Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115927 20 509 XP_006715292 20 509 NP_073728 18 1935 NP_061897 18 1935 XP_006712887 18 1935 XP_005246168 18 1935 XP_006712098 18 1935 XP_006712097 18 1935 NP_775771 17 4312 NP_001008409 17 4312 XP_006720466 17 4312 XP_005254230 17 4312 XP_006720465 17 4312 XP_005254228 17 4312 XP_006712403 17 4312 NP_001157413 16 5631 NP_848654 16 5631 NP_061152 16 7355 NP_891847 16 7355 NP_056288 16 7355 XP_006716112 16 7355 XP_005250550 16 7355 NP_001272456 15 9605 NP_001008504 15 9605 NP_001008503 15 9605 NP_001272457 15 9605 NP_001272452 15 9605 NP_001138751 15 9605 NP_001138754 15 9605 NP_001272455 15 9605 NP_001138757 15 9605 NP_000903 15 9605 NP_001138755 15 9605 NP_001138759 15 9605 NP_001008505 15 9605 NP_001272453 15 9605 NP_001138756 15 9605 NP_001138753 15 9605 NP_001138758 15 9605 NP_000905 15 9605 NP_001269833 15 9605 NP_001138752 15 9605 NP_000902 15 9605 XP_006723788 15 9605 XP_005260366 15 9605 XP_005251309 15 9605 XP_006715559 15 9605>NP_115927 Length = 1321 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 YQLIMSVF 9 YQLIMSVF Sbjct: 286 YQLIMSVF 293>XP_006715292 Length = 759 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 YQLIMSVF 9 YQLIMSVF Sbjct: 273 YQLIMSVF 280>NP_073728 Length = 1255 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YYQLIMS 7 YYQL+MS Sbjct: 154 YYQLLMS 160>NP_061897 Length = 2071 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 YQLIMSVF 9 YQL++SVF Sbjct: 1905 YQLLLSVF 1912>XP_006712887 Length = 1255 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YYQLIMS 7 YYQL+MS Sbjct: 154 YYQLLMS 160>XP_005246168 Length = 1255 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YYQLIMS 7 YYQL+MS Sbjct: 154 YYQLLMS 160>XP_006712098 Length = 2059 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 YQLIMSVF 9 YQL++SVF Sbjct: 1893 YQLLLSVF 1900>XP_006712097 Length = 2070 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 YQLIMSVF 9 YQL++SVF Sbjct: 1904 YQLLLSVF 1911>NP_775771 Length = 1244 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YQLIMSVF 9 YQL+ SVF Sbjct: 273 YQLLTSVF 280>NP_001008409 Length = 439 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YQLIMSVF 9 Y L+MSVF Sbjct: 230 YVLVMSVF 237>XP_006720466 Length = 1175 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YQLIMSVF 9 YQL+ SVF Sbjct: 204 YQLLTSVF 211>XP_005254230 Length = 1175 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YQLIMSVF 9 YQL+ SVF Sbjct: 204 YQLLTSVF 211>XP_006720465 Length = 1239 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YQLIMSVF 9 YQL+ SVF Sbjct: 268 YQLLTSVF 275>XP_005254228 Length = 1250 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YQLIMSVF 9 YQL+ SVF Sbjct: 279 YQLLTSVF 286>XP_006712403 Length = 211 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YYQLIMSVF 9 Y+QL +S+F Sbjct: 10 YFQLFVSLF 18>NP_001157413 Length = 1257 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YYQLIMS 7 YY L+MS Sbjct: 616 YYSLVMS 622>NP_848654 Length = 812 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YYQLIMS 7 YY L+MS Sbjct: 171 YYSLVMS 177>NP_061152 Length = 1858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YYQLIMSVF 9 +YQL+ SV+ Sbjct: 876 FYQLLDSVY 884>NP_891847 Length = 1858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YYQLIMSVF 9 +YQL+ SV+ Sbjct: 876 FYQLLDSVY 884>NP_056288 Length = 2046 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YQLIMSVF 9 YQL+ S+F Sbjct: 1879 YQLLHSIF 1886>XP_006716112 Length = 1816 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YYQLIMSVF 9 +YQL+ SV+ Sbjct: 876 FYQLLDSVY 884>XP_005250550 Length = 1858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YYQLIMSVF 9 +YQL+ SV+ Sbjct: 876 FYQLLDSVY 884>NP_001272456 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 50 YYNMFTSIF 58>NP_001008504 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 150 YYNMFTSIF 158>NP_001008503 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 150 YYNMFTSIF 158>NP_001272457 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 50 YYNMFTSIF 58>NP_001272452 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 150 YYNMFTSIF 158>NP_001138751 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 243 YYNMFTSIF 251>NP_001138754 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 150 YYNMFTSIF 158>NP_001272455 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 50 YYNMFTSIF 58>NP_001138757 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 150 YYNMFTSIF 158>NP_000903 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 139 YYNMFTSIF 147>NP_001138755 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 150 YYNMFTSIF 158>NP_001138759 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 50 YYNMFTSIF 58>NP_001008505 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 150 YYNMFTSIF 158>NP_001272453 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 243 YYNMFTSIF 251>NP_001138756 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 150 YYNMFTSIF 158>NP_001138753 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 69 YYNMFTSIF 77>NP_001138758 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 150 YYNMFTSIF 158>NP_000905 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 150 YYNMFTSIF 158>NP_001269833 Length = 291 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 50 YYNMFTSIF 58>NP_001138752 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 50 YYNMFTSIF 58>NP_000902 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 129 YYNMFTSIF 137>XP_006723788 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YQLIMSVF 9 Y L+MS+F Sbjct: 180 YVLVMSMF 187>XP_005260366 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YQLIMSVF 9 Y L+MS+F Sbjct: 212 YVLVMSMF 219>XP_005251309 Length = 366 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 125 YYNMFTSIF 133>XP_006715559 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 YYQLIMSVF 9 YY + S+F Sbjct: 243 YYNMFTSIF 251Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.347 0.152 0.449 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 338,313 Number of extensions: 459 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |