Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000542 19 869 NP_937799 19 869 NP_001006635 17 2528 NP_060524 17 2528 XP_006721123 17 2528 XP_005255471 17 2528 XP_006721121 17 2528 XP_005255470 17 2528 XP_006721120 17 2528 NP_001229813 17 4312 NP_001274533 17 4312 NP_001274532 17 4312 NP_003434 17 4312 XP_005246044 17 4312 XP_005246043 17 4312 NP_066264 16 5631 NP_001136401 16 5631 NP_065574 16 5631 NP_001136405 16 5631 NP_001136406 16 5631 NP_066266 16 5631 NP_066265 16 5631 NP_001230280 16 5631 NP_057202 16 5631 NP_055736 16 5631 NP_001008701 16 5631 XP_005259876 16 5631 XP_006722752 16 5631 XP_005259875 16 5631 XP_006722751 16 5631 XP_005250068 16 5631 XP_005250067 16 5631 NP_005199 16 7355 NP_004704 16 7355 NP_114141 16 7355 XP_006721769 16 7355 XP_005268258 16 7355 XP_005268257 16 7355 XP_005268256 16 7355 NP_060391 15 9605 NP_001153517 15 9605 NP_005260 15 9605 NP_001161081 15 9605 NP_006495 15 9605 NP_002204 15 9605 NP_001131022 15 9605 NP_001157945 15 9605 NP_060207 15 9605 NP_001020119 15 9605 XP_005268856 15 9605 XP_006717995 15 9605 XP_005252749 15 9605 XP_005252748 15 9605 XP_006713693 15 9605 XP_005247493 15 9605 XP_006712913 15 9605 XP_005246199 15 9605 XP_005246198 15 9605 XP_005246197 15 9605 XP_005246196 15 9605 XP_005246195 15 9605 XP_005246194 15 9605 XP_006710770 15 9605 NP_569119 15 9605 NP_001131023 15 9605>NP_000542 Length = 213 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YRRLDNVRS 9 YRRLD VRS Sbjct: 175 YRRLDIVRS 183>NP_937799 Length = 172 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YRRLDNVRS 9 YRRLD VRS Sbjct: 134 YRRLDIVRS 142>NP_001006635 Length = 881 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RRLDNVRS 9 RRLD VRS Sbjct: 34 RRLDTVRS 41>NP_060524 Length = 803 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RRLDNVRS 9 RRLD VRS Sbjct: 34 RRLDTVRS 41>XP_006721123 Length = 775 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RRLDNVRS 9 RRLD VRS Sbjct: 34 RRLDTVRS 41>XP_005255471 Length = 840 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RRLDNVRS 9 RRLD VRS Sbjct: 34 RRLDTVRS 41>XP_006721121 Length = 853 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RRLDNVRS 9 RRLD VRS Sbjct: 34 RRLDTVRS 41>XP_005255470 Length = 853 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RRLDNVRS 9 RRLD VRS Sbjct: 34 RRLDTVRS 41>XP_006721120 Length = 880 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RRLDNVRS 9 RRLD VRS Sbjct: 33 RRLDTVRS 40>NP_001229813 Length = 721 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YRRLDNVRS 9 + R+DN+RS Sbjct: 541 FNRVDNLRS 549>NP_001274533 Length = 727 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YRRLDNVRS 9 + R+DN+RS Sbjct: 547 FNRVDNLRS 555>NP_001274532 Length = 810 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YRRLDNVRS 9 + R+DN+RS Sbjct: 623 FNRVDNLRS 631>NP_003434 Length = 803 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YRRLDNVRS 9 + R+DN+RS Sbjct: 623 FNRVDNLRS 631>XP_005246044 Length = 734 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YRRLDNVRS 9 + R+DN+RS Sbjct: 547 FNRVDNLRS 555>XP_005246043 Length = 747 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YRRLDNVRS 9 + R+DN+RS Sbjct: 560 FNRVDNLRS 568>NP_066264 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 R+DN+RS Sbjct: 448 RVDNIRS 454>NP_001136401 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 R+DN+RS Sbjct: 448 RVDNIRS 454>NP_065574 Length = 748 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 R+DN+RS Sbjct: 566 RVDNIRS 572>NP_001136405 Length = 666 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 R+DN+RS Sbjct: 484 RVDNIRS 490>NP_001136406 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 R+DN+RS Sbjct: 448 RVDNIRS 454>NP_066266 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 R+DN+RS Sbjct: 448 RVDNIRS 454>NP_066265 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 R+DN+RS Sbjct: 448 RVDNIRS 454>NP_001230280 Length = 639 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRLDNVR 8 RRL+N+R Sbjct: 455 RRLENIR 461>NP_057202 Length = 625 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRLDNVR 8 RRL+N+R Sbjct: 455 RRLENIR 461>NP_055736 Length = 1469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 RLDN++S Sbjct: 1037 RLDNIKS 1043>NP_001008701 Length = 1474 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 RLDN++S Sbjct: 1042 RLDNIKS 1048>XP_005259876 Length = 1498 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 RLDN++S Sbjct: 1042 RLDNIKS 1048>XP_006722752 Length = 1462 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 RLDN++S Sbjct: 1006 RLDNIKS 1012>XP_005259875 Length = 1493 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 RLDN++S Sbjct: 1037 RLDNIKS 1043>XP_006722751 Length = 1498 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 RLDN++S Sbjct: 1042 RLDNIKS 1048>XP_005250068 Length = 615 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRLDNVR 8 RRL+N+R Sbjct: 431 RRLENIR 437>XP_005250067 Length = 638 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRLDNVR 8 RRL+N+R Sbjct: 454 RRLENIR 460>NP_005199 Length = 215 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRLDNVRS 9 R DNVRS Sbjct: 58 RSFDNVRS 65>NP_004704 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRLDNVR 8 ++LDNVR Sbjct: 321 KKLDNVR 327>NP_114141 Length = 5635 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YRRLDNV 7 +RRLDN+ Sbjct: 826 WRRLDNM 832>XP_006721769 Length = 229 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRLDNVRS 9 R DNVRS Sbjct: 72 RSFDNVRS 79>XP_005268258 Length = 847 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRLDNVR 8 ++LDNVR Sbjct: 92 KKLDNVR 98>XP_005268257 Length = 862 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRLDNVR 8 ++LDNVR Sbjct: 107 KKLDNVR 113>XP_005268256 Length = 1055 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRLDNVR 8 ++LDNVR Sbjct: 321 KKLDNVR 327>NP_060391 Length = 608 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 YRRLDNV 7 YR +DN+ Sbjct: 220 YRHVDNI 226>NP_001153517 Length = 978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRLDNVR 8 RRL+N+R Sbjct: 368 RRLENLR 374>NP_005260 Length = 1106 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRLDNVR 8 RRL+N+R Sbjct: 496 RRLENLR 502>NP_001161081 Length = 1065 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRLDNVR 8 RRL+N+R Sbjct: 455 RRLENLR 461>NP_006495 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YRRLDNVR 8 +R+L NVR Sbjct: 430 FRKLTNVR 437>NP_002204 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LDNVRS 9 LDN+RS Sbjct: 154 LDNIRS 159>NP_001131022 Length = 640 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 +LDN+RS Sbjct: 519 KLDNLRS 525>NP_001157945 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YRRLDN 6 Y RLDN Sbjct: 154 YERLDN 159>NP_060207 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YRRLDN 6 Y RLDN Sbjct: 154 YERLDN 159>NP_001020119 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YRRLDN 6 Y RLDN Sbjct: 154 YERLDN 159>XP_005268856 Length = 978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRLDNVR 8 RRL+N+R Sbjct: 368 RRLENLR 374>XP_006717995 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YRRLDNVR 8 +R+L NVR Sbjct: 429 FRKLTNVR 436>XP_005252749 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YRRLDNVR 8 +R+L NVR Sbjct: 430 FRKLTNVR 437>XP_005252748 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YRRLDNVR 8 +R+L NVR Sbjct: 430 FRKLTNVR 437>XP_006713693 Length = 754 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LDNVRS 9 LDN+RS Sbjct: 154 LDNIRS 159>XP_005247493 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LDNVRS 9 LDN+RS Sbjct: 154 LDNIRS 159>XP_006712913 Length = 648 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 +LDN+RS Sbjct: 527 KLDNLRS 533>XP_005246199 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 +LDN+RS Sbjct: 283 KLDNLRS 289>XP_005246198 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 +LDN+RS Sbjct: 307 KLDNLRS 313>XP_005246197 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 +LDN+RS Sbjct: 454 KLDNLRS 460>XP_005246196 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 +LDN+RS Sbjct: 478 KLDNLRS 484>XP_005246195 Length = 625 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 +LDN+RS Sbjct: 540 KLDNLRS 546>XP_005246194 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 +LDN+RS Sbjct: 540 KLDNLRS 546>XP_006710770 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YRRLDN 6 Y RLDN Sbjct: 136 YERLDN 141>NP_569119 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YRRLDNVR 8 +R+L NVR Sbjct: 372 FRKLTNVR 379>NP_001131023 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDNVRS 9 +LDN+RS Sbjct: 273 KLDNLRS 279Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.141 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 456,002 Number of extensions: 623 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |