Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001136098 18 1135 NP_000360 18 1135 NP_001018046 18 1135 XP_005268096 18 1135 XP_006720308 18 1135 XP_005268094 18 1135 NP_055850 18 1935 XP_005260398 18 1935 XP_006723812 18 1935 XP_006723811 18 1935 XP_006723810 18 1935 XP_005260400 18 1935 NP_001367 17 2528 NP_003242 17 2528 XP_006714289 17 3301 XP_006714287 17 3301 XP_006714286 17 3301 XP_005263076 17 3301 NP_001107829 17 3301 NP_001153698 17 4312 NP_001153730 17 4312 NP_149421 17 4312 NP_001153731 17 4312 NP_057167 17 4312 XP_006715393 17 4312 XP_005248707 17 4312 NP_055423 16 5631 NP_001274739 16 5631 NP_001028200 16 5631 NP_955453 16 5631 XP_006722363 16 5631 XP_005272600 16 5631 NP_543143 16 5631 NP_001020471 16 5631 NP_000072 16 7355 NP_000262 16 7355 NP_001138624 16 7355 NP_689628 16 7355 NP_001186306 16 7355 NP_055977 16 7355 XP_006722542 16 7355 XP_005258336 16 7355 XP_005258335 16 7355 XP_005258334 16 7355 XP_005273458 16 7355 XP_005273457 16 7355 XP_006711794 16 7355 XP_005273086 16 7355 XP_005273085 16 7355 XP_005273084 16 7355 NP_057700 15 9605 NP_037514 15 9605 NP_001275582 15 9605 NP_066564 15 9605 NP_004850 15 9605 NP_004288 15 9605 NP_003875 15 9605 NP_003694 15 9605 XP_006721881 15 9605 XP_006721880 15 9605 XP_006713992 15 9605 XP_005265585 15 9605>NP_001136098 Length = 274 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLTVIDKYA 9 YLTVIDK A Sbjct: 212 YLTVIDKDA 220>NP_000360 Length = 764 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLTVIDKYA 9 YLTVIDK A Sbjct: 212 YLTVIDKDA 220>NP_001018046 Length = 253 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLTVIDKYA 9 YLTVIDK A Sbjct: 212 YLTVIDKDA 220>XP_005268096 Length = 253 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLTVIDKYA 9 YLTVIDK A Sbjct: 212 YLTVIDKDA 220>XP_006720308 Length = 274 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLTVIDKYA 9 YLTVIDK A Sbjct: 212 YLTVIDKDA 220>XP_005268094 Length = 764 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLTVIDKYA 9 YLTVIDK A Sbjct: 212 YLTVIDKDA 220>NP_055850 Length = 956 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 YLTV+ KY Sbjct: 336 YLTVVTKY 343>XP_005260398 Length = 969 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 YLTV+ KY Sbjct: 336 YLTVVTKY 343>XP_006723812 Length = 969 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 YLTV+ KY Sbjct: 336 YLTVVTKY 343>XP_006723811 Length = 969 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 YLTV+ KY Sbjct: 336 YLTVVTKY 343>XP_006723810 Length = 969 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 YLTV+ KY Sbjct: 336 YLTVVTKY 343>XP_005260400 Length = 969 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 YLTV+ KY Sbjct: 336 YLTVVTKY 343>NP_001367 Length = 4646 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 Y+T IDKY Sbjct: 1738 YITWIDKY 1745>NP_003242 Length = 146 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LTVIDKYA 9 LTV+D+YA Sbjct: 14 LTVMDRYA 21>XP_006714289 Length = 169 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 Y+TV DKY Sbjct: 21 YITVGDKY 28>XP_006714287 Length = 309 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 Y+TV DKY Sbjct: 21 YITVGDKY 28>XP_006714286 Length = 309 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 Y+TV DKY Sbjct: 21 YITVGDKY 28>XP_005263076 Length = 309 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 Y+TV DKY Sbjct: 21 YITVGDKY 28>NP_001107829 Length = 309 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 Y+TV DKY Sbjct: 21 YITVGDKY 28>NP_001153698 Length = 472 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 +LT ID+Y Sbjct: 208 FLTAIDRY 215>NP_001153730 Length = 472 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 +LT ID+Y Sbjct: 208 FLTAIDRY 215>NP_149421 Length = 439 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 +LT ID+Y Sbjct: 175 FLTAIDRY 182>NP_001153731 Length = 472 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 +LT ID+Y Sbjct: 208 FLTAIDRY 215>NP_057167 Length = 472 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 +LT ID+Y Sbjct: 208 FLTAIDRY 215>XP_006715393 Length = 472 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 +LT ID+Y Sbjct: 208 FLTAIDRY 215>XP_005248707 Length = 472 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 +LT ID+Y Sbjct: 208 FLTAIDRY 215>NP_055423 Length = 1253 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LTVIDKY 8 +T++DKY Sbjct: 1219 ITILDKY 1225>NP_001274739 Length = 1253 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LTVIDKY 8 +T++DKY Sbjct: 1219 ITILDKY 1225>NP_001028200 Length = 822 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LTVIDKY 8 +T++DKY Sbjct: 788 ITILDKY 794>NP_955453 Length = 440 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLTVIDKYA 9 Y V+DKYA Sbjct: 287 YWGVMDKYA 295>XP_006722363 Length = 212 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLTVIDKYA 9 ++ +IDKYA Sbjct: 104 WMKMIDKYA 112>XP_005272600 Length = 1253 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LTVIDKY 8 +T++DKY Sbjct: 1219 ITILDKY 1225>NP_543143 Length = 440 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLTVIDKYA 9 Y V+DKYA Sbjct: 287 YWGVMDKYA 295>NP_001020471 Length = 244 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLTVIDKYA 9 ++ +IDKYA Sbjct: 136 WMKMIDKYA 144>NP_000072 Length = 3801 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 YLT+ +KY Sbjct: 2966 YLTIPNKY 2973>NP_000262 Length = 1278 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YLTVID 6 YLT+ID Sbjct: 1091 YLTIID 1096>NP_001138624 Length = 372 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVIDKY 8 TV+DKY Sbjct: 271 TVLDKY 276>NP_689628 Length = 397 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVIDKY 8 TV+DKY Sbjct: 296 TVLDKY 301>NP_001186306 Length = 720 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LTVIDKY 8 LTV++KY Sbjct: 701 LTVLEKY 707>NP_055977 Length = 724 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LTVIDKY 8 LTV++KY Sbjct: 705 LTVLEKY 711>XP_006722542 Length = 1273 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YLTVID 6 YLT+ID Sbjct: 1108 YLTIID 1113>XP_005258336 Length = 1286 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YLTVID 6 YLT+ID Sbjct: 1091 YLTIID 1096>XP_005258335 Length = 1295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YLTVID 6 YLT+ID Sbjct: 1108 YLTIID 1113>XP_005258334 Length = 1303 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YLTVID 6 YLT+ID Sbjct: 1108 YLTIID 1113>XP_005273458 Length = 307 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVIDKY 8 TV+DKY Sbjct: 206 TVLDKY 211>XP_005273457 Length = 307 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVIDKY 8 TV+DKY Sbjct: 206 TVLDKY 211>XP_006711794 Length = 3022 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 YLT+ +KY Sbjct: 2187 YLTIPNKY 2194>XP_005273086 Length = 3264 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 YLT+ +KY Sbjct: 2966 YLTIPNKY 2973>XP_005273085 Length = 3755 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 YLT+ +KY Sbjct: 2920 YLTIPNKY 2927>XP_005273084 Length = 3801 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLTVIDKY 8 YLT+ +KY Sbjct: 2966 YLTIPNKY 2973>NP_057700 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LTVIDKY 8 LTVID Y Sbjct: 29 LTVIDVY 35>NP_037514 Length = 750 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YLTVID 6 YLTV+D Sbjct: 160 YLTVLD 165>NP_001275582 Length = 1679 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YLTVIDK 7 YLT +DK Sbjct: 1610 YLTKVDK 1616>NP_066564 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YLTVIDKYA 9 +LT D+YA Sbjct: 610 FLTYADEYA 618>NP_004850 Length = 1675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YLTVIDK 7 YLT +DK Sbjct: 1606 YLTKVDK 1612>NP_004288 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLTVIDKYA 9 YLT ID+ A Sbjct: 156 YLTDIDRIA 164>NP_003875 Length = 832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YLTVIDKYA 9 +LT D+YA Sbjct: 605 FLTYADEYA 613>NP_003694 Length = 857 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTVIDK 7 LTVIDK Sbjct: 492 LTVIDK 497>XP_006721881 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YLTVIDKYA 9 +LT D+YA Sbjct: 249 FLTYADEYA 257>XP_006721880 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YLTVIDKYA 9 +LT D+YA Sbjct: 610 FLTYADEYA 618>XP_006713992 Length = 857 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTVIDK 7 LTVIDK Sbjct: 492 LTVIDK 497>XP_005265585 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YLTVIDKYA 9 +LT D+YA Sbjct: 605 FLTYADEYA 613Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.143 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 476,283 Number of extensions: 879 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |