Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 19 665 XP_006714104 19 665 XP_005265800 19 665 XP_006714103 19 665 XP_006714102 19 665 NP_001077073 17 2528 NP_001077075 17 2528 NP_001077076 17 2528 NP_001077072 17 2528 NP_001077071 17 2528 NP_000255 17 2528 NP_001077074 17 2528 NP_001093581 17 2528 XP_005252159 17 2528 NP_001170904 17 3301 NP_001170899 17 3301 NP_001170902 17 3301 NP_671737 17 3301 NP_067638 17 3301 NP_003298 17 3301 NP_001158058 17 3301 NP_071941 17 3301 XP_006724113 17 3301 XP_006724112 17 3301 XP_005261228 17 3301 XP_005253976 17 3301 XP_005253975 17 3301 XP_006711681 17 3301 XP_006711680 17 3301 XP_005245637 17 3301 NP_001243474 17 4312 NP_115822 17 4312 XP_006714785 17 4312 NP_005834 16 5631 NP_000115 16 5631 XP_005246265 16 5631 NP_002596 16 7355 NP_005379 16 7355 NP_002588 16 7355 NP_001230066 16 7355 NP_940959 16 7355 XP_006720631 16 7355 XP_006720630 16 7355 XP_005254990 16 7355 NP_072098 16 7355 NP_057186 15 9605 NP_001096138 15 9605 NP_001096137 15 9605 NP_001269588 15 9605 NP_001020111 15 9605 NP_060414 15 9605 NP_114141 15 9605 XP_005253054 15 9605 XP_006716203 15 9605 XP_006711842 15 9605 NP_002780 15 9605 NP_872625 15 9605>NP_006197 Length = 1089 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKSGEMIVV 9 YKSGE IVV Sbjct: 225 YKSGETIVV 233>XP_006714104 Length = 832 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKSGEMIVV 9 YKSGE IVV Sbjct: 250 YKSGETIVV 258>XP_005265800 Length = 1089 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKSGEMIVV 9 YKSGE IVV Sbjct: 225 YKSGETIVV 233>XP_006714103 Length = 1111 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKSGEMIVV 9 YKSGE IVV Sbjct: 247 YKSGETIVV 255>XP_006714102 Length = 1114 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKSGEMIVV 9 YKSGE IVV Sbjct: 250 YKSGETIVV 258>NP_001077073 Length = 1296 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YKSGEMI 7 YKSGE+I Sbjct: 53 YKSGELI 59>NP_001077075 Length = 1296 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YKSGEMI 7 YKSGE+I Sbjct: 53 YKSGELI 59>NP_001077076 Length = 1296 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YKSGEMI 7 YKSGE+I Sbjct: 53 YKSGELI 59>NP_001077072 Length = 1446 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YKSGEMI 7 YKSGE+I Sbjct: 203 YKSGELI 209>NP_001077071 Length = 1381 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YKSGEMI 7 YKSGE+I Sbjct: 138 YKSGELI 144>NP_000255 Length = 1447 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YKSGEMI 7 YKSGE+I Sbjct: 204 YKSGELI 210>NP_001077074 Length = 1296 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YKSGEMI 7 YKSGE+I Sbjct: 53 YKSGELI 59>NP_001093581 Length = 112 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YKSGEMI 7 YK+GEMI Sbjct: 57 YKTGEMI 63>XP_005252159 Length = 1296 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YKSGEMI 7 YKSGE+I Sbjct: 53 YKSGELI 59>NP_001170904 Length = 764 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKSGEMIVV 9 ++SGEM+ V Sbjct: 649 FRSGEMVTV 657>NP_001170899 Length = 824 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKSGEMIVV 9 ++SGEM+ V Sbjct: 709 FRSGEMVTV 717>NP_001170902 Length = 837 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKSGEMIVV 9 ++SGEM+ V Sbjct: 722 FRSGEMVTV 730>NP_671737 Length = 811 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKSGEMIVV 9 ++SGEM+ V Sbjct: 696 FRSGEMVTV 704>NP_067638 Length = 871 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKSGEMIVV 9 ++SGEM+ V Sbjct: 756 FRSGEMVTV 764>NP_003298 Length = 1503 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YKSGEMIVV 9 YK GE+I + Sbjct: 231 YKEGELITI 239>NP_001158058 Length = 3708 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YKSGEMI 7 YK GEMI Sbjct: 248 YKDGEMI 254>NP_071941 Length = 396 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YKSGEMIV 8 YKSGE I+ Sbjct: 261 YKSGEQIL 268>XP_006724113 Length = 1206 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YKSGEMIVV 9 YK GE+I + Sbjct: 231 YKEGELITI 239>XP_006724112 Length = 1469 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YKSGEMIVV 9 YK GE+I + Sbjct: 231 YKEGELITI 239>XP_005261228 Length = 1503 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YKSGEMIVV 9 YK GE+I + Sbjct: 231 YKEGELITI 239>XP_005253976 Length = 837 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKSGEMIVV 9 ++SGEM+ V Sbjct: 722 FRSGEMVTV 730>XP_005253975 Length = 871 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKSGEMIVV 9 ++SGEM+ V Sbjct: 756 FRSGEMVTV 764>XP_006711681 Length = 3448 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YKSGEMI 7 YK GEMI Sbjct: 248 YKDGEMI 254>XP_006711680 Length = 3617 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YKSGEMI 7 YK GEMI Sbjct: 248 YKDGEMI 254>XP_005245637 Length = 3683 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YKSGEMI 7 YK GEMI Sbjct: 248 YKDGEMI 254>NP_001243474 Length = 1140 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YKSGEMIV 8 Y+SGEM V Sbjct: 99 YESGEMCV 106>NP_115822 Length = 1140 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YKSGEMIV 8 Y+SGEM V Sbjct: 99 YESGEMCV 106>XP_006714785 Length = 1109 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YKSGEMIV 8 Y+SGEM V Sbjct: 99 YESGEMCV 106>NP_005834 Length = 525 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKSGEMIVV 9 +K GE+I+V Sbjct: 223 FKHGEIIIV 231>NP_000115 Length = 1493 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KSGEMIVV 9 +SG+MIVV Sbjct: 837 RSGKMIVV 844>XP_005246265 Length = 484 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YKSGEMIV 8 Y GEM+V Sbjct: 6 YNKGEMVV 13>NP_002596 Length = 829 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YKSGEMI 7 Y+SGE+I Sbjct: 250 YQSGELI 256>NP_005379 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKSGEMI 7 YK GE+I Sbjct: 239 YKGGELI 245>NP_002588 Length = 246 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKSGEMI 7 YK GE+I Sbjct: 192 YKGGELI 198>NP_001230066 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YKSGEMI 7 Y+SGE+I Sbjct: 178 YQSGELI 184>NP_940959 Length = 357 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KSGEMIVV 9 +SGEM+V+ Sbjct: 215 RSGEMLVL 222>XP_006720631 Length = 582 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YKSGEMI 7 Y+SGE+I Sbjct: 250 YQSGELI 256>XP_006720630 Length = 582 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YKSGEMI 7 Y+SGE+I Sbjct: 3 YQSGELI 9>XP_005254990 Length = 639 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YKSGEMI 7 Y+SGE+I Sbjct: 60 YQSGELI 66>NP_072098 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKSGEMI 7 YK GE+I Sbjct: 140 YKGGELI 146>NP_057186 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 KSGEMIV 8 KSG+M++ Sbjct: 462 KSGQMVI 468>NP_001096138 Length = 190 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YKSGEM 6 YK GEM Sbjct: 108 YKEGEM 113>NP_001096137 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YKSGEM 6 YK GEM Sbjct: 179 YKEGEM 184>NP_001269588 Length = 1355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YKSGEMIV 8 YK GE++V Sbjct: 689 YKPGEVMV 696>NP_001020111 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 KSGEMIV 8 KSG+M++ Sbjct: 462 KSGQMVI 468>NP_060414 Length = 1287 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YKSGEMIV 8 YK GE++V Sbjct: 621 YKPGEVMV 628>NP_114141 Length = 5635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKSGEMI 7 YK+G MI Sbjct: 3094 YKNGRMI 3100>XP_005253054 Length = 1375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YKSGEMIV 8 YK GE++V Sbjct: 709 YKPGEVMV 716>XP_006716203 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSGEMIVV 9 +SG MIV+ Sbjct: 194 RSGSMIVI 201>XP_006711842 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 KSGEMIV 8 KSG+M++ Sbjct: 462 KSGQMVI 468>NP_002780 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YKSGEM 6 YK GEM Sbjct: 179 YKEGEM 184>NP_872625 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSGEMIVV 9 +SG MIV+ Sbjct: 194 RSGSMIVI 201Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.137 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 523,014 Number of extensions: 559 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |