Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000542 20 509 NP_937799 20 509 NP_002931 17 3301 NP_001035809 17 3301 NP_001180215 17 4312 NP_036369 17 4312 NP_085096 17 4312 NP_061092 17 4312 NP_001032728 17 4312 XP_006723174 17 4312 XP_005247642 17 4312 XP_005247641 17 4312 XP_005247640 17 4312 XP_005247639 17 4312 NP_001191355 16 5631 NP_055205 16 5631 NP_001012982 16 5631 NP_002765 16 5631 NP_057624 16 5631 NP_002305 16 5631 NP_001139280 16 7355 NP_000623 16 7355 NP_001276332 16 7355 NP_001276333 16 7355 NP_001276334 16 7355 NP_071757 16 7355 NP_001979 16 7355 NP_775872 16 7355 NP_055401 16 7355 NP_055045 16 7355 NP_001093120 16 7355 NP_001247432 16 7355 NP_001247431 16 7355 XP_006721108 16 7355 XP_006718008 16 7355 XP_005270098 16 7355 XP_005270092 16 7355 XP_006718007 16 7355 NP_001035351 15 9605 NP_001035350 15 9605 NP_002099 15 9605 NP_569733 15 9605 NP_904324 15 9605 NP_001245262 15 9605 XP_006719745 15 9605 XP_006719744 15 9605 XP_005254044 15 9605 XP_005268878 15 9605 XP_006719294 15 9605 XP_005262843 15 9605 XP_005262842 15 9605 NP_001138947 15 9605 NP_005459 15 9605>NP_000542 Length = 213 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VVRSLVKPD 9 VVRSLVKP+ Sbjct: 165 VVRSLVKPE 173>NP_937799 Length = 172 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VVRSLVKPD 9 VVRSLVKP+ Sbjct: 124 VVRSLVKPE 132>NP_002931 Length = 599 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRSLVKPD 9 +RSL+ PD Sbjct: 259 IRSLINPD 266>NP_001035809 Length = 599 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRSLVKPD 9 +RSL+ PD Sbjct: 259 IRSLINPD 266>NP_001180215 Length = 234 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLVKPD 9 +SLVKPD Sbjct: 188 QSLVKPD 194>NP_036369 Length = 389 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLVKPD 9 +SLVKPD Sbjct: 225 QSLVKPD 231>NP_085096 Length = 352 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLVKPD 9 +SLVKPD Sbjct: 188 QSLVKPD 194>NP_061092 Length = 379 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRSLVKP 8 +RSL+KP Sbjct: 95 IRSLIKP 101>NP_001032728 Length = 329 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRSLVKP 8 +RSL+KP Sbjct: 95 IRSLIKP 101>XP_006723174 Length = 352 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLVKPD 9 +SLVKPD Sbjct: 188 QSLVKPD 194>XP_005247642 Length = 344 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRSLVKP 8 +RSL+KP Sbjct: 95 IRSLIKP 101>XP_005247641 Length = 345 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRSLVKP 8 +RSL+KP Sbjct: 95 IRSLIKP 101>XP_005247640 Length = 360 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRSLVKP 8 +RSL+KP Sbjct: 95 IRSLIKP 101>XP_005247639 Length = 394 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRSLVKP 8 +RSL+KP Sbjct: 95 IRSLIKP 101>NP_001191355 Length = 613 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRSLVKPD 9 +RSL KPD Sbjct: 461 LRSLKKPD 468>NP_055205 Length = 910 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVRSLVKPD 9 VVR+L+ PD Sbjct: 207 VVRALLLPD 215>NP_001012982 Length = 244 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVRSLVKPD 9 VVR+++ PD Sbjct: 89 VVRAVIHPD 97>NP_002765 Length = 244 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVRSLVKPD 9 VVR+++ PD Sbjct: 89 VVRAVIHPD 97>NP_057624 Length = 423 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VVRSLVKPD 9 +VRSL PD Sbjct: 219 IVRSLCLPD 227>NP_002305 Length = 647 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRSLVKPD 9 +RSL KPD Sbjct: 495 LRSLKKPD 502>NP_001139280 Length = 1153 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RSLVKP 8 RSLVKP Sbjct: 212 RSLVKP 217>NP_000623 Length = 1152 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RSLVKP 8 RSLVKP Sbjct: 212 RSLVKP 217>NP_001276332 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVRSLVKP 8 V+R+L KP Sbjct: 953 VIRALAKP 960>NP_001276333 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVRSLVKP 8 V+R+L KP Sbjct: 837 VIRALAKP 844>NP_001276334 Length = 1030 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVRSLVKP 8 V+R+L KP Sbjct: 996 VIRALAKP 1003>NP_071757 Length = 1030 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVRSLVKP 8 V+R+L KP Sbjct: 996 VIRALAKP 1003>NP_001979 Length = 2033 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRSLVKPD 9 +RSLV PD Sbjct: 196 LRSLVGPD 203>NP_775872 Length = 440 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRSLVKP 8 +RSL+KP Sbjct: 395 IRSLLKP 401>NP_055401 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VRSLVKPD 9 +RSL++PD Sbjct: 297 LRSLLEPD 304>NP_055045 Length = 627 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VVRSLVKPD 9 VVR +KPD Sbjct: 350 VVREELKPD 358>NP_001093120 Length = 409 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRSLVKP 8 +RSL+KP Sbjct: 364 IRSLLKP 370>NP_001247432 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VVRSLVKPD 9 VVR +KPD Sbjct: 11 VVREELKPD 19>NP_001247431 Length = 589 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VVRSLVKPD 9 VVR +KPD Sbjct: 312 VVREELKPD 320>XP_006721108 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RSLVKP 8 RSLVKP Sbjct: 212 RSLVKP 217>XP_006718008 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVRSLVKP 8 V+R+L KP Sbjct: 632 VIRALAKP 639>XP_005270098 Length = 829 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVRSLVKP 8 V+R+L KP Sbjct: 795 VIRALAKP 802>XP_005270092 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVRSLVKP 8 V+R+L KP Sbjct: 838 VIRALAKP 845>XP_006718007 Length = 1050 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVRSLVKP 8 V+R+L KP Sbjct: 1016 VIRALAKP 1023>NP_001035351 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVRSLVKP 8 V+RS VKP Sbjct: 201 VIRSGVKP 208>NP_001035350 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVRSLVKP 8 V+RS VKP Sbjct: 201 VIRSGVKP 208>NP_002099 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VVRSLVKP 8 +VRS+V+P Sbjct: 582 LVRSVVRP 589>NP_569733 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RSLVKPD 9 RS++KP+ Sbjct: 904 RSIIKPE 910>NP_904324 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RSLVKPD 9 RS++KP+ Sbjct: 904 RSIIKPE 910>NP_001245262 Length = 449 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VVRSLVKP 8 +VRS+V+P Sbjct: 374 LVRSVVRP 381>XP_006719745 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RSLVKPD 9 RS++KP+ Sbjct: 904 RSIIKPE 910>XP_006719744 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RSLVKPD 9 RS++KP+ Sbjct: 904 RSIIKPE 910>XP_005254044 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RSLVKPD 9 RS++KP+ Sbjct: 904 RSIIKPE 910>XP_005268878 Length = 556 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VVRSLVKP 8 +VRS+V+P Sbjct: 481 LVRSVVRP 488>XP_006719294 Length = 2348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRSLVKP 8 +RSLV+P Sbjct: 582 IRSLVEP 588>XP_005262843 Length = 765 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVRSLVKP 8 V+RS VKP Sbjct: 201 VIRSGVKP 208>XP_005262842 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVRSLVKP 8 V+RS VKP Sbjct: 201 VIRSGVKP 208>NP_001138947 Length = 2351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRSLVKP 8 +RSLV+P Sbjct: 582 IRSLVEP 588>NP_005459 Length = 740 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VVRSLVKPD 9 ++R V+PD Sbjct: 352 IIRGAVEPD 360Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.139 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 457,160 Number of extensions: 583 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |