Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 23 46 NP_858045 23 46 NP_006525 23 46 NP_001167559 23 46 NP_671766 18 1935 NP_671756 18 1935 NP_003734 18 1935 XP_006712189 18 1935 XP_005264685 18 1935 XP_005264684 18 1935 XP_005264683 18 1935 XP_005264682 18 1935 NP_001059 17 3301 XP_005265484 17 3301 NP_776249 17 4312 XP_005267408 17 4312 NP_004095 16 5631 NP_001058 16 5631 NP_001154948 16 5631 NP_078791 16 5631 NP_690873 16 5631 NP_001166244 16 5631 NP_694999 16 5631 XP_005258592 16 5631 XP_005257689 16 5631 XP_005268115 16 5631 XP_005268114 16 5631 XP_005268113 16 5631 NP_008952 16 7355 NP_062815 16 7355 NP_061869 16 7355 NP_001136112 16 7355 NP_987099 16 7355 NP_031373 16 7355 NP_597999 16 7355 NP_569708 16 7355 NP_001239056 16 7355 XP_006722063 16 7355 XP_006722062 16 7355 XP_006722061 16 7355 XP_006722060 16 7355 XP_005257605 16 7355 XP_005257604 16 7355 XP_006722059 16 7355 XP_006720510 16 7355 XP_005254321 16 7355 NP_005556 15 9605 NP_955387 15 9605 XP_006721220 15 9605 XP_006721219 15 9605 XP_005254442 15 9605>NP_001167558 Length = 1423 Score = 23.1 bits (48), Expect = 46 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YQSSEVKGW 9 YQSSE+KGW Sbjct: 1356 YQSSEMKGW 1364>NP_858045 Length = 1424 Score = 23.1 bits (48), Expect = 46 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YQSSEVKGW 9 YQSSE+KGW Sbjct: 1357 YQSSEMKGW 1365>NP_006525 Length = 1420 Score = 23.1 bits (48), Expect = 46 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YQSSEVKGW 9 YQSSE+KGW Sbjct: 1353 YQSSEMKGW 1361>NP_001167559 Length = 1415 Score = 23.1 bits (48), Expect = 46 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YQSSEVKGW 9 YQSSE+KGW Sbjct: 1348 YQSSEMKGW 1356>NP_671766 Length = 1440 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YQSSEVKGW 9 YQS ++K W Sbjct: 1277 YQSPDMKAW 1285>NP_671756 Length = 1399 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YQSSEVKGW 9 YQS ++K W Sbjct: 1277 YQSPDMKAW 1285>NP_003734 Length = 1441 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YQSSEVKGW 9 YQS ++K W Sbjct: 1277 YQSPDMKAW 1285>XP_006712189 Length = 1394 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YQSSEVKGW 9 YQS ++K W Sbjct: 1230 YQSPDMKAW 1238>XP_005264685 Length = 1399 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YQSSEVKGW 9 YQS ++K W Sbjct: 1277 YQSPDMKAW 1285>XP_005264684 Length = 1399 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YQSSEVKGW 9 YQS ++K W Sbjct: 1277 YQSPDMKAW 1285>XP_005264683 Length = 1440 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YQSSEVKGW 9 YQS ++K W Sbjct: 1277 YQSPDMKAW 1285>XP_005264682 Length = 1441 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YQSSEVKGW 9 YQS ++K W Sbjct: 1277 YQSPDMKAW 1285>NP_001059 Length = 1621 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YQSSEVKGW 9 Y+S VK W Sbjct: 1098 YESDPVKAW 1106>XP_005265484 Length = 1626 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YQSSEVKGW 9 Y+S VK W Sbjct: 1103 YESDPVKAW 1111>NP_776249 Length = 414 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SEVKGW 9 SEV+GW Sbjct: 34 SEVQGW 39>XP_005267408 Length = 414 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SEVKGW 9 SEV+GW Sbjct: 34 SEVQGW 39>NP_004095 Length = 2511 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 YQSSEVKGW 9 YQ+ +V+ W Sbjct: 1924 YQAKQVRRW 1932>NP_001058 Length = 1531 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 YQSSEVKGW 9 Y S VK W Sbjct: 1082 YDSDPVKAW 1090>NP_001154948 Length = 544 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SSEVKGW 9 SSE+K W Sbjct: 355 SSEMKAW 361>NP_078791 Length = 544 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SSEVKGW 9 SSE+K W Sbjct: 355 SSEMKAW 361>NP_690873 Length = 533 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YQSSEVKGW 9 Y SS VK W Sbjct: 376 YNSSLVKHW 384>NP_001166244 Length = 545 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YQSSEVKGW 9 Y SS VK W Sbjct: 388 YNSSLVKHW 396>NP_694999 Length = 686 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 YQSSEVKGW 9 YQ E GW Sbjct: 352 YQDKEGPGW 360>XP_005258592 Length = 536 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YQSSEVKGW 9 Y SS VK W Sbjct: 379 YNSSLVKHW 387>XP_005257689 Length = 1519 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 YQSSEVKGW 9 Y S VK W Sbjct: 1070 YDSDPVKAW 1078>XP_005268115 Length = 286 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SSEVKGW 9 SSE+K W Sbjct: 97 SSEMKAW 103>XP_005268114 Length = 289 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SSEVKGW 9 SSE+K W Sbjct: 100 SSEMKAW 106>XP_005268113 Length = 544 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SSEVKGW 9 SSE+K W Sbjct: 355 SSEMKAW 361>NP_008952 Length = 212 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QSSEVKGW 9 QSS+++ W Sbjct: 171 QSSDLRSW 178>NP_062815 Length = 729 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QSSEVKGW 9 QSS +GW Sbjct: 694 QSSSHRGW 701>NP_061869 Length = 1690 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 SSEVKGW 9 SSE GW Sbjct: 704 SSEATGW 710>NP_001136112 Length = 1726 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 SSEVKGW 9 SSE GW Sbjct: 704 SSEATGW 710>NP_987099 Length = 182 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YQSSEVKGW 9 ++SSE GW Sbjct: 154 FRSSEEWGW 162>NP_031373 Length = 1137 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 SSEVKGW 9 SSE K W Sbjct: 547 SSETKAW 553>NP_597999 Length = 264 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 YQSSEV 6 YQSSEV Sbjct: 7 YQSSEV 12>NP_569708 Length = 213 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YQSSEVKGW 9 ++SSE GW Sbjct: 185 FRSSEEWGW 193>NP_001239056 Length = 1062 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 SSEVKGW 9 SSE K W Sbjct: 472 SSETKAW 478>XP_006722063 Length = 1923 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 SSEVKGW 9 SSE GW Sbjct: 940 SSEATGW 946>XP_006722062 Length = 1866 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 SSEVKGW 9 SSE GW Sbjct: 940 SSEATGW 946>XP_006722061 Length = 1913 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 SSEVKGW 9 SSE GW Sbjct: 940 SSEATGW 946>XP_006722060 Length = 1915 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 SSEVKGW 9 SSE GW Sbjct: 940 SSEATGW 946>XP_005257605 Length = 1926 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 SSEVKGW 9 SSE GW Sbjct: 940 SSEATGW 946>XP_005257604 Length = 1962 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 SSEVKGW 9 SSE GW Sbjct: 940 SSEATGW 946>XP_006722059 Length = 1965 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 SSEVKGW 9 SSE GW Sbjct: 940 SSEATGW 946>XP_006720510 Length = 1062 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 SSEVKGW 9 SSE K W Sbjct: 472 SSETKAW 478>XP_005254321 Length = 1062 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 SSEVKGW 9 SSE K W Sbjct: 472 SSETKAW 478>NP_005556 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 SEVKGW 9 SEV GW Sbjct: 10 SEVLGW 15>NP_955387 Length = 1221 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 5/9 (55%) Query: 1 YQSSEVKGW 9 Y S +GW Sbjct: 658 YNSKPFRGW 666>XP_006721220 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 5/9 (55%) Query: 1 YQSSEVKGW 9 Y S +GW Sbjct: 246 YNSKPFRGW 254>XP_006721219 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 5/9 (55%) Query: 1 YQSSEVKGW 9 Y S +GW Sbjct: 486 YNSKPFRGW 494>XP_005254442 Length = 3041 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSEVKG 8 SSEVKG Sbjct: 109 SSEVKG 114Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.121 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 442,150 Number of extensions: 632 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |