Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000542 20 299 NP_937799 20 299 NP_001094058 17 4312 NP_061323 17 4312 NP_003631 16 5631 NP_001032 16 5631 XP_005252342 16 5631 NP_958843 16 7355 NP_660312 16 7355 NP_001269963 16 7355 NP_001006635 16 7355 NP_060524 16 7355 XP_006721123 16 7355 XP_005255471 16 7355 XP_006721121 16 7355 XP_005255470 16 7355 XP_006721120 16 7355 XP_006719709 16 7355 XP_006719708 16 7355 XP_006719707 16 7355 XP_006719706 16 7355 XP_006716569 16 7355 XP_005250844 16 7355 XP_005250843 16 7355 XP_005250841 16 7355 XP_005250840 16 7355 NP_001104537 15 9605 NP_001096 15 9605 NP_690051 15 9605 NP_006038 15 9605 NP_001185769 15 9605 NP_001185767 15 9605 NP_002800 15 9605 NP_078813 15 9605 NP_055553 15 9605 NP_640332 15 9605 NP_001267730 15 9605 NP_060904 15 9605 NP_775922 15 9605 XP_006723507 15 9605 XP_005259397 15 9605 XP_005257925 15 9605 XP_005257924 15 9605 XP_005257923 15 9605 XP_005257922 15 9605 XP_005257921 15 9605 XP_006722263 15 9605 XP_005257920 15 9605 XP_006714953 15 9605 XP_006712888 15 9605 XP_005246996 15 9605 XP_005246997 15 9605>NP_000542 Length = 213 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YKRLDIVRS 9 Y+RLDIVRS Sbjct: 175 YRRLDIVRS 183>NP_937799 Length = 172 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YKRLDIVRS 9 Y+RLDIVRS Sbjct: 134 YRRLDIVRS 142>NP_001094058 Length = 1191 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YKRLDIVRS 9 Y+R DI+RS Sbjct: 706 YQRDDIIRS 714>NP_061323 Length = 1064 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YKRLDIVRS 9 Y+R DI+RS Sbjct: 706 YQRDDIIRS 714>NP_003631 Length = 1332 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YKRLDIVRS 9 Y RLDI+ + Sbjct: 1099 YNRLDIIET 1107>NP_001032 Length = 1827 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YKRLDIVR 8 YK LD+V+ Sbjct: 362 YKSLDVVK 369>XP_005252342 Length = 1218 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YKRLDIVRS 9 Y RLDI+ + Sbjct: 985 YNRLDIIET 993>NP_958843 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKRLDIVRS 9 +KR +I+RS Sbjct: 80 HKRTEIIRS 88>NP_660312 Length = 289 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLDIVRS 9 RLDIVR+ Sbjct: 233 RLDIVRA 239>NP_001269963 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLDIVRS 9 RLDIVR+ Sbjct: 195 RLDIVRA 201>NP_001006635 Length = 881 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KRLDIVRS 9 +RLD VRS Sbjct: 34 RRLDTVRS 41>NP_060524 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KRLDIVRS 9 +RLD VRS Sbjct: 34 RRLDTVRS 41>XP_006721123 Length = 775 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KRLDIVRS 9 +RLD VRS Sbjct: 34 RRLDTVRS 41>XP_005255471 Length = 840 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KRLDIVRS 9 +RLD VRS Sbjct: 34 RRLDTVRS 41>XP_006721121 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KRLDIVRS 9 +RLD VRS Sbjct: 34 RRLDTVRS 41>XP_005255470 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KRLDIVRS 9 +RLD VRS Sbjct: 34 RRLDTVRS 41>XP_006721120 Length = 880 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KRLDIVRS 9 +RLD VRS Sbjct: 33 RRLDTVRS 40>XP_006719709 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKRLDIVRS 9 +KR +I+RS Sbjct: 80 HKRTEIIRS 88>XP_006719708 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKRLDIVRS 9 +KR +I+RS Sbjct: 80 HKRTEIIRS 88>XP_006719707 Length = 682 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKRLDIVRS 9 +KR +I+RS Sbjct: 80 HKRTEIIRS 88>XP_006719706 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKRLDIVRS 9 +KR +I+RS Sbjct: 80 HKRTEIIRS 88>XP_006716569 Length = 289 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLDIVRS 9 RLDIVR+ Sbjct: 233 RLDIVRA 239>XP_005250844 Length = 219 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLDIVRS 9 RLDIVR+ Sbjct: 163 RLDIVRA 169>XP_005250843 Length = 227 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLDIVRS 9 RLDIVR+ Sbjct: 171 RLDIVRA 177>XP_005250841 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLDIVRS 9 RLDIVR+ Sbjct: 203 RLDIVRA 209>XP_005250840 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLDIVRS 9 RLDIVR+ Sbjct: 241 RLDIVRA 247>NP_001104537 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKRLDI 6 YKR+DI Sbjct: 399 YKRVDI 404>NP_001096 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKRLDI 6 YKR+DI Sbjct: 399 YKRVDI 404>NP_690051 Length = 932 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YKRLDIV 7 +K+LDIV Sbjct: 450 FKKLDIV 456>NP_006038 Length = 932 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YKRLDIV 7 +K+LDIV Sbjct: 450 FKKLDIV 456>NP_001185769 Length = 932 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YKRLDIV 7 +K+LDIV Sbjct: 450 FKKLDIV 456>NP_001185767 Length = 932 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YKRLDIV 7 +K+LDIV Sbjct: 450 FKKLDIV 456>NP_002800 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLDIVRS 9 +LD+VRS Sbjct: 223 KLDVVRS 229>NP_078813 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YKRLDIVR 8 Y R DI+R Sbjct: 94 YVRFDIIR 101>NP_055553 Length = 1356 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RLDIVR 8 RLDIVR Sbjct: 834 RLDIVR 839>NP_640332 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKRLDI 6 Y+RLDI Sbjct: 75 YRRLDI 80>NP_001267730 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YKRLDIVR 8 YK+ D+VR Sbjct: 271 YKQNDVVR 278>NP_060904 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YKRLDIVR 8 YK+ D+VR Sbjct: 271 YKQNDVVR 278>NP_775922 Length = 6996 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YKRLDIVR 8 YKR DI++ Sbjct: 198 YKRKDILK 205>XP_006723507 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKRLDI 6 Y+RLDI Sbjct: 90 YRRLDI 95>XP_005259397 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKRLDI 6 Y+RLDI Sbjct: 90 YRRLDI 95>XP_005257925 Length = 850 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RLDIVR 8 RLDIVR Sbjct: 298 RLDIVR 303>XP_005257924 Length = 1122 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RLDIVR 8 RLDIVR Sbjct: 570 RLDIVR 575>XP_005257923 Length = 1131 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RLDIVR 8 RLDIVR Sbjct: 579 RLDIVR 584>XP_005257922 Length = 1366 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RLDIVR 8 RLDIVR Sbjct: 844 RLDIVR 849>XP_005257921 Length = 1370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RLDIVR 8 RLDIVR Sbjct: 848 RLDIVR 853>XP_006722263 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RLDIVR 8 RLDIVR Sbjct: 838 RLDIVR 843>XP_005257920 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RLDIVR 8 RLDIVR Sbjct: 838 RLDIVR 843>XP_006714953 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YKRLDIVR 8 YK+ D+VR Sbjct: 271 YKQNDVVR 278>XP_006712888 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKRLDI 6 YKR+DI Sbjct: 399 YKRVDI 404>XP_005246996 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKRLDI 6 YKR+DI Sbjct: 399 YKRVDI 404>XP_005246997 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKRLDI 6 YKR+DI Sbjct: 399 YKRVDI 404Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.147 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 427,284 Number of extensions: 609 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |