein Function | Protein | 2012 | 22689646 | Saikat Chakrabarti | saikat273@gmail.com | CSIR - Indian Institute of Chemical Biology (CSIR-IICB) | Kolkata | West Bengal | CSIR | Functional | Prediction | bio.tools |
1468 | MARome | A resource for annotation of Scaffold and Matrix Attachment Regions | http://196.1.114.46:8080/MARome/index | Nucleic Acids Research | Genomics | Other | 2019 | 31265077 | Samit Chattopadhyay Smriti Mittal Abhijeet Kul | abhijeet@bioinfo.net.in spmittal@unipune.ac.in samit@ii | University of Pune | Pune | Maharashtra | Other | Functional | Database | bio.tools |
1475 | Histome | A relational knowledgebase of human histone proteins and histone modifying enzymes | http://www.actrec.gov.in/histome/. | Nucleic Acids Research | Protein Structure | Protein | 2012 | 22140112 | Sanjay Gupta Sanjeev Galande | sanjeev@iiserpune.ac.in sgupta@actrec.gov.in | Advanced Centre for Treatment Research and Education in Cancer (ACTREC) Tata Memorial Centre | Mumbai | Maharashtra | ACTREC | Functional | Database | bio.tools, BTISNet |
1482 | MCDRP | Manually curated database of rice proteins | http://www.genomeindia.org/biocuration | Nucleic Acids Research | Protein Structure | Protein | 2014 | 24214963 | Saurabh Raghuvanshi | saurabh@genomeindia.org | University of Delhi (DU) South Campus | New Delhi | New Delhi | DU | Functional | Database | NA |