Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Submit a protein/antigen


In this tool user has to provide a mutated protein sequence of cancer cell line/patient. On comparision with the human proteome with given RefSeq ID (optional) OR searching human proteome for best BLAST hit, we will identify the cancer specific mutation and possible immune epitopes for the query protein sequence. For more information click HERE.


Paste a mutated protein sequence from cancer sample, in FASTA format


OR
Upload Sequence file          

    

Type RefSeq Protein ID of protein against which you want to compare (Optional)

         

Select Epitope Types to be Displayed:

  MHC-I Binders         MHC-II Binders           Cytotoxic T-Cell Epitopes     Linear B-Cell Epitopes       All

                 

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package