| Link | Description |
| IEDB | Database of antibody and T cell epitopes for humans, non-human primates, rodents, and other animal species. |
| CAMP | Database for antimicrobial peptides. |
| APD2 | Database for antimicrobial peptides. |
| ANTIMIC | ANTIMIC is a comprehensive database of known and putative antimicrobial peptides, which contains ~1700 of these peptides. |
| PhytAMP | PhytAMP is a database of plant antimicrobial peptides. |
| BIOPD | BioPD is a Bioactive Polypeptide Database & hence a resource of bioactive peptides. |
| SPDB | Database containing signal sequences of archaea, prokaryotes and eukaryotes. |
| TumorHope | TumorHope is a curated database of tumor homing peptides. |
| Pepbank | Database of peptides based on sequence text mining and public peptide data sources. |
| PeptideDB | Database of naturally occuring signalling peptide from animal resource. |
| PepX | Pepx is a structural database of protein -peptide complexes. |
| Mimodb | Database of mimotopes. |
| Hmrbase | Dataabase of hormones and their receptors. |
| MHCBN | The MHCBN is a curated database consisting of detailed information about Major Histocompatibility Complex (MHC) Binding, Non-binding peptides and T-cell epitopes. |
| BCIPEP | Database of B cell epitopes. |
| AntigenDB | Database of pathogen antigens. |
| Pepfold | Server predicting peptide structures from amino acid sequences. |
| DiscoTope | Server predicts discontinuous B cell epitopes from protein three dimensional structures. |
| ElliPro | Server for antibody and epitope prediction. |
| NetCTL | Server predicts CTL epitopes in protein sequences. |
| Epitopia | Server for detection of immunogenic regions in protein structures or sequences. |
| Cobepro | Server for predicting continous B -cell epitopes. |
| Pep-3D-search: | Server for B-cell epitope prediction based on mimotope analysis. |
| AllerTools | Webserver for predicting allergenicity and allergic cross-reactivity in proteins. |
| Pepstr | The Pepstr server predicts the tertiary structure of small peptides with sequence length varying between 7 to 25 residues. |
| Antibp | Antibp server predicts the antibacterial peptides in a protein sequence. |
| Destamp | DESTAMP is a server developed for designing highly stable antibacterial peptides. |
| Tappred | TAPPred is an on-line service for predicting binding affinity of peptides toward the TAP transporter. |
| Pcleavage | It is a SVM based method for Proteasome cleavage Prediction. |
| CTLpred | An SVM and ANN based CTL epitope prediction tool. |
| Nhlapred | It is a neural network based MHC Class-I Binding Peptide Prediction Server. |
| ABCpred | Artificial neural network based B-cell epitope prediction server. |
| BCEpred | Server for prediction of B cell epitope in antigenic sequences using physiochemical properties. |
| CBTope | Server for prediction of conformational B cell epitopes. |