Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 19 665 NP_996844 18 1935 XP_005254439 18 1935 XP_006720568 18 1935 XP_005254438 18 1935 NP_002335 18 1935 NP_001244211 17 3301 NP_078807 17 3301 NP_001240744 17 3301 NP_001240745 17 3301 NP_001244210 17 3301 NP_689596 17 3301 NP_001098047 17 3301 NP_060456 17 3301 XP_005256766 17 3301 XP_006716723 17 3301 XP_006716722 17 3301 XP_006716721 17 3301 NP_000085 16 5631 NP_780775 16 5631 NP_001230199 16 5631 NP_055176 16 5631 NP_001006635 16 5631 NP_060524 16 5631 NP_001230200 16 5631 XP_006721123 16 5631 XP_006721122 16 5631 XP_005255471 16 5631 XP_006721121 16 5631 XP_005255470 16 5631 XP_006721120 16 5631 NP_008986 16 7355 NP_056517 16 7355 NP_114409 16 7355 NP_006865 16 7355 NP_001263388 16 7355 NP_001263387 16 7355 NP_001263386 16 7355 NP_071373 16 7355 NP_973728 16 7355 NP_060382 16 7355 NP_001158608 16 7355 XP_006717660 16 7355 XP_005266015 16 7355 XP_005263140 16 7355 XP_006714193 16 7355 XP_005262863 16 7355 XP_006714192 16 7355 XP_005262862 16 7355 XP_006714191 16 7355 XP_005262861 16 7355 XP_005262860 16 7355 NP_150597 16 7355 NP_001128302 15 9605 NP_060121 15 9605 NP_001128303 15 9605 NP_001128304 15 9605 NP_997299 15 9605 NP_001138669 15 9605 NP_002514 15 9605 NP_037422 15 9605 NP_001186125 15 9605 NP_057640 15 9605 NP_219483 15 9605 XP_005276416 15 9605 XP_005260215 15 9605 XP_005260214 15 9605 XP_005267096 15 9605 XP_006715570 15 9605 NP_003202 15 9605>NP_004295 Length = 1620 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 V VKTLPEV Sbjct: 1147 VAVKTLPEV 1155>NP_996844 Length = 803 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 V +KTLPE+ Sbjct: 480 VAIKTLPEL 488>XP_005254439 Length = 475 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 V +KTLPE+ Sbjct: 152 VAIKTLPEL 160>XP_006720568 Length = 771 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 V +KTLPE+ Sbjct: 448 VAIKTLPEL 456>XP_005254438 Length = 819 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 V +KTLPE+ Sbjct: 496 VAIKTLPEL 504>NP_002335 Length = 864 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 V +KTLPE+ Sbjct: 541 VAIKTLPEL 549>NP_001244211 Length = 249 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VVVKTLPE 8 VVVK LPE Sbjct: 111 VVVKLLPE 118>NP_078807 Length = 445 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VVVKTLPE 8 VVVK LPE Sbjct: 36 VVVKELPE 43>NP_001240744 Length = 445 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VVVKTLPE 8 VVVK LPE Sbjct: 36 VVVKELPE 43>NP_001240745 Length = 445 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VVVKTLPE 8 VVVK LPE Sbjct: 36 VVVKELPE 43>NP_001244210 Length = 603 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VVVKTLPE 8 VVVK LPE Sbjct: 111 VVVKLLPE 118>NP_689596 Length = 885 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VVVKTLPE 8 VVVK LPE Sbjct: 111 VVVKLLPE 118>NP_001098047 Length = 448 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VVVKTLPE 8 VVVK LPE Sbjct: 36 VVVKDLPE 43>NP_060456 Length = 448 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VVVKTLPE 8 VVVK LPE Sbjct: 36 VVVKDLPE 43>XP_005256766 Length = 350 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VVVKTLPE 8 VVVK LPE Sbjct: 36 VVVKDLPE 43>XP_006716723 Length = 445 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VVVKTLPE 8 VVVK LPE Sbjct: 36 VVVKELPE 43>XP_006716722 Length = 445 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VVVKTLPE 8 VVVK LPE Sbjct: 36 VVVKELPE 43>XP_006716721 Length = 445 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VVVKTLPE 8 VVVK LPE Sbjct: 36 VVVKELPE 43>NP_000085 Length = 2944 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVVKTLPE 8 VVV+T PE Sbjct: 767 VVVRTAPE 774>NP_780775 Length = 1026 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VKTLPEV 9 VKT+PE+ Sbjct: 645 VKTVPEI 651>NP_001230199 Length = 1100 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VKTLPEV 9 VKT+PE+ Sbjct: 719 VKTVPEI 725>NP_055176 Length = 1100 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VKTLPEV 9 VKT+PE+ Sbjct: 719 VKTVPEI 725>NP_001006635 Length = 881 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 V+ KTLPE+ Sbjct: 229 VLEKTLPEM 237>NP_060524 Length = 803 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 V+ KTLPE+ Sbjct: 229 VLEKTLPEM 237>NP_001230200 Length = 911 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VKTLPEV 9 VKT+PE+ Sbjct: 719 VKTVPEI 725>XP_006721123 Length = 775 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 V+ KTLPE+ Sbjct: 229 VLEKTLPEM 237>XP_006721122 Length = 804 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 V+ KTLPE+ Sbjct: 152 VLEKTLPEM 160>XP_005255471 Length = 840 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 V+ KTLPE+ Sbjct: 229 VLEKTLPEM 237>XP_006721121 Length = 853 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 V+ KTLPE+ Sbjct: 229 VLEKTLPEM 237>XP_005255470 Length = 853 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 V+ KTLPE+ Sbjct: 229 VLEKTLPEM 237>XP_006721120 Length = 880 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 V+ KTLPE+ Sbjct: 228 VLEKTLPEM 236>NP_008986 Length = 1390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 VVV+ +PEV Sbjct: 1199 VVVQGIPEV 1207>NP_056517 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 +V KTLP+V Sbjct: 94 LVHKTLPDV 102>NP_114409 Length = 467 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VVKTLPEV 9 V KTLPE+ Sbjct: 206 VSKTLPEL 213>NP_006865 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 VV++T+P V Sbjct: 373 VVIQTIPTV 381>NP_001263388 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 VV++T+P V Sbjct: 332 VVIQTIPTV 340>NP_001263387 Length = 521 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 VV++T+P V Sbjct: 361 VVIQTIPTV 369>NP_001263386 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 VV++T+P V Sbjct: 344 VVIQTIPTV 352>NP_071373 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VVVKTLP 7 +V+KTLP Sbjct: 278 LVIKTLP 284>NP_973728 Length = 581 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 VV++T+P V Sbjct: 421 VVIQTIPTV 429>NP_060382 Length = 1022 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KTLPEV 9 KTLPE+ Sbjct: 374 KTLPEI 379>NP_001158608 Length = 986 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KTLPEV 9 KTLPE+ Sbjct: 374 KTLPEI 379>XP_006717660 Length = 1369 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 VVV+ +PEV Sbjct: 1178 VVVQGIPEV 1186>XP_005266015 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VVVKTLP 7 +V+KTLP Sbjct: 278 LVIKTLP 284>XP_005263140 Length = 1034 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KTLPEV 9 KTLPE+ Sbjct: 386 KTLPEI 391>XP_006714193 Length = 514 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 VV++T+P V Sbjct: 354 VVIQTIPTV 362>XP_005262863 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 VV++T+P V Sbjct: 317 VVIQTIPTV 325>XP_006714192 Length = 489 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 VV++T+P V Sbjct: 329 VVIQTIPTV 337>XP_005262862 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 VV++T+P V Sbjct: 392 VVIQTIPTV 400>XP_006714191 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 VV++T+P V Sbjct: 404 VVIQTIPTV 412>XP_005262861 Length = 581 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 VV++T+P V Sbjct: 421 VVIQTIPTV 429>XP_005262860 Length = 593 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 VV++T+P V Sbjct: 433 VVIQTIPTV 441>NP_150597 Length = 103 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 VVKTLPE 8 ++KTLP+ Sbjct: 76 IIKTLPQ 82>NP_001128302 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VVKTLPEV 9 V+KT+P++ Sbjct: 129 VIKTVPQL 136>NP_060121 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VVKTLPEV 9 V+KT+P++ Sbjct: 129 VIKTVPQL 136>NP_001128303 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VVKTLPEV 9 V+KT+P++ Sbjct: 129 VIKTVPQL 136>NP_001128304 Length = 1053 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VVKTLPEV 9 V+KT+P++ Sbjct: 129 VIKTVPQL 136>NP_997299 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVKTLPEV 9 V+KT PE+ Sbjct: 317 VLKTFPEM 324>NP_001138669 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVKTLPEV 9 V+KT PE+ Sbjct: 317 VLKTFPEM 324>NP_002514 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVKTLPEV 9 + KTLPE+ Sbjct: 240 IKKTLPEL 247>NP_037422 Length = 205 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 VVVKTL ++ Sbjct: 46 VVVKTLEQL 54>NP_001186125 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVKTLPEV 9 +VKT P+V Sbjct: 72 IVKTAPKV 79>NP_057640 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 VVVKTL ++ Sbjct: 46 VVVKTLEQL 54>NP_219483 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVKTLPEV 9 +VKT P+V Sbjct: 47 IVKTAPKV 54>XP_005276416 Length = 1583 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVKTLPEV 9 V+KT PE+ Sbjct: 306 VLKTFPEM 313>XP_005260215 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVKTLPEV 9 +VKT P+V Sbjct: 47 IVKTAPKV 54>XP_005260214 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVKTLPEV 9 +VKT P+V Sbjct: 47 IVKTAPKV 54>XP_005267096 Length = 1168 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VVKTLPEV 9 V+KT+P++ Sbjct: 129 VIKTVPQL 136>XP_006715570 Length = 1179 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VVKTLPEV 9 V+KT+P++ Sbjct: 129 VIKTVPQL 136>NP_003202 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VVVKTLPEV 9 ++ KTLP++ Sbjct: 119 LLTKTLPDI 127Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.136 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 661,215 Number of extensions: 1057 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |