Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 20 390 NP_005913 20 390 XP_005267046 20 390 XP_005267045 20 390 NP_077719 17 4312 NP_001186978 17 4312 XP_005270959 17 4312 XP_005270958 17 4312 XP_006710730 17 4312 NP_714915 16 5631 NP_001135773 16 5631 XP_006716750 16 5631 XP_006716749 16 5631 XP_006716748 16 5631 NP_001743 16 7355 NP_002572 16 7355 NP_057287 16 7355 NP_077747 16 7355 NP_001035723 16 7355 NP_004090 16 7355 NP_001257456 16 7355 NP_001257455 16 7355 XP_005250066 16 7355 XP_005250064 16 7355 XP_005250063 16 7355 XP_005250062 16 7355 XP_005250061 16 7355 XP_006716084 16 7355 XP_005250060 16 7355 XP_005250059 16 7355 NP_001030025 15 9605 NP_000319 15 9605 NP_115518 15 9605 NP_057405 15 9605 XP_005272690 15 9605 XP_006724601 15 9605 XP_006722394 15 9605 XP_005258167 15 9605 XP_006722393 15 9605 XP_006722392 15 9605 XP_006722391 15 9605 XP_006722390 15 9605 XP_005258166 15 9605 XP_006722389 15 9605 XP_005258165 15 9605 XP_005258164 15 9605>NP_006715 Length = 1558 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VVGIKNLSD 9 V+GIKNLSD Sbjct: 413 VLGIKNLSD 421>NP_005913 Length = 1608 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VVGIKNLSD 9 V+GIKNLSD Sbjct: 413 VLGIKNLSD 421>XP_005267046 Length = 1554 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VVGIKNLSD 9 V+GIKNLSD Sbjct: 413 VLGIKNLSD 421>XP_005267045 Length = 1604 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VVGIKNLSD 9 V+GIKNLSD Sbjct: 413 VLGIKNLSD 421>NP_077719 Length = 2471 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VGIKNLS 8 VG+KNLS Sbjct: 1735 VGLKNLS 1741>NP_001186978 Length = 2715 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VVGIKNLSD 9 VVG K LSD Sbjct: 1491 VVGSKGLSD 1499>XP_005270959 Length = 2432 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VGIKNLS 8 VG+KNLS Sbjct: 1696 VGLKNLS 1702>XP_005270958 Length = 2432 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VGIKNLS 8 VG+KNLS Sbjct: 1696 VGLKNLS 1702>XP_006710730 Length = 2432 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VGIKNLS 8 VG+KNLS Sbjct: 1696 VGLKNLS 1702>NP_714915 Length = 995 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVGIKNLS 8 VVG KNL+ Sbjct: 701 VVGFKNLA 708>NP_001135773 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVGIKNLS 8 VVG KNL+ Sbjct: 620 VVGFKNLA 627>XP_006716750 Length = 795 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVGIKNLS 8 VVG KNL+ Sbjct: 501 VVGFKNLA 508>XP_006716749 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVGIKNLS 8 VVG KNL+ Sbjct: 600 VVGFKNLA 607>XP_006716748 Length = 980 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVGIKNLS 8 VVG KNL+ Sbjct: 686 VVGFKNLA 693>NP_001743 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GIKNLS 8 GIKNLS Sbjct: 241 GIKNLS 246>NP_002572 Length = 1627 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VVGIKNLSD 9 VVGI +SD Sbjct: 154 VVGIHTISD 162>NP_057287 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVGIKNLSD 9 +VGI +LSD Sbjct: 541 IVGIISLSD 549>NP_077747 Length = 328 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVGIKNLSD 9 +VGI +LSD Sbjct: 300 IVGIISLSD 308>NP_001035723 Length = 525 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVGIKNLSD 9 +VGI +LSD Sbjct: 497 IVGIISLSD 505>NP_004090 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVGIKNLS 8 V+G KNLS Sbjct: 154 VLGTKNLS 161>NP_001257456 Length = 168 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVGIKNLS 8 V+G KNLS Sbjct: 154 VLGTKNLS 161>NP_001257455 Length = 197 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVGIKNLS 8 V+G KNLS Sbjct: 154 VLGTKNLS 161>XP_005250066 Length = 358 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVGIKNLSD 9 +VGI +LSD Sbjct: 280 IVGIISLSD 288>XP_005250064 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVGIKNLSD 9 +VGI +LSD Sbjct: 416 IVGIISLSD 424>XP_005250063 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVGIKNLSD 9 +VGI +LSD Sbjct: 417 IVGIISLSD 425>XP_005250062 Length = 568 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVGIKNLSD 9 +VGI +LSD Sbjct: 540 IVGIISLSD 548>XP_005250061 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVGIKNLSD 9 +VGI +LSD Sbjct: 497 IVGIISLSD 505>XP_006716084 Length = 615 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVGIKNLSD 9 +VGI +LSD Sbjct: 537 IVGIISLSD 545>XP_005250060 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVGIKNLSD 9 +VGI +LSD Sbjct: 540 IVGIISLSD 548>XP_005250059 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVGIKNLSD 9 +VGI +LSD Sbjct: 541 IVGIISLSD 549>NP_001030025 Length = 1152 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VGIKNLSD 9 +G+KN+S+ Sbjct: 172 IGLKNVSN 179>NP_000319 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VGIKNLSD 9 +G+KN+S+ Sbjct: 172 IGLKNVSN 179>NP_115518 Length = 2537 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GIKNLSD 9 G+K LSD Sbjct: 1888 GVKKLSD 1894>NP_057405 Length = 479 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VVGIKNL 7 VVG++NL Sbjct: 119 VVGVENL 125>XP_005272690 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VGIKNLSD 9 +G+KN+S+ Sbjct: 172 IGLKNVSN 179>XP_006724601 Length = 1020 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VGIKNLSD 9 +G+KN+S+ Sbjct: 172 IGLKNVSN 179>XP_006722394 Length = 1845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GIKNLSD 9 G+K LSD Sbjct: 1195 GVKKLSD 1201>XP_005258167 Length = 1856 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GIKNLSD 9 G+K LSD Sbjct: 1206 GVKKLSD 1212>XP_006722393 Length = 2199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GIKNLSD 9 G+K LSD Sbjct: 1549 GVKKLSD 1555>XP_006722392 Length = 2444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GIKNLSD 9 G+K LSD Sbjct: 1794 GVKKLSD 1800>XP_006722391 Length = 2448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GIKNLSD 9 G+K LSD Sbjct: 1798 GVKKLSD 1804>XP_006722390 Length = 2467 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GIKNLSD 9 G+K LSD Sbjct: 1818 GVKKLSD 1824>XP_005258166 Length = 2468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GIKNLSD 9 G+K LSD Sbjct: 1818 GVKKLSD 1824>XP_006722389 Length = 2506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GIKNLSD 9 G+K LSD Sbjct: 1888 GVKKLSD 1894>XP_005258165 Length = 2534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GIKNLSD 9 G+K LSD Sbjct: 1884 GVKKLSD 1890>XP_005258164 Length = 2538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GIKNLSD 9 G+K LSD Sbjct: 1888 GVKKLSD 1894Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.139 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 451,987 Number of extensions: 776 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |