Welcome to Entry Card of Peptide


Details of TopicalPdb ID 1541

PRIMARY INFORMATION
ID1541
PMID22386653
Year2012
SequenceQNPASPPEEGSPDPDSTGA
LVEEEDPFFKVPVNKLA
AAVSNFGYDLYRVRSSTS
PTTNVLLSPLSVATAL
SALSLGAEQRTESIIHR
ALYYDLISSPDIHGTYKEL
LDTVTAPQKNLKSAS
RIVFEKKLRIKSSFVAPLE
KSYGTRPRVLTGNP
RLDLQEINNWVQAQ
MKGKLARSTKEIPDEIS
ILLLGVAHFKGQWVTKF
DSRKTSLEDFYLDEER
TVRVPMMSDPKAVLR
YGLDSD
NamePEDF (Pigment epithelium-derived factor)
Length399
N-Terminal ModificationPyrrolidone carboxylic acid
C-Terminal ModificationFree
Linear/ CyclicLinear
ChiralityL
Chemical ModificationGlycosylation at 266th residue, phosphoserine at 5, 95 and 108th residue
Origin of PeptideNeurotrophic protein
Nature of Peptide/CargoIt induces extensive neuronal differentiation in retinoblastoma cells. Potent inhibitor of angiogenesis.
MechanismNeurotrophic protein
Cargo Sequence/StructureNone
Name of cargo
Not applicable
AssayVEGF and 8-OHdG Immunostaining, Measurement of corneal neo-vascularization via avidin-biotin-alkaline phosphatase kit and statistical analysis
EnhancerNone
Properties of enhancerNot applicable
Concentration1 eye drop of 1 µM thrice a day for 7 days
Incubation time7 Days
Tissue permeability (value with units)Neo-vascularized area= 22% due to PEDF (PBS=31%) or 65% of PBS on day 7(Control=4% of PBS); Oxidative stress generation, 8-OHdG level=75% of PBS (Control=50% of PBS); VEGF expression, VEGF level=71% of PBS (Control=40% of PBS)
Tissue SampleSeven week-old male Spraque–Dawley rat's right eye was used as test and left eye considered as control (PBS)
Ex vivo/In vivo/In vitroin vivo
SECONDARY INFORMATION
STRUCTURE
Predicted Structure
SMILESN.A.