Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001245200                                                           22     134
NP_000240                                                              22     134
NP_055196                                                              22     134
NP_001035197                                                           22     134
XP_005267591                                                           22     134
XP_005267590                                                           22     134
XP_005267589                                                           22     134
XP_005267588                                                           22     134
XP_006720179                                                           22     134
XP_005265218                                                           22     134
NP_000525                                                              20     390
NP_001121615                                                           20     390
NP_001121616                                                           20     390
NP_848621                                                              20     390
XP_005259919                                                           20     390
XP_005259918                                                           20     390
XP_005246706                                                           20     390
XP_005246704                                                           20     390
NP_000526                                                              19     869
XP_006715806                                                           19     869
XP_006715805                                                           19     869
XP_005276068                                                           17    3301
NP_001185624                                                           17    4312
NP_002395                                                              17    4312
NP_006464                                                              17    4312
XP_005273771                                                           17    4312
NP_001025035                                                           16    5631
NP_002282                                                              16    5631
NP_073603                                                              16    5631
NP_004324                                                              16    7355
NP_000083                                                              16    7355
NP_001013870                                                           16    7355
NP_061926                                                              16    7355
NP_963860                                                              16    7355
NP_001276932                                                           16    7355
NP_002499                                                              16    7355
NP_001837                                                              16    7355
XP_006717964                                                           16    7355
XP_006717963                                                           16    7355
XP_006717962                                                           16    7355
XP_006717961                                                           16    7355
XP_005269972                                                           16    7355
XP_005269971                                                           16    7355
XP_006717960                                                           16    7355
XP_006717959                                                           16    7355
XP_005269970                                                           16    7355
XP_005269969                                                           16    7355
XP_005269968                                                           16    7355
XP_005250103                                                           16    7355
XP_005250102                                                           16    7355
XP_005247794                                                           16    7355
XP_006713802                                                           16    7355
XP_006713801                                                           16    7355
XP_006712315                                                           16    7355
XP_006712314                                                           16    7355
XP_005246339                                                           16    7355
XP_006712313                                                           16    7355
XP_006712312                                                           16    7355
XP_006712311                                                           16    7355
XP_006712310                                                           16    7355
XP_006712309                                                           16    7355
XP_005246338                                                           16    7355
XP_006711834                                                           16    7355
NP_653176                                                              16    7355
NP_005484                                                              15    9605
NP_002784                                                              15    9605
NP_060367                                                              15    9605
NP_001004439                                                           15    9605
NP_002016                                                              15    9605
NP_001162595                                                           15    9605
NP_075053                                                              15    9605
NP_065901                                                              15    9605
NP_060198                                                              15    9605
XP_006722026                                                           15    9605
XP_005256129                                                           15    9605
XP_005256127                                                           15    9605
XP_005254285                                                           15    9605
XP_006719257                                                           15    9605
XP_006719256                                                           15    9605
XP_006717895                                                           15    9605
XP_005269865                                                           15    9605
XP_006717894                                                           15    9605
XP_005269864                                                           15    9605
XP_005269863                                                           15    9605
XP_006715008                                                           15    9605
XP_006714735                                                           15    9605
XP_005248626                                                           15    9605
XP_006713280                                                           15    9605
XP_006713279                                                           15    9605
NP_001177693                                                           15    9605
NP_005802                                                              15    9605
>NP_001245200
          Length = 687

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   YGFRGDALA 9
           YGFRG+ALA
Sbjct: 97  YGFRGEALA 105
>NP_000240
          Length = 756

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   YGFRGDALA 9
           YGFRG+ALA
Sbjct: 97  YGFRGEALA 105
>NP_055196
          Length = 1429

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  YGFRGDALA 9
          YGFRG+ALA
Sbjct: 90 YGFRGEALA 98
>NP_001035197
          Length = 1453

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  YGFRGDALA 9
          YGFRG+ALA
Sbjct: 90 YGFRGEALA 98
>XP_005267591
          Length = 1275

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  YGFRGDALA 9
          YGFRG+ALA
Sbjct: 90 YGFRGEALA 98
>XP_005267590
          Length = 1394

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  YGFRGDALA 9
          YGFRG+ALA
Sbjct: 90 YGFRGEALA 98
>XP_005267589
          Length = 1418

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  YGFRGDALA 9
          YGFRG+ALA
Sbjct: 90 YGFRGEALA 98
>XP_005267588
          Length = 1453

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  YGFRGDALA 9
          YGFRG+ALA
Sbjct: 90 YGFRGEALA 98
>XP_006720179
          Length = 1453

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  YGFRGDALA 9
          YGFRG+ALA
Sbjct: 90 YGFRGEALA 98
>XP_005265218
          Length = 687

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   YGFRGDALA 9
           YGFRG+ALA
Sbjct: 97  YGFRGEALA 105
>NP_000525
          Length = 932

 Score = 20.0 bits (40), Expect =   390
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 1  YGFRGDAL 8
          YGFRG+AL
Sbjct: 90 YGFRGEAL 97
>NP_001121615
          Length = 893

 Score = 20.0 bits (40), Expect =   390
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 1  YGFRGDAL 8
          YGFRG+AL
Sbjct: 90 YGFRGEAL 97
>NP_001121616
          Length = 770

 Score = 20.0 bits (40), Expect =   390
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 1  YGFRGDAL 8
          YGFRG+AL
Sbjct: 90 YGFRGEAL 97
>NP_848621
          Length = 318

 Score = 20.0 bits (40), Expect =   390
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 1   YGFRGDAL 8
           YGFRG+AL
Sbjct: 122 YGFRGEAL 129
>XP_005259919
          Length = 318

 Score = 20.0 bits (40), Expect =   390
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 1   YGFRGDAL 8
           YGFRG+AL
Sbjct: 122 YGFRGEAL 129
>XP_005259918
          Length = 318

 Score = 20.0 bits (40), Expect =   390
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 1   YGFRGDAL 8
           YGFRG+AL
Sbjct: 122 YGFRGEAL 129
>XP_005246706
          Length = 891

 Score = 20.0 bits (40), Expect =   390
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 1  YGFRGDAL 8
          YGFRG+AL
Sbjct: 90 YGFRGEAL 97
>XP_005246704
          Length = 932

 Score = 20.0 bits (40), Expect =   390
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 1  YGFRGDAL 8
          YGFRG+AL
Sbjct: 90 YGFRGEAL 97
>NP_000526
          Length = 862

 Score = 18.9 bits (37), Expect =   869
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1   YGFRGDALA 9
           +GFRG+AL+
Sbjct: 104 FGFRGEALS 112
>XP_006715806
          Length = 810

 Score = 18.9 bits (37), Expect =   869
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1   YGFRGDALA 9
           +GFRG+AL+
Sbjct: 104 FGFRGEALS 112
>XP_006715805
          Length = 860

 Score = 18.9 bits (37), Expect =   869
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1   YGFRGDALA 9
           +GFRG+AL+
Sbjct: 102 FGFRGEALS 110
>XP_005276068
          Length = 367

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  YGFRGDALA 9
          YG +GD+L+
Sbjct: 27 YGHKGDSLS 35
>NP_001185624
          Length = 279

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  GFRGDAL 8
          G RGDAL
Sbjct: 48 GIRGDAL 54
>NP_002395
          Length = 255

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  GFRGDAL 8
          G RGDAL
Sbjct: 24 GIRGDAL 30
>NP_006464
          Length = 622

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   YGFRGDALA 9
           Y F GD+LA
Sbjct: 445 YAFFGDSLA 453
>XP_005273771
          Length = 613

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   YGFRGDALA 9
           Y F GD+LA
Sbjct: 436 YAFFGDSLA 444
>NP_001025035
          Length = 1200

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  GFRGDALA 9
          GF+GD L+
Sbjct: 39 GFQGDGLS 46
>NP_002282
          Length = 1786

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    YGFRGDAL 8
            +G+ GDAL
Sbjct: 1014 FGYYGDAL 1021
>NP_073603
          Length = 537

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   YGFRGDAL 8
           YGF GD +
Sbjct: 290 YGFYGDII 297
>NP_004324
          Length = 766

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   GFRGD 6
           GFRGD
Sbjct: 387 GFRGD 391
>NP_000083
          Length = 1690

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   GFRGD 6
           GFRGD
Sbjct: 722 GFRGD 726
>NP_001013870
          Length = 799

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GFRGDAL 8
           GF+GD L
Sbjct: 703 GFQGDTL 709
>NP_061926
          Length = 804

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GFRGDAL 8
           GF+GD L
Sbjct: 708 GFQGDTL 714
>NP_963860
          Length = 426

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   YGFRGDALA 9
           YGF   ALA
Sbjct: 314 YGFTSGALA 322
>NP_001276932
          Length = 493

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GFRGDA 7
           GFRG+A
Sbjct: 122 GFRGEA 127
>NP_002499
          Length = 1247

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   GFRGD 6
           GFRGD
Sbjct: 700 GFRGD 704
>NP_001837
          Length = 1712

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2    GFRGD 6
            GFRGD
Sbjct: 1450 GFRGD 1454
>XP_006717964
          Length = 781

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GFRGDAL 8
           GF+GD L
Sbjct: 685 GFQGDTL 691
>XP_006717963
          Length = 749

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GFRGDAL 8
           GF+GD L
Sbjct: 734 GFQGDTL 740
>XP_006717962
          Length = 791

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GFRGDAL 8
           GF+GD L
Sbjct: 695 GFQGDTL 701
>XP_006717961
          Length = 799

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GFRGDAL 8
           GF+GD L
Sbjct: 703 GFQGDTL 709
>XP_005269972
          Length = 803

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GFRGDAL 8
           GF+GD L
Sbjct: 707 GFQGDTL 713
>XP_005269971
          Length = 807

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GFRGDAL 8
           GF+GD L
Sbjct: 711 GFQGDTL 717
>XP_006717960
          Length = 809

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GFRGDAL 8
           GF+GD L
Sbjct: 713 GFQGDTL 719
>XP_006717959
          Length = 809

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GFRGDAL 8
           GF+GD L
Sbjct: 713 GFQGDTL 719
>XP_005269970
          Length = 814

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GFRGDAL 8
           GF+GD L
Sbjct: 718 GFQGDTL 724
>XP_005269969
          Length = 820

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GFRGDAL 8
           GF+GD L
Sbjct: 724 GFQGDTL 730
>XP_005269968
          Length = 830

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GFRGDAL 8
           GF+GD L
Sbjct: 734 GFQGDTL 740
>XP_005250103
          Length = 758

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   GFRGD 6
           GFRGD
Sbjct: 387 GFRGD 391
>XP_005250102
          Length = 767

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   GFRGD 6
           GFRGD
Sbjct: 387 GFRGD 391
>XP_005247794
          Length = 518

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GFRGDA 7
           GFRG+A
Sbjct: 147 GFRGEA 152
>XP_006713802
          Length = 520

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GFRGDA 7
           GFRG+A
Sbjct: 149 GFRGEA 154
>XP_006713801
          Length = 520

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GFRGDA 7
           GFRG+A
Sbjct: 149 GFRGEA 154
>XP_006712315
          Length = 1420

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   GFRGD 6
           GFRGD
Sbjct: 722 GFRGD 726
>XP_006712314
          Length = 1445

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   GFRGD 6
           GFRGD
Sbjct: 722 GFRGD 726
>XP_005246339
          Length = 1505

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   GFRGD 6
           GFRGD
Sbjct: 537 GFRGD 541
>XP_006712313
          Length = 1608

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   GFRGD 6
           GFRGD
Sbjct: 722 GFRGD 726
>XP_006712312
          Length = 1611

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   GFRGD 6
           GFRGD
Sbjct: 722 GFRGD 726
>XP_006712311
          Length = 1612

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   GFRGD 6
           GFRGD
Sbjct: 722 GFRGD 726
>XP_006712310
          Length = 1612

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   GFRGD 6
           GFRGD
Sbjct: 722 GFRGD 726
>XP_006712309
          Length = 1627

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   GFRGD 6
           GFRGD
Sbjct: 722 GFRGD 726
>XP_005246338
          Length = 1690

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   GFRGD 6
           GFRGD
Sbjct: 722 GFRGD 726
>XP_006711834
          Length = 1156

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   GFRGD 6
           GFRGD
Sbjct: 700 GFRGD 704
>NP_653176
          Length = 669

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   YGFRGDAL 8
           YGF  DAL
Sbjct: 185 YGFLEDAL 192
>NP_005484
          Length = 729

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1   YGFRGD 6
           YG+ GD
Sbjct: 252 YGYHGD 257
>NP_002784
          Length = 241

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 2  GFRGDAL 8
          GF GD L
Sbjct: 84 GFHGDCL 90
>NP_060367
          Length = 459

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   YGFRGDA 7
           YG  GDA
Sbjct: 305 YGLSGDA 311
>NP_001004439
          Length = 1188

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   YGFRGDAL 8
           +GFRG  L
Sbjct: 578 HGFRGSIL 585
>NP_002016
          Length = 1311

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  YGFRGDALA 9
          Y  +GDALA
Sbjct: 60 YTNKGDALA 68
>NP_001162595
          Length = 1276

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  YGFRGDALA 9
          Y  +GDALA
Sbjct: 60 YTNKGDALA 68
>NP_075053
          Length = 765

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   YGFRGDA 7
           Y F GDA
Sbjct: 385 YNFMGDA 391
>NP_065901
          Length = 620

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1   YGFRGD 6
           YG+ GD
Sbjct: 140 YGYHGD 145
>NP_060198
          Length = 496

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   FRGDAL 8
           FRGD+L
Sbjct: 329 FRGDSL 334
>XP_006722026
          Length = 495

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   FRGDAL 8
           FRGD+L
Sbjct: 328 FRGDSL 333
>XP_005256129
          Length = 518

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1  YGFRGD 6
          YG+ GD
Sbjct: 8  YGYHGD 13
>XP_005256127
          Length = 650

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1   YGFRGD 6
           YG+ GD
Sbjct: 140 YGYHGD 145
>XP_005254285
          Length = 1086

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   YGFRGDAL 8
           +GFRG  L
Sbjct: 476 HGFRGSIL 483
>XP_006719257
          Length = 407

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   YGFRGDAL 8
           + F+GDAL
Sbjct: 117 HDFQGDAL 124
>XP_006719256
          Length = 407

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   YGFRGDAL 8
           + F+GDAL
Sbjct: 117 HDFQGDAL 124
>XP_006717895
          Length = 1297

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  GFRGDAL 8
          GFRG A+
Sbjct: 30 GFRGSAV 36
>XP_005269865
          Length = 1331

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  GFRGDAL 8
          GFRG A+
Sbjct: 30 GFRGSAV 36
>XP_006717894
          Length = 1342

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  GFRGDAL 8
          GFRG A+
Sbjct: 30 GFRGSAV 36
>XP_005269864
          Length = 1364

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  GFRGDAL 8
          GFRG A+
Sbjct: 30 GFRGSAV 36
>XP_005269863
          Length = 1369

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  GFRGDAL 8
          GFRG A+
Sbjct: 30 GFRGSAV 36
>XP_006715008
          Length = 500

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 1  YGFRGD 6
          YG+ GD
Sbjct: 23 YGYHGD 28
>XP_006714735
          Length = 722

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   YGFRGDA 7
           Y F GDA
Sbjct: 385 YNFMGDA 391
>XP_005248626
          Length = 724

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   YGFRGDA 7
           Y F GDA
Sbjct: 344 YNFMGDA 350
>XP_006713280
          Length = 184

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1  YGFRGDA 7
          YG  GDA
Sbjct: 30 YGLSGDA 36
>XP_006713279
          Length = 459

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   YGFRGDA 7
           YG  GDA
Sbjct: 305 YGLSGDA 311
>NP_001177693
          Length = 176

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   YGFRGDALA 9
           YG R  ALA
Sbjct: 105 YGLRPSALA 113
>NP_005802
          Length = 407

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   YGFRGDAL 8
           + F+GDAL
Sbjct: 117 HDFQGDAL 124
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.330    0.153    0.485 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 650,559
Number of extensions: 1154
Number of successful extensions: 91
Number of sequences better than 10000.0: 91
Number of HSP's gapped: 91
Number of HSP's successfully gapped: 91
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.0 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package