Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 21 175 NP_001263689 21 175 NP_001119584 21 175 NP_001119590 21 175 NP_001263690 21 175 NP_001119587 21 175 NP_001263626 21 175 NP_114480 19 869 NP_114481 19 869 NP_061737 19 869 NP_001836 17 4312 NP_066000 17 4312 XP_006713781 17 4312 NP_997196 16 7355 NP_536859 16 7355 NP_859052 16 7355 NP_002579 16 7355 NP_115778 16 7355 XP_006721755 16 7355 NP_689969 15 9605 NP_001272368 15 9605 NP_031361 15 9605 NP_001035100 15 9605 NP_001276903 15 9605 NP_061917 15 9605 XP_003960167 15 9605 XP_006720934 15 9605 XP_006714526 15 9605 XP_005265687 15 9605 XP_006712663 15 9605 XP_006712662 15 9605 XP_006712661 15 9605 XP_006712660 15 9605 XP_003846269 15 9605 XP_003846670 15 9605>NP_000537 Length = 393 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YFTLRIRGR 9 YFTL+IRGR Sbjct: 327 YFTLQIRGR 335>NP_001263689 Length = 354 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YFTLRIRGR 9 YFTL+IRGR Sbjct: 288 YFTLQIRGR 296>NP_001119584 Length = 393 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YFTLRIRGR 9 YFTL+IRGR Sbjct: 327 YFTLQIRGR 335>NP_001119590 Length = 354 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YFTLRIRGR 9 YFTL+IRGR Sbjct: 288 YFTLQIRGR 296>NP_001263690 Length = 354 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YFTLRIRGR 9 YFTL+IRGR Sbjct: 288 YFTLQIRGR 296>NP_001119587 Length = 261 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YFTLRIRGR 9 YFTL+IRGR Sbjct: 195 YFTLQIRGR 203>NP_001263626 Length = 234 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YFTLRIRGR 9 YFTL+IRGR Sbjct: 168 YFTLQIRGR 176>NP_114480 Length = 837 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 YFTLRIRGR 9 YF+L++RGR Sbjct: 178 YFSLQLRGR 186>NP_114481 Length = 750 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 YFTLRIRGR 9 YF+L++RGR Sbjct: 178 YFSLQLRGR 186>NP_061737 Length = 935 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 YFTLRIRGR 9 YF+L++RGR Sbjct: 178 YFSLQLRGR 186>NP_001836 Length = 1669 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YFTLRIRG 8 YF LR++G Sbjct: 534 YFDLRLKG 541>NP_066000 Length = 771 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YFTLRIR 7 Y+T+RIR Sbjct: 541 YYTMRIR 547>XP_006713781 Length = 771 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YFTLRIR 7 Y+T+RIR Sbjct: 541 YYTMRIR 547>NP_997196 Length = 984 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YFTLRIRGR 9 +FTLR++ + Sbjct: 239 HFTLRVKAK 247>NP_536859 Length = 624 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TLRIRGR 9 TLR RGR Sbjct: 616 TLRTRGR 622>NP_859052 Length = 698 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YFTLRIRGR 9 YF R+R R Sbjct: 679 YFFFRVRSR 687>NP_002579 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YFTLRIRGR 9 YF LR++ R Sbjct: 179 YFALRVQTR 187>NP_115778 Length = 863 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YFTLRIRGR 9 YF LR++ R Sbjct: 179 YFALRVQTR 187>XP_006721755 Length = 978 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YFTLRIRGR 9 +FTLR++ + Sbjct: 233 HFTLRVKAK 241>NP_689969 Length = 1708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LRIRGR 9 LR+RGR Sbjct: 13 LRVRGR 18>NP_001272368 Length = 1732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LRIRGR 9 LR+RGR Sbjct: 13 LRVRGR 18>NP_031361 Length = 1755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TLRIRGR 9 TLR+RG+ Sbjct: 1736 TLRLRGQ 1742>NP_001035100 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FTLRIR 7 FTLR+R Sbjct: 45 FTLRVR 50>NP_001276903 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YFTLRIRGR 9 Y LR+RG+ Sbjct: 565 YRVLRLRGK 573>NP_061917 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YFTLRIRG 8 YF RI+G Sbjct: 39 YFRARIKG 46>XP_003960167 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YFTLRIRGR 9 Y LR+RG+ Sbjct: 648 YRVLRLRGK 656>XP_006720934 Length = 296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FTLRIR 7 FTLR+R Sbjct: 29 FTLRVR 34>XP_006714526 Length = 1670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LRIRGR 9 LR+RGR Sbjct: 13 LRVRGR 18>XP_005265687 Length = 1758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TLRIRGR 9 TLR+RG+ Sbjct: 1739 TLRLRGQ 1745>XP_006712663 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YFTLRIRG 8 YF RI+G Sbjct: 95 YFRARIKG 102>XP_006712662 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YFTLRIRG 8 YF RI+G Sbjct: 95 YFRARIKG 102>XP_006712661 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YFTLRIRG 8 YF RI+G Sbjct: 95 YFRARIKG 102>XP_006712660 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YFTLRIRG 8 YF RI+G Sbjct: 95 YFRARIKG 102>XP_003846269 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YFTLRIRGR 9 Y LR+RG+ Sbjct: 648 YRVLRLRGK 656>XP_003846670 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YFTLRIRGR 9 Y LR+RG+ Sbjct: 655 YRVLRLRGK 663Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.349 0.164 0.517 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 426,968 Number of extensions: 696 Number of successful extensions: 35 Number of sequences better than 10000.0: 35 Number of HSP's gapped: 35 Number of HSP's successfully gapped: 35 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |