Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000537                                                              22     134
NP_001263689                                                           22     134
NP_001119584                                                           22     134
NP_001119586                                                           22     134
NP_001263625                                                           22     134
NP_001119590                                                           22     134
NP_001263690                                                           22     134
NP_001119585                                                           22     134
NP_001263624                                                           22     134
NP_001243624                                                           20     509
NP_115971                                                              17    2528
NP_003790                                                              17    4312
XP_005258219                                                           17    4312
XP_006722424                                                           17    4312
XP_005258217                                                           17    4312
NP_683705                                                              16    5631
NP_683704                                                              16    5631
NP_078862                                                              16    5631
NP_683706                                                              16    5631
NP_683707                                                              16    5631
NP_001139659                                                           16    5631
NP_001139658                                                           16    5631
NP_001139656                                                           16    5631
NP_006201                                                              16    5631
NP_001139657                                                           16    5631
NP_683703                                                              16    5631
NP_683702                                                              16    5631
NP_291020                                                              16    5631
NP_001184058                                                           16    5631
XP_006710389                                                           16    5631
XP_006710388                                                           16    5631
XP_006710387                                                           16    5631
XP_006710386                                                           16    5631
XP_006710385                                                           16    5631
XP_006710384                                                           16    5631
XP_006710383                                                           16    5631
XP_006710382                                                           16    5631
XP_006710381                                                           16    5631
NP_001093261                                                           16    5631
NP_001138679                                                           16    7355
NP_004622                                                              16    7355
NP_150643                                                              16    7355
NP_001156896                                                           16    7355
NP_056502                                                              16    7355
NP_001276916                                                           16    7355
XP_005248772                                                           16    7355
XP_005248771                                                           16    7355
XP_005248770                                                           16    7355
XP_005271232                                                           16    7355
XP_005271231                                                           16    7355
XP_006710945                                                           16    7355
XP_005271230                                                           16    7355
XP_006710442                                                           16    7355
XP_005270555                                                           16    7355
NP_612209                                                              16    7355
NP_001106819                                                           15    9605
NP_001106820                                                           15    9605
NP_001388                                                              15    9605
NP_001106818                                                           15    9605
NP_000121                                                              15    9605
NP_001619                                                              15    9605
NP_796376                                                              15    9605
NP_001129976                                                           15    9605
NP_003782                                                              15    9605
NP_001099038                                                           15    9605
NP_056069                                                              15    9605
NP_073751                                                              15    9605
NP_001099037                                                           15    9605
NP_001099036                                                           15    9605
NP_071396                                                              15    9605
NP_932348                                                              15    9605
NP_115606                                                              15    9605
NP_003239                                                              15    9605
NP_001003760                                                           15    9605
XP_005258190                                                           15    9605
XP_005258189                                                           15    9605
XP_006722402                                                           15    9605
XP_005256402                                                           15    9605
XP_006722342                                                           15    9605
XP_006719699                                                           15    9605
XP_005269241                                                           15    9605
XP_006716380                                                           15    9605
XP_006716379                                                           15    9605
XP_005273516                                                           15    9605
XP_005273515                                                           15    9605
XP_005250291                                                           15    9605
XP_006715230                                                           15    9605
XP_006715229                                                           15    9605
XP_005249350                                                           15    9605
XP_005249349                                                           15    9605
XP_005249348                                                           15    9605
XP_005249347                                                           15    9605
XP_005249346                                                           15    9605
XP_005249164                                                           15    9605
XP_006710461                                                           15    9605
>NP_000537
          Length = 393

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   YSPALNEMF 9
           YSPALN+MF
Sbjct: 126 YSPALNKMF 134
>NP_001263689
          Length = 354

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  YSPALNEMF 9
          YSPALN+MF
Sbjct: 87 YSPALNKMF 95
>NP_001119584
          Length = 393

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   YSPALNEMF 9
           YSPALN+MF
Sbjct: 126 YSPALNKMF 134
>NP_001119586
          Length = 341

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   YSPALNEMF 9
           YSPALN+MF
Sbjct: 126 YSPALNKMF 134
>NP_001263625
          Length = 302

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  YSPALNEMF 9
          YSPALN+MF
Sbjct: 87 YSPALNKMF 95
>NP_001119590
          Length = 354

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  YSPALNEMF 9
          YSPALN+MF
Sbjct: 87 YSPALNKMF 95
>NP_001263690
          Length = 354

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  YSPALNEMF 9
          YSPALN+MF
Sbjct: 87 YSPALNKMF 95
>NP_001119585
          Length = 346

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   YSPALNEMF 9
           YSPALN+MF
Sbjct: 126 YSPALNKMF 134
>NP_001263624
          Length = 307

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  YSPALNEMF 9
          YSPALN+MF
Sbjct: 87 YSPALNKMF 95
>NP_001243624
          Length = 1177

 Score = 19.6 bits (39), Expect =   509
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   YSPALNEMF 9
           YSP LNEM+
Sbjct: 520 YSPTLNEMW 528
>NP_115971
          Length = 1604

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    SPALNEMF 9
            SP+ NEMF
Sbjct: 1017 SPSTNEMF 1024
>NP_003790
          Length = 476

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   YSPALNEM 8
           Y P LNEM
Sbjct: 374 YFPLLNEM 381
>XP_005258219
          Length = 476

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   YSPALNEM 8
           Y P LNEM
Sbjct: 374 YFPLLNEM 381
>XP_006722424
          Length = 504

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   YSPALNEM 8
           Y P LNEM
Sbjct: 374 YFPLLNEM 381
>XP_005258217
          Length = 504

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   YSPALNEM 8
           Y P LNEM
Sbjct: 374 YFPLLNEM 381
>NP_683705
          Length = 626

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   YSPALNEMF 9
           Y+P L E+F
Sbjct: 344 YNPILGEIF 352
>NP_683704
          Length = 719

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   YSPALNEMF 9
           Y+P L E+F
Sbjct: 437 YNPILGEIF 445
>NP_078862
          Length = 736

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   YSPALNEMF 9
           Y+P L E+F
Sbjct: 454 YNPILGEIF 462
>NP_683706
          Length = 723

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   YSPALNEMF 9
           Y+P L E+F
Sbjct: 441 YNPILGEIF 449
>NP_683707
          Length = 746

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   YSPALNEMF 9
           Y+P L E+F
Sbjct: 464 YNPILGEIF 472
>NP_001139659
          Length = 1464

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   SPALNE 7
           SPALNE
Sbjct: 487 SPALNE 492
>NP_001139658
          Length = 1588

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   SPALNE 7
           SPALNE
Sbjct: 611 SPALNE 616
>NP_001139656
          Length = 1588

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   SPALNE 7
           SPALNE
Sbjct: 611 SPALNE 616
>NP_006201
          Length = 1588

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   SPALNE 7
           SPALNE
Sbjct: 611 SPALNE 616
>NP_001139657
          Length = 1462

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   SPALNE 7
           SPALNE
Sbjct: 485 SPALNE 490
>NP_683703
          Length = 558

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   YSPALNEMF 9
           Y+P L E+F
Sbjct: 276 YNPILGEIF 284
>NP_683702
          Length = 558

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   YSPALNEMF 9
           Y+P L E+F
Sbjct: 276 YNPILGEIF 284
>NP_291020
          Length = 156

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2  SPALNEMF 9
          SP+L++MF
Sbjct: 44 SPSLDQMF 51
>NP_001184058
          Length = 156

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2  SPALNEMF 9
          SP+L++MF
Sbjct: 44 SPSLDQMF 51
>XP_006710389
          Length = 558

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   YSPALNEMF 9
           Y+P L E+F
Sbjct: 276 YNPILGEIF 284
>XP_006710388
          Length = 558

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   YSPALNEMF 9
           Y+P L E+F
Sbjct: 276 YNPILGEIF 284
>XP_006710387
          Length = 558

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   YSPALNEMF 9
           Y+P L E+F
Sbjct: 276 YNPILGEIF 284
>XP_006710386
          Length = 571

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   YSPALNEMF 9
           Y+P L E+F
Sbjct: 289 YNPILGEIF 297
>XP_006710385
          Length = 571

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   YSPALNEMF 9
           Y+P L E+F
Sbjct: 289 YNPILGEIF 297
>XP_006710384
          Length = 629

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   YSPALNEMF 9
           Y+P L E+F
Sbjct: 347 YNPILGEIF 355
>XP_006710383
          Length = 639

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   YSPALNEMF 9
           Y+P L E+F
Sbjct: 357 YNPILGEIF 365
>XP_006710382
          Length = 713

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   YSPALNEMF 9
           Y+P L E+F
Sbjct: 431 YNPILGEIF 439
>XP_006710381
          Length = 726

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   YSPALNEMF 9
           Y+P L E+F
Sbjct: 444 YNPILGEIF 452
>NP_001093261
          Length = 76

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2  SPALNEMF 9
          SP+L++MF
Sbjct: 44 SPSLDQMF 51
>NP_001138679
          Length = 632

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SPALNEMF 9
           SP+L E+F
Sbjct: 373 SPSLTELF 380
>NP_004622
          Length = 963

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SPALNEMF 9
           +PAL E+F
Sbjct: 917 APALKELF 924
>NP_150643
          Length = 793

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SPALNEMF 9
           +PAL E+F
Sbjct: 747 APALKELF 754
>NP_001156896
          Length = 57

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3 PALNEMF 9
         PA++EMF
Sbjct: 3 PAVDEMF 9
>NP_056502
          Length = 1213

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   YSPALNEM 8
           Y PA NE+
Sbjct: 856 YPPAANEL 863
>NP_001276916
          Length = 1216

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   YSPALNEM 8
           Y PA NE+
Sbjct: 859 YPPAANEL 866
>XP_005248772
          Length = 1154

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   YSPALNEM 8
           Y PA NE+
Sbjct: 856 YPPAANEL 863
>XP_005248771
          Length = 1177

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   YSPALNEM 8
           Y PA NE+
Sbjct: 856 YPPAANEL 863
>XP_005248770
          Length = 1213

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   YSPALNEM 8
           Y PA NE+
Sbjct: 856 YPPAANEL 863
>XP_005271232
          Length = 834

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SPALNEMF 9
           +PAL E+F
Sbjct: 788 APALKELF 795
>XP_005271231
          Length = 847

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SPALNEMF 9
           +PAL E+F
Sbjct: 801 APALKELF 808
>XP_006710945
          Length = 901

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SPALNEMF 9
           +PAL E+F
Sbjct: 855 APALKELF 862
>XP_005271230
          Length = 976

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SPALNEMF 9
           +PAL E+F
Sbjct: 930 APALKELF 937
>XP_006710442
          Length = 285

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   PALNEMF 9
           P LNE+F
Sbjct: 222 PTLNEIF 228
>XP_005270555
          Length = 317

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   PALNEMF 9
           P LNE+F
Sbjct: 254 PTLNEIF 260
>NP_612209
          Length = 252

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  PALNEMF 9
          PA++EMF
Sbjct: 24 PAVDEMF 30
>NP_001106819
          Length = 754

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   YSPALNEM 8
           YSP  NE+
Sbjct: 553 YSPTKNEI 560
>NP_001106820
          Length = 767

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   YSPALNEM 8
           YSP  NE+
Sbjct: 566 YSPTKNEI 573
>NP_001388
          Length = 770

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   YSPALNEM 8
           YSP  NE+
Sbjct: 569 YSPTKNEI 576
>NP_001106818
          Length = 758

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   YSPALNEM 8
           YSP  NE+
Sbjct: 557 YSPTKNEI 564
>NP_000121
          Length = 2224

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    SPALNEMF 9
            SP LN+ F
Sbjct: 1495 SPTLNDTF 1502
>NP_001619
          Length = 316

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   YSPALNEM 8
           Y PA+N++
Sbjct: 178 YKPAVNQI 185
>NP_796376
          Length = 419

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   SPALNEMF 9
           +PA NE F
Sbjct: 201 NPAFNETF 208
>NP_001129976
          Length = 419

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   SPALNEMF 9
           +PA NE F
Sbjct: 201 NPAFNETF 208
>NP_003782
          Length = 1052

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           PALNE+
Sbjct: 756 PALNEL 761
>NP_001099038
          Length = 1749

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           PALNE+
Sbjct: 456 PALNEL 461
>NP_056069
          Length = 1826

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           PALNE+
Sbjct: 457 PALNEL 462
>NP_073751
          Length = 472

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           P+LNEM
Sbjct: 209 PSLNEM 214
>NP_001099037
          Length = 1757

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           PALNE+
Sbjct: 456 PALNEL 461
>NP_001099036
          Length = 1770

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           PALNE+
Sbjct: 456 PALNEL 461
>NP_071396
          Length = 1805

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           PALNE+
Sbjct: 456 PALNEL 461
>NP_932348
          Length = 915

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  PALNEM 8
          PALNE+
Sbjct: 8  PALNEL 13
>NP_115606
          Length = 603

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 1   YSPALNEM 8
           Y P +NE+
Sbjct: 537 YKPRMNEL 544
>NP_003239
          Length = 961

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 3  PALNEMF 9
          PALN+++
Sbjct: 53 PALNDLY 59
>NP_001003760
          Length = 634

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   YSPALNE 7
           +SP LNE
Sbjct: 587 FSPELNE 593
>XP_005258190
          Length = 325

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  PALNEM 8
          P+LNEM
Sbjct: 62 PSLNEM 67
>XP_005258189
          Length = 360

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           P+LNEM
Sbjct: 209 PSLNEM 214
>XP_006722402
          Length = 419

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           P+LNEM
Sbjct: 209 PSLNEM 214
>XP_005256402
          Length = 751

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  PALNEM 8
          PALNE+
Sbjct: 8  PALNEL 13
>XP_006722342
          Length = 762

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  PALNEM 8
          PALNE+
Sbjct: 19 PALNEL 24
>XP_006719699
          Length = 516

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 1   YSPALNEM 8
           Y P +NE+
Sbjct: 450 YKPRMNEL 457
>XP_005269241
          Length = 547

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 1   YSPALNEM 8
           Y P +NE+
Sbjct: 481 YKPRMNEL 488
>XP_006716380
          Length = 1762

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           PALNE+
Sbjct: 393 PALNEL 398
>XP_006716379
          Length = 1762

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           PALNE+
Sbjct: 393 PALNEL 398
>XP_005273516
          Length = 1762

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           PALNE+
Sbjct: 393 PALNEL 398
>XP_005273515
          Length = 1805

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           PALNE+
Sbjct: 457 PALNEL 462
>XP_005250291
          Length = 172

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1  YSPALNEM 8
          Y PA+N++
Sbjct: 34 YKPAVNQI 41
>XP_006715230
          Length = 1734

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           PALNE+
Sbjct: 345 PALNEL 350
>XP_006715229
          Length = 1782

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           PALNE+
Sbjct: 393 PALNEL 398
>XP_005249350
          Length = 1810

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           PALNE+
Sbjct: 456 PALNEL 461
>XP_005249349
          Length = 1824

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           PALNE+
Sbjct: 456 PALNEL 461
>XP_005249348
          Length = 1832

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           PALNE+
Sbjct: 456 PALNEL 461
>XP_005249347
          Length = 1837

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           PALNE+
Sbjct: 456 PALNEL 461
>XP_005249346
          Length = 1845

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   PALNEM 8
           PALNE+
Sbjct: 456 PALNEL 461
>XP_005249164
          Length = 634

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   YSPALNE 7
           +SP LNE
Sbjct: 587 FSPELNE 593
>XP_006710461
          Length = 753

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   YSPALNEM 8
           YSP  NE+
Sbjct: 552 YSPTKNEI 559
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.320    0.133    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 646,938
Number of extensions: 972
Number of successful extensions: 95
Number of sequences better than 10000.0: 95
Number of HSP's gapped: 95
Number of HSP's successfully gapped: 95
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.9 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package