Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 19 665 XP_006717989 19 665 NP_036434 17 4312 XP_005270731 17 4312 XP_005270730 17 4312 XP_006710560 17 4312 XP_006710559 17 4312 XP_006710558 17 4312 XP_006710557 17 4312 XP_006710556 17 4312 XP_006710555 17 4312 XP_005270727 17 4312 XP_006710554 17 4312 XP_005270725 17 4312 XP_005270724 17 4312 XP_006710553 17 4312 XP_005270723 17 4312 XP_006710552 17 4312 XP_006710551 17 4312 XP_006710550 17 4312 XP_006710549 17 4312 XP_006710548 17 4312 NP_001004693 17 4312 NP_002261 16 5631 NP_694858 16 5631 XP_005248557 16 5631 XP_005248558 16 5631 NP_776169 16 7355 NP_525022 15 9605 NP_115946 15 9605 NP_001277255 15 9605 NP_001277254 15 9605 NP_065849 15 9605 XP_005256994 15 9605 XP_005256993 15 9605 XP_005256992 15 9605 XP_006721697 15 9605 XP_006721696 15 9605 XP_005256991 15 9605 XP_005250953 15 9605 XP_005250952 15 9605 XP_005250951 15 9605 XP_005273127 15 9605 NP_861452 15 9605>NP_000305 Length = 403 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 YLVLTLTK 8 YLVLTLTK Sbjct: 315 YLVLTLTK 322>XP_006717989 Length = 388 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 YLVLTLTK 8 YLVLTLTK Sbjct: 300 YLVLTLTK 307>NP_036434 Length = 1403 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 995 FLVITLCKM 1003>XP_005270731 Length = 1177 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 995 FLVITLCKM 1003>XP_005270730 Length = 1177 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 995 FLVITLCKM 1003>XP_006710560 Length = 1181 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 1013 FLVITLCKM 1021>XP_006710559 Length = 1188 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 1013 FLVITLCKM 1021>XP_006710558 Length = 1191 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 1013 FLVITLCKM 1021>XP_006710557 Length = 1191 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 1013 FLVITLCKM 1021>XP_006710556 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 1013 FLVITLCKM 1021>XP_006710555 Length = 1403 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 995 FLVITLCKM 1003>XP_005270727 Length = 1403 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 995 FLVITLCKM 1003>XP_006710554 Length = 1421 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 1013 FLVITLCKM 1021>XP_005270725 Length = 1446 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 995 FLVITLCKM 1003>XP_005270724 Length = 1446 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 995 FLVITLCKM 1003>XP_006710553 Length = 1451 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 1000 FLVITLCKM 1008>XP_005270723 Length = 1459 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 1008 FLVITLCKM 1016>XP_006710552 Length = 1464 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 1013 FLVITLCKM 1021>XP_006710551 Length = 1464 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 1013 FLVITLCKM 1021>XP_006710550 Length = 1464 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 1013 FLVITLCKM 1021>XP_006710549 Length = 1464 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 1013 FLVITLCKM 1021>XP_006710548 Length = 1464 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 +LV+TL KM Sbjct: 1013 FLVITLCKM 1021>NP_001004693 Length = 312 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLVLTLTKM 9 Y++LT+ KM Sbjct: 220 YIILTIHKM 228>NP_002261 Length = 898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YLVLTLTKM 9 YL+ LTK+ Sbjct: 57 YLIFVLTKL 65>NP_694858 Length = 890 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YLVLTLTKM 9 YL+ LTK+ Sbjct: 49 YLIFVLTKL 57>XP_005248557 Length = 890 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YLVLTLTKM 9 YL+ LTK+ Sbjct: 49 YLIFVLTKL 57>XP_005248558 Length = 866 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YLVLTLTKM 9 YL+ LTK+ Sbjct: 57 YLIFVLTKL 65>NP_776169 Length = 354 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YLVLTLT 7 YLVLTL+ Sbjct: 334 YLVLTLS 340>NP_525022 Length = 1624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 YLVLTL 6 YLVLTL Sbjct: 413 YLVLTL 418>NP_115946 Length = 1042 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLVLTLTK 8 YL+LTL + Sbjct: 760 YLILTLLR 767>NP_001277255 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLVLTLTK 8 YL+LTL + Sbjct: 305 YLILTLLR 312>NP_001277254 Length = 1004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLVLTLTK 8 YL+LTL + Sbjct: 760 YLILTLLR 767>NP_065849 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLVLTLTK 8 YL+LTL + Sbjct: 803 YLILTLLR 810>XP_005256994 Length = 1443 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 YLVLTL 6 YLVLTL Sbjct: 421 YLVLTL 426>XP_005256993 Length = 1543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 YLVLTL 6 YLVLTL Sbjct: 332 YLVLTL 337>XP_005256992 Length = 1543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 YLVLTL 6 YLVLTL Sbjct: 332 YLVLTL 337>XP_006721697 Length = 1625 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 YLVLTL 6 YLVLTL Sbjct: 421 YLVLTL 426>XP_006721696 Length = 1632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 YLVLTL 6 YLVLTL Sbjct: 421 YLVLTL 426>XP_005256991 Length = 1632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 YLVLTL 6 YLVLTL Sbjct: 421 YLVLTL 426>XP_005250953 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YLVLTLT 7 YLV TLT Sbjct: 102 YLVCTLT 108>XP_005250952 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YLVLTLT 7 YLV TLT Sbjct: 248 YLVCTLT 254>XP_005250951 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YLVLTLT 7 YLV TLT Sbjct: 290 YLVCTLT 296>XP_005273127 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLTLTKM 9 VLTLTK+ Sbjct: 18 VLTLTKV 24>NP_861452 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YLVLTLT 7 YLV TLT Sbjct: 353 YLVCTLT 359Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.142 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 311,648 Number of extensions: 328 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |