Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001120690 20 509 NP_006221 20 509 NP_001243808 20 509 XP_006715808 20 509 XP_005249931 17 4312 XP_005249930 17 4312 XP_005249928 17 4312 NP_002970 16 7355 NP_775792 16 7355 NP_653292 16 7355 NP_001074020 16 7355 NP_001007099 16 7355 NP_001180529 16 7355 XP_006717039 16 7355 XP_006717038 16 7355 XP_005251795 16 7355 XP_006717037 16 7355 XP_005271161 16 7355 XP_005271160 16 7355 NP_000956 15 9605 NP_001277206 15 9605 NP_000020 15 9605 NP_001092882 15 9605 NP_006757 15 9605 NP_001092883 15 9605 NP_001263180 15 9605 NP_056243 15 9605 NP_001273700 15 9605 NP_444514 15 9605 NP_115593 15 9605 NP_004361 15 9605 NP_001006657 15 9605 NP_942592 15 9605 XP_005273706 15 9605 XP_006715397 15 9605 XP_005265728 15 9605 XP_005265724 15 9605 XP_006712378 15 9605 XP_005263945 15 9605 XP_006712376 15 9605 XP_006712375 15 9605 XP_006712374 15 9605 XP_006712371 15 9605>NP_001120690 Length = 469 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 YSATQSACL 9 +SATQ+ACL Sbjct: 431 FSATQTACL 439>NP_006221 Length = 504 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 YSATQSACL 9 +SATQ+ACL Sbjct: 466 FSATQTACL 474>NP_001243808 Length = 469 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 YSATQSACL 9 +SATQ+ACL Sbjct: 431 FSATQTACL 439>XP_006715808 Length = 488 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 YSATQSACL 9 +SATQ+ACL Sbjct: 450 FSATQTACL 458>XP_005249931 Length = 862 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SATQSACL 9 +ATQS CL Sbjct: 50 NATQSQCL 57>XP_005249930 Length = 888 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SATQSACL 9 +ATQS CL Sbjct: 50 NATQSQCL 57>XP_005249928 Length = 897 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SATQSACL 9 +ATQS CL Sbjct: 50 NATQSQCL 57>NP_002970 Length = 547 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSATQSACL 9 YSA AC+ Sbjct: 54 YSAVDQACV 62>NP_775792 Length = 1444 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSATQSAC 8 Y A Q+AC Sbjct: 1312 YGAQQTAC 1319>NP_653292 Length = 719 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YSATQSACL 9 Y A ++ACL Sbjct: 32 YEAIRAACL 40>NP_001074020 Length = 1405 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSATQSAC 8 Y A Q+AC Sbjct: 1273 YGAQQTAC 1280>NP_001007099 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSATQSACL 9 YSA AC+ Sbjct: 54 YSAVDQACV 62>NP_001180529 Length = 503 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSATQSACL 9 YSA AC+ Sbjct: 54 YSAVDQACV 62>XP_006717039 Length = 1370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSATQSAC 8 Y A Q+AC Sbjct: 1238 YGAQQTAC 1245>XP_006717038 Length = 1473 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSATQSAC 8 Y A Q+AC Sbjct: 1341 YGAQQTAC 1348>XP_005251795 Length = 1508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSATQSAC 8 Y A Q+AC Sbjct: 1376 YGAQQTAC 1383>XP_006717037 Length = 1508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSATQSAC 8 Y A Q+AC Sbjct: 1376 YGAQQTAC 1383>XP_005271161 Length = 366 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSATQSACL 9 YSA AC+ Sbjct: 54 YSAVDQACV 62>XP_005271160 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSATQSACL 9 YSA AC+ Sbjct: 54 YSAVDQACV 62>NP_000956 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YSATQSACL 9 Y+A+ S+C+ Sbjct: 19 YTASPSSCM 27>NP_001277206 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YSATQSACL 9 Y+A+ S+C+ Sbjct: 19 YTASPSSCM 27>NP_000020 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TQSACL 9 T+SACL Sbjct: 337 TESACL 342>NP_001092882 Length = 2004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SATQSACL 9 S TQS+C+ Sbjct: 1597 SLTQSSCV 1604>NP_006757 Length = 2004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SATQSACL 9 S TQS+C+ Sbjct: 1597 SLTQSSCV 1604>NP_001092883 Length = 2004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SATQSACL 9 S TQS+C+ Sbjct: 1597 SLTQSSCV 1604>NP_001263180 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SATQSACL 9 S+TQ CL Sbjct: 11 SSTQEGCL 18>NP_056243 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TQSACL 9 TQS+CL Sbjct: 768 TQSSCL 773>NP_001273700 Length = 2490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ATQSAC 8 +TQSAC Sbjct: 2112 STQSAC 2117>NP_444514 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 YSATQSAC 8 Y A Q AC Sbjct: 344 YEACQQAC 351>NP_115593 Length = 2603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ATQSAC 8 +TQSAC Sbjct: 2225 STQSAC 2230>NP_004361 Length = 3063 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSATQSACL 9 + TQS CL Sbjct: 610 FELTQSICL 618>NP_001006657 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TQSACL 9 TQS+CL Sbjct: 768 TQSSCL 773>NP_942592 Length = 2352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ATQSAC 8 +TQSAC Sbjct: 1974 STQSAC 1979>XP_005273706 Length = 1997 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SATQSACL 9 S TQS+C+ Sbjct: 1590 SLTQSSCV 1597>XP_006715397 Length = 2972 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSATQSACL 9 + TQS CL Sbjct: 610 FELTQSICL 618>XP_005265728 Length = 2351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ATQSAC 8 +TQSAC Sbjct: 1973 STQSAC 1978>XP_005265724 Length = 2602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ATQSAC 8 +TQSAC Sbjct: 2224 STQSAC 2229>XP_006712378 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ATQSAC 8 ATQS+C Sbjct: 635 ATQSSC 640>XP_005263945 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ATQSAC 8 ATQS+C Sbjct: 635 ATQSSC 640>XP_006712376 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ATQSAC 8 ATQS+C Sbjct: 641 ATQSSC 646>XP_006712375 Length = 685 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ATQSAC 8 ATQS+C Sbjct: 641 ATQSSC 646>XP_006712374 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ATQSAC 8 ATQS+C Sbjct: 685 ATQSSC 690>XP_006712371 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ATQSAC 8 ATQS+C Sbjct: 685 ATQSSC 690Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.111 0.329 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 468,071 Number of extensions: 862 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |