Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 22 103 NP_001263689 22 103 NP_001119584 22 103 NP_001119586 22 103 NP_001263625 22 103 NP_001119590 22 103 NP_001263690 22 103 NP_001119585 22 103 NP_001263624 22 103 NP_001243624 17 3301 XP_006714533 17 3301 XP_005248344 17 3301 NP_277019 17 3301 NP_071433 17 3301 NP_066553 17 3301 NP_036308 17 3301 NP_001619 16 5631 NP_115971 16 5631 XP_005250291 16 5631 NP_001007279 16 7355 NP_434698 16 7355 NP_998755 16 7355 NP_005789 16 7355 NP_055855 15 9605 NP_003165 15 9605 NP_068506 15 9605 NP_001098998 15 9605 NP_945346 15 9605 NP_003624 15 9605 NP_001243503 15 9605 NP_001243505 15 9605 NP_004720 15 9605 NP_001164607 15 9605 NP_001164606 15 9605 NP_001243504 15 9605 NP_001156896 15 9605 NP_443152 15 9605 XP_006717559 15 9605 XP_006717558 15 9605 XP_006717557 15 9605 XP_006717556 15 9605 XP_005252630 15 9605 XP_005252629 15 9605 XP_005252628 15 9605 XP_005252627 15 9605 XP_005252626 15 9605 XP_005252625 15 9605 XP_005252624 15 9605 XP_005252623 15 9605 XP_005252622 15 9605 XP_006717555 15 9605 XP_005252621 15 9605 XP_006712426 15 9605 XP_006712425 15 9605 XP_006712424 15 9605 XP_006711992 15 9605 NP_612209 15 9605 NP_002931 15 9605 NP_001035809 15 9605>NP_000537 Length = 393 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YSPAVNKMF 9 YSPA+NKMF Sbjct: 126 YSPALNKMF 134>NP_001263689 Length = 354 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YSPAVNKMF 9 YSPA+NKMF Sbjct: 87 YSPALNKMF 95>NP_001119584 Length = 393 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YSPAVNKMF 9 YSPA+NKMF Sbjct: 126 YSPALNKMF 134>NP_001119586 Length = 341 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YSPAVNKMF 9 YSPA+NKMF Sbjct: 126 YSPALNKMF 134>NP_001263625 Length = 302 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YSPAVNKMF 9 YSPA+NKMF Sbjct: 87 YSPALNKMF 95>NP_001119590 Length = 354 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YSPAVNKMF 9 YSPA+NKMF Sbjct: 87 YSPALNKMF 95>NP_001263690 Length = 354 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YSPAVNKMF 9 YSPA+NKMF Sbjct: 87 YSPALNKMF 95>NP_001119585 Length = 346 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YSPAVNKMF 9 YSPA+NKMF Sbjct: 126 YSPALNKMF 134>NP_001263624 Length = 307 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YSPAVNKMF 9 YSPA+NKMF Sbjct: 87 YSPALNKMF 95>NP_001243624 Length = 1177 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YSPAVNKMF 9 YSP +N+M+ Sbjct: 520 YSPTLNEMW 528>XP_006714533 Length = 243 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YSPAVNKMF 9 ++ AVNKMF Sbjct: 107 HTSAVNKMF 115>XP_005248344 Length = 305 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YSPAVNKMF 9 ++ AVNKMF Sbjct: 251 HTSAVNKMF 259>NP_277019 Length = 307 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YSPAVNKMF 9 ++ AVNKMF Sbjct: 251 HTSAVNKMF 259>NP_071433 Length = 196 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SPAVNKM 8 +PAVNKM Sbjct: 75 TPAVNKM 81>NP_066553 Length = 473 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YSPAVNK 7 Y PAVNK Sbjct: 86 YPPAVNK 92>NP_036308 Length = 387 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YSPAVNKMF 9 ++ AVNKMF Sbjct: 251 HTSAVNKMF 259>NP_001619 Length = 316 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YSPAVNKM 8 Y PAVN++ Sbjct: 178 YKPAVNQI 185>NP_115971 Length = 1604 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SPAVNKMF 9 SP+ N+MF Sbjct: 1017 SPSTNEMF 1024>XP_005250291 Length = 172 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YSPAVNKM 8 Y PAVN++ Sbjct: 34 YKPAVNQI 41>NP_001007279 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 YSPAVNKM 8 Y P +NK+ Sbjct: 218 YDPEINKL 225>NP_434698 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 YSPAVNKM 8 Y P +NK+ Sbjct: 215 YDPEINKL 222>NP_998755 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 YSPAVNKM 8 Y P +NK+ Sbjct: 215 YDPEINKL 222>NP_005789 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 YSPAVNKM 8 Y P +NK+ Sbjct: 215 YDPEINKL 222>NP_055855 Length = 2098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YSPAVNKMF 9 +SP +NK F Sbjct: 1087 WSPLLNKEF 1095>NP_003165 Length = 1788 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 445 FSPAVN 450>NP_068506 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 871 FSPAVN 876>NP_001098998 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SPAVNKM 8 +P VNKM Sbjct: 93 APCVNKM 99>NP_945346 Length = 829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SPAVNKM 8 +P VNKM Sbjct: 93 APCVNKM 99>NP_003624 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 1 YSPAVNK 7 Y P +NK Sbjct: 417 YDPTINK 423>NP_001243503 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 1 YSPAVNK 7 Y P +NK Sbjct: 417 YDPTINK 423>NP_001243505 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 1 YSPAVNK 7 Y P +NK Sbjct: 344 YDPTINK 350>NP_004720 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YSPAVNKMF 9 Y PA +K+F Sbjct: 513 YRPAEDKIF 521>NP_001164607 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YSPAVNKMF 9 Y PA +K+F Sbjct: 513 YRPAEDKIF 521>NP_001164606 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YSPAVNKMF 9 Y PA +K+F Sbjct: 513 YRPAEDKIF 521>NP_001243504 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 1 YSPAVNK 7 Y P +NK Sbjct: 417 YDPTINK 423>NP_001156896 Length = 57 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PAVNKMF 9 PAV++MF Sbjct: 3 PAVDEMF 9>NP_443152 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 172 FSPAVN 177>XP_006717559 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 523 FSPAVN 528>XP_006717558 Length = 1908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 523 FSPAVN 528>XP_006717557 Length = 1940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 555 FSPAVN 560>XP_006717556 Length = 2024 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 639 FSPAVN 644>XP_005252630 Length = 2256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 871 FSPAVN 876>XP_005252629 Length = 2256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 871 FSPAVN 876>XP_005252628 Length = 2256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 871 FSPAVN 876>XP_005252627 Length = 2256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 871 FSPAVN 876>XP_005252626 Length = 2260 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 917 FSPAVN 922>XP_005252625 Length = 2277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 892 FSPAVN 897>XP_005252624 Length = 2292 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 949 FSPAVN 954>XP_005252623 Length = 2302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 917 FSPAVN 922>XP_005252622 Length = 2308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 949 FSPAVN 954>XP_006717555 Length = 2328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 943 FSPAVN 948>XP_005252621 Length = 2334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 949 FSPAVN 954>XP_006712426 Length = 1237 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YSPAVNKMF 9 +SP +NK F Sbjct: 393 WSPLLNKEF 401>XP_006712425 Length = 1349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YSPAVNKMF 9 +SP +NK F Sbjct: 393 WSPLLNKEF 401>XP_006712424 Length = 1376 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YSPAVNKMF 9 +SP +NK F Sbjct: 393 WSPLLNKEF 401>XP_006711992 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YSPAVN 6 +SPAVN Sbjct: 172 FSPAVN 177>NP_612209 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PAVNKMF 9 PAV++MF Sbjct: 24 PAVDEMF 30>NP_002931 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 YSPAVNKM 8 Y P +NK+ Sbjct: 573 YRPRINKL 580>NP_001035809 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 YSPAVNKM 8 Y P +NK+ Sbjct: 573 YRPRINKL 580Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.131 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 640,272 Number of extensions: 801 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |